G842655



Basic Information


Item Value
gene id G842655
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 77545779 ~ 77546148 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU959284
AGTGTCCATGTATggcccagagtcgcctcttcactgttgacgttgagactggacagaggaactctgcctagaagtccagcatcccagagtcgcctcttcactgttgacgttgagactggacagaggaactctgcctagaagtccagcatcccagagtcgcctcttcactgttgacgttgagactggacagaggaactctgctctgttttgtgaagggagtagtacacagcgttgtgcaagatcttgagtttcttggcaatttctcacatggaatagccttcatttctcagaacaaggatAGACTGACGAGTATCACAAGGAAGCGcgttgtttctggtcattttgagcctgtaatcgaacccacaaatgc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU959284 True 370 lncRNA 0.49 1 77545779 77546148

Neighbor


gene id symbol gene type direction distance location
LOC110531295 LOC106572974 coding downstream 1391 77454472 ~ 77544388 (-)
LOC110529252 LOC106592002 coding downstream 177696 77358028 ~ 77368083 (-)
LOC110532861 LOC105006798 coding downstream 190621 77267361 ~ 77355158 (-)
lrrc23 lrrc23 coding downstream 292070 77238830 ~ 77253709 (-)
LOC110531297 tkt coding downstream 318006 77210420 ~ 77227773 (-)
LOC110531298 LOC106572998 coding upstream 97928 77644076 ~ 77693050 (-)
ngfa LOC106592688 coding upstream 151952 77698100 ~ 77725335 (-)
zgc:194242 NA coding upstream 301145 77847293 ~ 77854016 (-)
LOC110532870 NA coding upstream 507051 78053199 ~ 78058388 (-)
etv7 LOC106572981 coding upstream 534248 78080396 ~ 78105379 (-)
G842639 NA non-coding downstream 24005 77521491 ~ 77521774 (-)
G842619 NA non-coding downstream 35388 77487219 ~ 77510391 (-)
G842620 NA non-coding downstream 38586 77486491 ~ 77507193 (-)
G842614 NA non-coding downstream 63569 77481704 ~ 77482210 (-)
G842561 NA non-coding downstream 94399 77451173 ~ 77451380 (-)
G842660 NA non-coding upstream 8359 77554507 ~ 77554832 (-)
G842672 NA non-coding upstream 24316 77570464 ~ 77571131 (-)
G842675 NA non-coding upstream 26589 77572737 ~ 77573642 (-)
G842796 NA non-coding upstream 37515 77583663 ~ 77583907 (-)
G842799 NA non-coding upstream 53989 77600137 ~ 77600376 (-)
G842543 NA other downstream 180419 77365019 ~ 77365360 (-)
G842449 NA other downstream 502384 77042589 ~ 77043395 (-)
G842335 NA other downstream 685814 76856457 ~ 76859965 (-)
zgc:113363 LOC106572953 other downstream 882720 76656942 ~ 76669135 (-)
G842858 NA other upstream 217953 77764101 ~ 77764737 (-)
G842859 NA other upstream 220163 77766311 ~ 77766840 (-)
G842978 NA other upstream 400000 77946148 ~ 77946428 (-)
G843107 NA other upstream 535000 78081148 ~ 78081551 (-)
G843375 NA other upstream 896078 78442226 ~ 78442622 (-)

Expression



Co-expression Network