G842675


Basic Information

Item Value
gene id G842675
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 77572737 ~ 77573642 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU959310
tagaataTAGAGCCTTATATTGTGATCAGTAGAatatagagccttatagtgtgatcagtagagccttatagtgtgatcagtagaacatagagccttatagtgtgatcagtagaacatagagccttatagtgtgatcagtagaacatagagccttatagtgtgatcagtagaacatagagccttatagtgtgatcagtagaacatagagccttatagtgtgatcagtagaacatagagccttatagtgtgatcagtagaacatagagccttatagtatgatcagtagagccttatagtgtgatcagtagaacatagagccttatagtgtgatcagtagaacatagtcttatagtgtgatcagtagaacatagagccttatggtgtgatcagtagaacatagagccttatagtgtgatcagtagagccttatagtgtgatcagtagaacacagagcctaatagtgtgatcagtagaacacagATCCTTATAGtttgatcagtagaacatagagccttatattgtgatcagtagaacatagagcctcataatgtgatcagtagaacacagAGCCTTATAGtttgatcagtagaacatagagccttatattgtgatcagtagaacatagagcctcataatgtgatcagtagaacacatagtcttatagtgtgatcagttgaacatagagccttatagtgtgatcagtataacacagaaccttatagtgtgatcagttgaacatagagccttataatgtgatcagtagagccttatagtgtgatcagtagaacacagAGCCTTCGCGAAATGCCACAAAGCAGGACGACATGTATCTTTAGACACTGGCAGTTGTCATAAGGTGTATCATTCAGAGAGCGAAGCCCTGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU959310 True 886 lncRNA 0.38 2 77572737 77573642

Neighbor

gene id symbol gene type direction distance location
LOC110531295 LOC106572974 coding downstream 28349 77454472 ~ 77544388 (-)
LOC110529252 LOC106592002 coding downstream 204654 77358028 ~ 77368083 (-)
LOC110532861 LOC105006798 coding downstream 217579 77267361 ~ 77355158 (-)
lrrc23 lrrc23 coding downstream 319028 77238830 ~ 77253709 (-)
LOC110531297 tkt coding downstream 344964 77210420 ~ 77227773 (-)
LOC110531298 LOC106572998 coding upstream 70434 77644076 ~ 77693050 (-)
ngfa LOC106592688 coding upstream 124458 77698100 ~ 77725335 (-)
zgc:194242 NA coding upstream 273651 77847293 ~ 77854016 (-)
LOC110532870 NA coding upstream 479557 78053199 ~ 78058388 (-)
etv7 LOC106572981 coding upstream 506754 78080396 ~ 78105379 (-)
G842672 NA non-coding downstream 1606 77570464 ~ 77571131 (-)
G842660 NA non-coding downstream 17905 77554507 ~ 77554832 (-)
G842655 NA non-coding downstream 26589 77545779 ~ 77546148 (-)
G842639 NA non-coding downstream 50963 77521491 ~ 77521774 (-)
G842619 NA non-coding downstream 62346 77487219 ~ 77510391 (-)
G842796 NA non-coding upstream 10021 77583663 ~ 77583907 (-)
G842799 NA non-coding upstream 26495 77600137 ~ 77600376 (-)
G842803 NA non-coding upstream 44277 77617919 ~ 77618428 (-)
G842795 NA non-coding upstream 64881 77638523 ~ 77644534 (-)
G842788 NA non-coding upstream 65145 77638787 ~ 77671981 (-)
G842543 NA other downstream 207377 77365019 ~ 77365360 (-)
G842449 NA other downstream 529342 77042589 ~ 77043395 (-)
G842335 NA other downstream 712772 76856457 ~ 76859965 (-)
zgc:113363 LOC106572953 other downstream 909678 76656942 ~ 76669135 (-)
G842858 NA other upstream 190459 77764101 ~ 77764737 (-)
G842859 NA other upstream 192669 77766311 ~ 77766840 (-)
G842978 NA other upstream 372506 77946148 ~ 77946428 (-)
G843107 NA other upstream 507506 78081148 ~ 78081551 (-)
G843375 NA other upstream 868584 78442226 ~ 78442622 (-)

Expression


Co-expression Network