G843680


Basic Information

Item Value
gene id G843680
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 79121531 ~ 79128246 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU960624
acagagatggaaagacagagatggaaagacagagagacagagatggaaagacagagataaaacgacagagataaaacgacagagatggaaagacagatggaaagacagagagaaaaaggcagagatggtaagacagagataaaaagacagagatggaaagacagatggaaagacagatggaaagacagagataaaaagacagagatggaatgacagagatggaaagacagtgataaaaagacagagatggaaagacagagatggaaagacagagatggaaagacagagatgaaaagacagagatggaaagacagatggaaagacagatggaaagacagagataaaaagacagagatggaaagacagagatggaaagacagatggaaagacagagatggaaagacatggaaagacagagataaaaagatagagatggaaagacagagatggaaagacagagataaaaagacagagatggagagatagagataaaaagacagagatggaaagacagagatggaaagacagagataaaaagacagagatggaaagacagagataaaagacagagatggaaagacagagataaaaaggcagagatggaaagacagagatggagagacagagatggagagacagagatggaaagatggagataaaaagacagagatggaaagacagagatggaaagacagagagacagagatggaaagacagagataaaaagacagagatggaaagacagagataaaaagacagagataaaaagacagagatggaaagacagagaatgaaagacagagatggaaagacagagataaaaagacaaatataaaaagacagagataaaaagacagagatggaaagatagagatggatagacagagatggagagaccgaGATAaaatgacagagatggaaagacagatggaaagacagagataaaaaacagagataaaaagacagagataaaaagacagagatttaaagacagagatggaaagacagagatgaaaagacagagatggaaagacagatggaaagacagatggaaagacagagataaaaagacagagatggaaagacagagatggaaagacagatggaaagacaaatgg

Function

NR:

description
serine/threonine-protein kinase fray2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU960624 True 1118 lncRNA 0.38 4 79121531 79128246
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110516429 LOC100380643 coding upstream 389048 78553341 ~ 78732483 (+)
ccnq NA coding upstream 610379 78499887 ~ 78511152 (+)
ap4b1 ap4b1 coding upstream 632618 78447533 ~ 78488913 (+)
LOC118966133 NA coding upstream 670783 78449307 ~ 78450748 (+)
LOC110532863 LOC105030752 coding upstream 734531 78360205 ~ 78387000 (+)
LOC118966138 LOC106573004 coding downstream 98289 79226535 ~ 79234703 (+)
LOC110532880 LOC106573007 coding downstream 182047 79310293 ~ 79324120 (+)
LOC118966137 LOC106573004 non-coding upstream 10960 79107187 ~ 79174570 (+)
G843738 NA non-coding upstream 67555 79052448 ~ 79053976 (+)
G843668 NA non-coding upstream 77277 79036958 ~ 79044254 (+)
G843733 NA non-coding upstream 85068 79036060 ~ 79036463 (+)
G843691 NA non-coding upstream 159556 78960553 ~ 78961975 (+)
G843669 NA non-coding downstream 27350 79155596 ~ 79162679 (+)
G843807 NA non-coding downstream 138422 79266668 ~ 79266910 (+)
G843809 NA non-coding downstream 139775 79268021 ~ 79268323 (+)
G843810 LOC106593432 non-coding downstream 142524 79270770 ~ 79275193 (+)
G843741 NA other upstream 64462 79056634 ~ 79057069 (+)
G843633 NA other upstream 269479 78848290 ~ 78852052 (+)
G843440 NA other upstream 459239 78661982 ~ 78662292 (+)
G843055 NA other upstream 1037767 78076037 ~ 78083764 (+)
G843678 NA other downstream 9806 79138052 ~ 79158409 (+)
G844164 NA other downstream 304258 79432504 ~ 79433205 (+)

Expression

G843680 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
End of interactive chart.

G843680 Expression in each Bioproject

Bar chart with 12 bars.
G843680 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 500.
End of interactive chart.

Co-expression Network