Gene
RNA
| Item | Value |
|---|---|
| gene id | G842941 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 77925746 ~ 77930970 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| centrosomal protein of 83 kDa |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU959684 | False | 4845 | lncRNA | 0.39 | 4 | 77925746 | 77930970 |
| TU959686 | False | 4168 | lncRNA | 0.39 | 5 | 77925746 | 77930970 |
| TU959688 | False | 4257 | lncRNA | 0.39 | 4 | 77925746 | 77930970 |
| TU959682 | False | 3972 | lncRNA | 0.37 | 4 | 77926240 | 77930970 |
| TU959685 | False | 3845 | lncRNA | 0.38 | 4 | 77926240 | 77930970 |
| TU959689 | False | 3968 | lncRNA | 0.37 | 5 | 77926240 | 77930970 |
| TU959681 | False | 3953 | lncRNA | 0.37 | 5 | 77926330 | 77930970 |
| TU959683 | True | 4169 | lncRNA | 0.37 | 4 | 77926330 | 77930970 |
77,920,000
77,921,000
77,922,000
77,923,000
77,924,000
77,925,000
77,926,000
77,927,000
77,928,000
77,929,000
77,930,000
77,931,000
77,932,000
77,933,000
77,934,000
NC_048573.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110515359 | LOC104931868 | coding | upstream | 6858 | 77897489 ~ 77918888 (+) |
| LOC110531299 | LOC106572976 | coding | upstream | 298695 | 77626332 ~ 77627051 (+) |
| plxnb3 | NA | coding | upstream | 717542 | 76899869 ~ 77208204 (+) |
| abcd1 | LOC106572951 | coding | upstream | 1030097 | 76864306 ~ 76895649 (+) |
| LOC118966129 | NA | coding | upstream | 1061907 | 76862683 ~ 76863839 (+) |
| kcna2b | LOC106572997 | coding | downstream | 24240 | 77955210 ~ 77965341 (+) |
| LOC110531301 | LOC106572980 | coding | downstream | 110935 | 78041905 ~ 78044160 (+) |
| ube2t | ube2t | coding | downstream | 184180 | 78115150 ~ 78120960 (+) |
| LOC118966132 | LOC106572996 | coding | downstream | 338099 | 78269069 ~ 78284576 (+) |
| LOC110532862 | ikbkg | coding | downstream | 382491 | 78313461 ~ 78338144 (+) |
| G842947 | NA | non-coding | upstream | 16165 | 77908047 ~ 77909581 (+) |
| G842892 | NA | non-coding | upstream | 65630 | 77859869 ~ 77860116 (+) |
| G842756 | NA | non-coding | upstream | 139492 | 77778064 ~ 77786254 (+) |
| G842753 | NA | non-coding | upstream | 153822 | 77771629 ~ 77771924 (+) |
| G842751 | NA | non-coding | upstream | 158886 | 77765755 ~ 77766860 (+) |
| G842953 | NA | non-coding | downstream | 8348 | 77939318 ~ 77939557 (+) |
| G842972 | NA | non-coding | downstream | 10844 | 77941814 ~ 77942030 (+) |
| G842975 | NA | non-coding | downstream | 13709 | 77944679 ~ 77944967 (+) |
| G842977 | NA | non-coding | downstream | 15145 | 77946115 ~ 77946339 (+) |
| G842979 | NA | non-coding | downstream | 15647 | 77946617 ~ 77946857 (+) |
| G842693 | NA | other | upstream | 282410 | 77638751 ~ 77671965 (+) |
| G842670 | LOC106572965 | other | upstream | 349671 | 77569415 ~ 77576075 (+) |
| G841914 | NA | other | upstream | 654579 | 77270785 ~ 77271167 (+) |
| G841797 | NA | other | upstream | 1048873 | 76875909 ~ 76876873 (+) |
| G843055 | NA | other | downstream | 145067 | 78076037 ~ 78083764 (+) |
| LOC110516429 | LOC100380643 | other | downstream | 678911 | 78553341 ~ 78732483 (+) |
| G843440 | NA | other | downstream | 731012 | 78661982 ~ 78662292 (+) |
| G843633 | NA | other | downstream | 917320 | 78848290 ~ 78852052 (+) |
| G843741 | NA | other | downstream | 1125664 | 79056634 ~ 79057069 (+) |
