XLOC_002741 (ponzr2)



Basic Information


Item Value
gene id XLOC_002741
gene name ponzr2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 22123831 ~ 22127942 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00005089
GTTCCTGTATAAAGGCAAGATACTAATCGCAGATTTAGAAACAGTAGATACTTTCCATGACGTTGGATCTGCCATCAAAAAGCTGTAAGCATGTCGAATGTAATGGTAATAACACAGCCCCAGCCTACAATGATCTCTGCCCATTCTGATCATTGGGGTTCAGATATTTGTGACTGCTGCGATGACGTGCCTGAATGTTGCTTTGCTTTCTGGTGTTTCTCGTGTTACACATGCATTCAAGCCAGAAACTATGGTGAGTGTTTATGTCTCCCTCTGCTGGATATCTTCTGTGGCGGAATGATTCCACCCATCACCATGTCGATTAGGACCTCGATGCGACAGCGGTATGGCATACAGGGCACCATGTGTAATGACTGTGTGTTGTCCACATTCTGCAGACCCTGTGTTTGGTGTCAAATGTCCAGAGAAATGAAAGAACGGGATTTACAAATTGCTCTTATTCGCACTAGAAATTTATGAAGTCTTATTACACTACTGCAAAGATGCCTGCGGGCGGTGGTCCTTAAAATGAAGAAAATCATAAACAATATGTCAGAATCAGGGGTTATAAATACTTACTATCGACTggtcattttattatgcatttatatcATACGATGCCATTGTTTTTACATCTCTTTTGATGTATTTTGTGATTAAACACAATGCTATTTAAATTAGCTATTTCTAATGGAAAGAAAAAGATGGATATATTGTCACATATTGTAATGTTTACCAAGATATCCATCTTATCATTATAGTTTCTAATCAGCATcactaataaaataacattattacacTGTAAGAAATTCTATCATCAATTAGTCCtatatgttttaggtcattgtaacttactaaactaagttaatcttgttctaacttaattttataagttatgcaagctgattgtcagtttaacataatataagtacaatggactcataaggttagtTTGAttcagcttcttttttttttttttttgcattgaatgtATCTTTATGGAAATGTTGTTGGAATGTTGTATATAATTTATGGCACAATAAATGTTTATATGAAAAGA

Function


GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050411-41 No description available

Ensembl:

ensembl_id ENSDARG00000088539

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00005089 True 1060 mRNA 0.35 4 22123831 22127942
Loading

Neighbor


gene id symbol gene type direction distance location
XLOC_002740 si:ch73-111e15.1 coding downstream 6710 22110842 ~ 22117121 (-)
XLOC_002739 BX005027.3 coding downstream 17500 22097328 ~ 22106331 (-)
XLOC_002738 ponzr10 coding downstream 28326 22088465 ~ 22095505 (-)
XLOC_002737 ugt5g2 coding downstream 37205 22082596 ~ 22086626 (-)
XLOC_002736 tlx3b coding downstream 66830 22051054 ~ 22057001 (-)
XLOC_002742 cldn7b coding upstream 16826 22144768 ~ 22150419 (-)
XLOC_002743 fgf11b coding upstream 33643 22161585 ~ 22249444 (-)
XLOC_002744 BX005194.1 coding upstream 143847 22271789 ~ 22271903 (-)
XLOC_002745 NA coding upstream 353216 22481158 ~ 22491458 (-)
XLOC_002746 CT573337.1 coding upstream 366884 22494826 ~ 22497980 (-)
XLOC_002732 NA non-coding downstream 279968 21646154 ~ 21843863 (-)
XLOC_002731 NA non-coding downstream 474103 21627807 ~ 21649728 (-)
XLOC_002730 BX957322.2 non-coding downstream 550374 21570196 ~ 21573457 (-)
XLOC_002725 BX004800.2 non-coding downstream 1215275 20908442 ~ 20908556 (-)
XLOC_002724 NA non-coding downstream 1235071 20842918 ~ 20888760 (-)
XLOC_002748 NA non-coding upstream 402843 22530785 ~ 22534924 (-)
XLOC_002749 NA non-coding upstream 426407 22554349 ~ 22567208 (-)
XLOC_002750 NA non-coding upstream 476331 22604273 ~ 22607715 (-)

Expression


Expression of XLOC_002741(ponzr2) in the Zebrafish Sample from each Developmental Stage of PRJEB12982

Boxplot with 18 boxes. Box plot charts are typically used to display groups of statistical data. Each data point in the chart can have up to 5 values: minimum, lower quartile, median, upper quartile, and maximum.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 15.
End of interactive chart.

Expression of XLOC_002741(ponzr2) in the Zebrafish Sample of PRJEB12982

Bar chart with 360 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 15.
End of interactive chart.

Co-expression Network