G842335


Basic Information

Item Value
gene id G842335
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 76856457 ~ 76859965 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU958859
TCTGATAATGTATCTGTGACATGGTGGGATTCTGTAGCTGATGATGCTGCGACCTCCTCCCAGACTCTCgtgtttacagaacatttggTATTGTCTGATTAACATAGAGGTTCCTTCTCAGAGAAAGCCCGTTAGAAAACAAGTCTGCACTCCCATGCTGTTGTCTCCCTGTTGCAAATGTTTAGATCTGACGTAGTCACCGACTGCTCATGTCTTTCAGGAGGAAACCTCCTATGTACACAGGTGTTGGTGTTCAATGTTCAGTACCCATCACCGAGAAGCTGGACCACGTCACAGACCACGTCACAAACGGGTTCAACTGGACATCATCGTTATGAAGTCAAACGTGATCATTGTTGATTTATACAGACAACTGTTGTGTGCCGTGCGTCACAACATGTCACACGTAACACAAAACCACACGCTGTAAGCTGCTCATATCACAGCTATTTGGTCAAGAAGTTGGAAGCATCACGTCACAAGAAGTTCTACTTAAGGAACTCTGAATCTTTCACAGTAATAATCCATAGAATTTTTCAAGAGAAgtgcaatttaaaaaataaaaaaaattgtgctCAACTACAGTAGGGACATTAACATAATTAAACAACTACTCCCATTGATCATGTAACCTGAGGGAAATATTGGTTTGCTTTGTCAAAAAAAGTTTGAATTGATTGTTGTTGTCATGCAGCTTGGTTGTAAATACAAAATGGAGGAAGCAGAAAAGCTTTTTTTTAGTGCATGGCAGCATTTGGCAAAAGAGGAATAAAGAGAATACAATTCAGCCTAGCCTGGAGATCCAGACTGAATTCAGTTCCGTTTCACATGAAGAGATCCAGACTGAATTCAGTTCCGTTTCACATGAAGAGATCCAGACTGAATTCAGTTCCGTTTCACATGAAGAGATCCAGACTAAATTCAATTCCGTTTCACATGAAGAGATCCAGACTGAATTCAGTTCCGTTTCACATGAAGAGATCCAGACTGAATTCAGTTCCGTTTCACATGAAGAGATCCAGACTGGATTCAGTTCCGTTTCACATGAAGAGATCCAGACTGGATTCAGTTCCGTTTCACATGAAGAGATCCAGACTGGATTCAGTTCCGTTTCACATGAAGAGATCCAGACTGGATTTAGTTGCAACTGGTGTATGTCACaataccatatatatatatatatatattttttttttacctgaatgGGGTCCGCTCTTAAGTCCTTGAACAAAGATTGATTGCTTTAGTAGCTACTGTATAGCACAATATCTCTTTTAGAAAAGTGTCTAGGCATAGATGAGAATACAGCATGGAAAGCAATATTGAATATTTTCAGGAAAATACTGAACAGAAATGTATGTATTGCAGACTATGGGTTATGGGAATGTTGACAGGGTCGATTAAATTGAGATTAGCCTGGTACCAGATCTGTTTATGATGTTGCCGACTTGTCATTGGCTGAACATGaaaatgtttggcatgacaattccATTAAGAGTTGGCAGGAGAGCAGACTCAAACTGGCTCCCGGGCTAAACAGACTGTCTCCCGGGCTAAACAGACTGTCTCCCGGGCTAAACAGACTGTCTCCCGGGCTAAACAGACTGTCTCCCGGGCTAAACAGACTGTCTCCCGGGCTAAACAGACTGTCTCCCGGGCTAAACAGACTGTCTCCCGGGCTAAACAGACTGTCTCCCGGGCTAAACAGACTGGCTCCCAGGCTAAACAGACTGGCTTCCAGGCTAAACATACTGGCTCTCAGGCTAAACAGACTGGCTCTCAGGCTAAACAGACTGGCTCCCAGGCTAAACAGACTGGCTCCCAGGCTAAACAGACTGGCTCCCAGGCTAAACAGACTGGCTCCCAGGCTACTAAACAGACTGGCTCCCAGGCTACTAAACAGACTGGCTCCCAGGCTACTAAACAGACTGGCTCCCAGGCTACTAAACAGACTGGCTCCCAGGCTACTAAACAGACTGGCTCCCAGGCTACAGTGACTTGATTAATACCAGACTGAATTATGATGGACATGGACTTAAAACAGGAAAGTCAAGAAGACAGCATAGATTTGTTGCTATGGATGAAGGTAGATTTACCAGCAATACTTATCCATTCATCCAGTCCAGTTTTTTGGTCTGAGGATGGTCAATACCTGATTTCATATTTAATCTGGCTGGTCTCATGGTTCAATTCATGGTTCAATTCATGGAAAACTACGCATTATAAAAACATAATAGAATGTTTGCAGTAATGACCCCATGTtgtatttaaaaatgtaaaaaaaaaacatttataaatATTCTGATCACAAATCACATTCCCTTCATACCTCTCCACGACAACAGCAGGAAGTATGGGACAAAGAAATTATTGTGTAAATCAAAGTACATTTTCTATCTTGAGTTTTTTTTTTCAGTTGTTTTGAGTTTCAAAGAACAGGATATCAATTTAAAGATTCACGTTATAGCGCTTGTAACATTTAAAAGTCATTTGTGATTGAGACGACATAGGCAGTGTTTACCACATTGCCTTTATAAGGTGCATCTGAGCTGTCGGTtgcatggttttatatagggcaGCAGGTATCCTAAAGTAGGAGCGTTGGACCAGTAGcctaaaggtcgctggttcgaatatcCAAGCCAAATATTTTTCAGctatgtcgatgtgcccttgagcaaggcgcttaaccctaattgctcctgtaaattgctctggataagagcgtatgctaaattatcaacattttttaaaattaggTTATCCTCCTTTACCCAAGTGTCTCTATCCTGCTGCTCATCATAGATAAGAATATTGTGCTTGTTTTATTCAGTAGAACACCCggatcacatttttttttttttttggtttgggGTTAAAGGTCTGATTAGCTGAGAAGAGAAATTACGAACAGGTGATCTATGACATTGTCATTATCTGTGGGCTGGGCTCGGTGGGTTGTGGAAAGAATATAAGCACCCTTTGGTGCCACCTATTGGCACACTAGTGCAAGCAGCAGTCTGGAACGACACACCCCTTCGTGTTTGAAATGGAGCCAAAGGGATATAACATGACTGTTGTTCGTCCTGATTATGTGAAGCATCCTACAAGGACCGGTGGGTGATAGCTGGTATTGtgtcca

Function

NR:

description
PREDICTED: uncharacterized protein LOC106591781

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU958859 True 3142 TUCP 0.42 5 76856457 76859965

Neighbor

gene id symbol gene type direction distance location
zgc:113363 LOC106572953 coding downstream 187322 76656942 ~ 76669135 (-)
mecp2 LOC106572920 coding downstream 538873 76309986 ~ 76317584 (-)
hcfc1b LOC106572922 coding downstream 573280 76210034 ~ 76283177 (-)
cdk20 cdk20 coding downstream 658491 76179039 ~ 76197966 (-)
hdac6 hdac6 coding downstream 687086 76127987 ~ 76169371 (-)
LOC110531297 tkt coding upstream 350455 77210420 ~ 77227773 (-)
lrrc23 lrrc23 coding upstream 378865 77238830 ~ 77253709 (-)
LOC110532861 LOC105006798 coding upstream 407396 77267361 ~ 77355158 (-)
LOC110529252 LOC106592002 coding upstream 498063 77358028 ~ 77368083 (-)
LOC110531295 LOC106572974 coding upstream 594507 77454472 ~ 77544388 (-)
G842367 NA non-coding downstream 23521 76831511 ~ 76832936 (-)
G842340 NA non-coding downstream 66669 76788898 ~ 76789788 (-)
G842321 NA non-coding downstream 99651 76756565 ~ 76756806 (-)
G842318 NA non-coding downstream 101315 76743823 ~ 76755142 (-)
G842320 NA non-coding downstream 102240 76752266 ~ 76754217 (-)
G842408 NA non-coding upstream 63169 76923134 ~ 76923473 (-)
G842412 NA non-coding upstream 81190 76941155 ~ 76941393 (-)
G842435 NA non-coding upstream 142695 77002660 ~ 77002873 (-)
G842438 NA non-coding upstream 156950 77016915 ~ 77017163 (-)
G842440 NA non-coding upstream 160829 77020794 ~ 77021174 (-)
G842232 aprin other downstream 220821 76625619 ~ 76635636 (-)
G842035 LOC106572932 other downstream 826525 76023343 ~ 76029932 (-)
G841224 NA other downstream 1192177 75659713 ~ 75664280 (-)
LOC110531287 LOC106572946 other downstream 1350979 75421476 ~ 75625131 (-)
G842449 NA other upstream 182624 77042589 ~ 77043395 (-)
G842543 NA other upstream 505054 77365019 ~ 77365360 (-)
G842858 NA other upstream 904136 77764101 ~ 77764737 (-)
G842859 NA other upstream 906346 77766311 ~ 77766840 (-)

Expression


Co-expression Network