XLOC_002739 (BX005027.3)


Basic Information

Item Value
gene id XLOC_002739
gene name BX005027.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 22097328 ~ 22106331 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005087
GCATTTTCTGTGGTCAAGTAAACGTATATAGTTTGCTGTTTTCTTGTTTTGTAGTGAAACCTTGCACATATAATTTTGcccattattattttcttttgacaaaaaaaaggaGCGTTGAACTTGAAAGAGCAGTACCAGTAGTCACATCAGTATGGCGGTTGTAGTTGTGCAGGATCCCAATAAGGAAACGAATTGGAGTTCAAATCTATGTTCCTGTTGCCAGGACTTAAACTCCTGCTGCTATGCATACTGGTGCTGTCCGTGTTTTGCCTGCACCACTACTAAAATGTTTGGGGAGAGCAGATGTCTGCCTCTGGTGGATATACTAGGACCTGCTGTCATGGGCAATTTCGGAATTGCAATTTGTGTGCCACCTGTGACTTTGTCATTGAGAGTGGCAATGCGACACAAATATAAAATCAAGGGCAGTATCTGCAACGATATCGCCGTGTCTTGCTGCTGTGTTATGTGCTCATGGTGCCAGATGCACAGAGAAATCAAAGCACGCAATAATAAGCCAGCAAACATGGTATTGGTCACACAACAACCACAGGTTCAACAAACAACCACCACAACACAAGTGATCACTTCACAGCAGACAATTGGAATGGCGGCTCCAGTTATCACCACAGTTGTTCAATAAAAAGTCCTACTCAGATGTGCATTACacctaatgatgatgatgatacgcAAAGCTTTTAGATCGATATTATAATATCTAATCTGCTTAATCAGAATAAGACATATAAATTGCTTGGGTGAATTTTAATAGGAAATGTCTTGATATTGCTTACTCTGTGATTTTTCCATGATTGAAAAGGTAATCAGAAATATTAAAATGACTTAATAttcaaatagtaaaaaaatacatctgaGTAAAAATGATAAAAGAAGTTTTTTCTTACACAGTTCTTGAGGTTGTTACATGAAGGATGTGTCTCAAACTTCcctttcttttacattttaacagATGTCAATATCTGTAATGATCATTCACATGGATCTGTAAATTCATTTTAGGAGttttgaagttttattttttagactTATATTTCTTGCAATTTTAAGTTTATAGGCAATCTTGCCATTTTTAATAACTCAAAAGAGTGTAATGTGAACTTTTAAACTTGATAATCTAACAAAACAGTCCATAACTATATCAGTTCGtgtaacagttttaaaaagttcaaaagGAGAAGTTGGGAGAGTTAGTTTCAGAGTTAGGCCGTTAATTAACTTAAGTTAAGATAGGAACTCTATTTTACAATTTGAATCAAACTCAGAAATATTAGTTCTTAAAATTTAATTAGAGTCTTGTCTCTTAACAGTCTGTTTCTTTAAAGCTGTGTTTATGTTTACTCTTTGCAAAATGCTGTATGAATGAaaagtttttgttcttttttttttcagttttactcaattcaacaataaaaatgatgctacaaaaagtcatgacaacatgaTTTTGTCACATTTTTGATAATCAGGTTTCGGCTAAACCAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000109946

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005087 True 1503 mRNA 0.34 4 22097328 22106331

Neighbor

gene id symbol gene type direction distance location
XLOC_002738 ponzr10 coding downstream 1823 22088465 ~ 22095505 (-)
XLOC_002737 ugt5g2 coding downstream 10702 22082596 ~ 22086626 (-)
XLOC_002736 tlx3b coding downstream 40327 22051054 ~ 22057001 (-)
XLOC_002734 FO744833.2 coding downstream 142097 21913105 ~ 21955231 (-)
XLOC_002735 FO744833.1 coding downstream 155885 21938762 ~ 21941443 (-)
XLOC_002740 si:ch73-111e15.1 coding upstream 4511 22110842 ~ 22117121 (-)
XLOC_002741 ponzr2 coding upstream 17500 22123831 ~ 22127942 (-)
XLOC_002742 cldn7b coding upstream 38437 22144768 ~ 22150419 (-)
XLOC_002743 fgf11b coding upstream 55254 22161585 ~ 22249444 (-)
XLOC_002744 BX005194.1 coding upstream 165458 22271789 ~ 22271903 (-)
XLOC_002732 NA non-coding downstream 253465 21646154 ~ 21843863 (-)
XLOC_002731 NA non-coding downstream 447600 21627807 ~ 21649728 (-)
XLOC_002730 BX957322.2 non-coding downstream 523871 21570196 ~ 21573457 (-)
XLOC_002725 BX004800.2 non-coding downstream 1188772 20908442 ~ 20908556 (-)
XLOC_002724 NA non-coding downstream 1208568 20842918 ~ 20888760 (-)
XLOC_002745 NA non-coding upstream 374827 22481158 ~ 22491458 (-)
XLOC_002748 NA non-coding upstream 424454 22530785 ~ 22534924 (-)
XLOC_002749 NA non-coding upstream 448018 22554349 ~ 22567208 (-)
XLOC_002750 NA non-coding upstream 497942 22604273 ~ 22607715 (-)

Expression


Co-expression Network