XLOC_002738 (ponzr10)


Basic Information

Item Value
gene id XLOC_002738
gene name ponzr10
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 22088465 ~ 22095505 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005086
GTCTGCTTTTACTTTCTTATGACAGTAAAAGAAGCGTTGAACTAGAAAGAGCAGTATCACTACAGTCACATAAAGATGGCGGCAGTAGTTGTGCAGCAGGTTCCCTCTAAACCTCAGGAAACTCTCTGGAATTCAGGAATATGTGACTGTTTCCAGGACTTAAACTCTTGCTGCTATGCGTACTGGTGCTGTCCATGTTTTGCCTGCTCCACTGCTGGTGAGTTTGGGGAGAGCACCTGTCTTCCTTTGGTGGACATACTGGGACCTGCTGTCATGGCCAGTTTTGGAGTTGCATTTTGTGTGCCACCTGTGACTATGTCATTGAGGGTGGCAATTCGACACAAATATAACATCAGGGGCAGTATCTGCAACGATATCGCCGTGTCTTGCTGCTGTGTTATGTGCTCATGGTGTCAGATGAACAGAGAAATTAAAGCACGCAAAAATGCACCAAACATGATATTGACCACACAACCGCTGGTTCAACAATCAACCACCACAACACAAGTGATCACTTCACAGCAGACGGTTGGAATGCCGGCAGCTCCTGCAGTCCAGATGGTGCCGGGTCAACCAGTTATTGCCAAAGTTGTTCAATAGAAAGTCATACTCAGGTGTGCATTACACGTAAATAATGTTGACACGTAATCCCTTTTGATCAATATTATAATATCTAATCAGCTTAATTAGAATAAAAGACGTATAAATTCCTTGGGTGAGTTTAAATAAGAAATGTCTTGGTATTGTTTACTCTTTCTGATTTTTCTATGATTGAGTCTGGTGatcagaaatatttaaaagatttaatattcaaataataaaaa

Function

symbol description
ponzr10 Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-081107-68 Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000087764

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005086 True 824 mRNA 0.41 4 22088465 22095505

Neighbor

gene id symbol gene type direction distance location
XLOC_002737 ugt5g2 coding downstream 1839 22082596 ~ 22086626 (-)
XLOC_002736 tlx3b coding downstream 31464 22051054 ~ 22057001 (-)
XLOC_002734 FO744833.2 coding downstream 133234 21913105 ~ 21955231 (-)
XLOC_002735 FO744833.1 coding downstream 147022 21938762 ~ 21941443 (-)
XLOC_002733 CR774179.5 coding downstream 181155 21861451 ~ 21907310 (-)
XLOC_002739 BX005027.3 coding upstream 1823 22097328 ~ 22106331 (-)
XLOC_002740 si:ch73-111e15.1 coding upstream 15337 22110842 ~ 22117121 (-)
XLOC_002741 ponzr2 coding upstream 28326 22123831 ~ 22127942 (-)
XLOC_002742 cldn7b coding upstream 49263 22144768 ~ 22150419 (-)
XLOC_002743 fgf11b coding upstream 66080 22161585 ~ 22249444 (-)
XLOC_002732 NA non-coding downstream 244602 21646154 ~ 21843863 (-)
XLOC_002731 NA non-coding downstream 438737 21627807 ~ 21649728 (-)
XLOC_002730 BX957322.2 non-coding downstream 515008 21570196 ~ 21573457 (-)
XLOC_002725 BX004800.2 non-coding downstream 1179909 20908442 ~ 20908556 (-)
XLOC_002724 NA non-coding downstream 1199705 20842918 ~ 20888760 (-)
XLOC_002744 BX005194.1 non-coding upstream 176284 22271789 ~ 22271903 (-)
XLOC_002745 NA non-coding upstream 385653 22481158 ~ 22491458 (-)
XLOC_002748 NA non-coding upstream 435280 22530785 ~ 22534924 (-)
XLOC_002749 NA non-coding upstream 458844 22554349 ~ 22567208 (-)
XLOC_002750 NA non-coding upstream 508768 22604273 ~ 22607715 (-)

Expression


Co-expression Network