G843691


Basic Information

Item Value
gene id G843691
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 78960553 ~ 78961975 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU960638
ACCTGGGTGTGGGGATGCCAGTGGCCTTGCAGAGCAGCATGATATTGTTAATGGTAGGGTATACCTGGGTGTGGGGGTGGCCTTGCAGAGCAGCATGACATTGTTAATGGTAGGGTATACCTGGGTGTGGGGCTTGCCTTGCAGAGCAGCATGATATTGTTAATGGTAGGGTATACCTGGGTGTGGGGATGCCAGTGGCCTTGCAGAGCAGCATGATATTGTTAATGGTAGGGTATACCTGGGTGTGGGGATGCCAGTGGCCTTGCAGAGCAGCATGATATTGTTAATGGTAGGGTATACCTGGGTGTGGGGATGCCAGTGGCCTTGCAGAGCAGCATGACATTGTTAATGGTAGGGTATACCTGGGTGTGGGGATGCCAGTGGCCTCGCAGAGCAGCATGACATCGTCTAATGAAAAGGCCGTTAAGGACTCAGGCATCTTTGTCAGAGTAGGAGGCTGTAACACTGGACATAAAGTAGACATTATTATTAATAATTCACTATTGCCACATTAACCATCACTGTACACAGTGTTACTACTCCTAACCACATTAACCATCACTGTACACAGTGTTACTACTCCTAACCACATTAACCATCACTGTACATGGTGTTACTACTCCTAACCACATTAACCATCACTACATGTTGTTACTACTCCTAACCACATTAACCATCACTGTACACAGTGTTACTACTCCTAACCACATTAACCATCACTGTACACAGTGTTACTACTCCTAACCACATTAACCATCACTGTACACAGTGTTACTACTCCTAACCACATTAACCATCACTGTACACAGTGTTACTACTCC

Function

NR:

description
PREDICTED: neural cell adhesion molecule L1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU960638 True 821 lncRNA 0.46 2 78960553 78961975
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110516429 LOC100380643 coding upstream 228070 78553341 ~ 78732483 (+)
ccnq NA coding upstream 449401 78499887 ~ 78511152 (+)
ap4b1 ap4b1 coding upstream 471640 78447533 ~ 78488913 (+)
LOC118966133 NA coding upstream 509805 78449307 ~ 78450748 (+)
LOC110532863 LOC105030752 coding upstream 573553 78360205 ~ 78387000 (+)
LOC118966137 LOC106573004 coding downstream 145340 79107187 ~ 79174570 (+)
LOC118966138 LOC106573004 coding downstream 264560 79226535 ~ 79234703 (+)
LOC110532880 LOC106573007 coding downstream 348318 79310293 ~ 79324120 (+)
G843685 NA non-coding upstream 6336 78953836 ~ 78954217 (+)
G843661 NA non-coding upstream 19502 78940213 ~ 78941051 (+)
G843601 LOC106572978 non-coding upstream 57885 78899130 ~ 78902668 (+)
G843646 NA non-coding upstream 64821 78895505 ~ 78895732 (+)
G843644 NA non-coding upstream 79051 78880472 ~ 78881502 (+)
G843733 NA non-coding downstream 74085 79036060 ~ 79036463 (+)
G843668 NA non-coding downstream 74983 79036958 ~ 79044254 (+)
G843738 NA non-coding downstream 90473 79052448 ~ 79053976 (+)
G843680 NA non-coding downstream 159556 79121531 ~ 79128246 (+)
G843633 NA other upstream 108501 78848290 ~ 78852052 (+)
G843440 NA other upstream 298261 78661982 ~ 78662292 (+)
G843055 NA other upstream 876789 78076037 ~ 78083764 (+)
LOC110515359 LOC104931868 other upstream 1053213 77897489 ~ 77918888 (+)
G843741 NA other downstream 94659 79056634 ~ 79057069 (+)
G843678 NA other downstream 176077 79138052 ~ 79158409 (+)
G844164 NA other downstream 470529 79432504 ~ 79433205 (+)

Expression

G843691 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
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G843691 Expression in each Bioproject

Bar chart with 7 bars.
G843691 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 50.
End of interactive chart.

Co-expression Network