G843678


Basic Information

Item Value
gene id G843678
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 79138052 ~ 79158409 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU960622
cagagatggaaagacagagatggaaagacagatggaaagacagatggaaagacagagatggaaagaaagatggaaagacagatggaaagacagagatgaaaagacagatggaaagacagagataaaaagaaagagatggaaagacagagatggaaagacagagataaaaagacagatttggaaagacagagataaaaagacagagacggaaagagagagatggaaagacagagaatgaaagacagagatggaaagacagagataaaaagacaaatataaaaagacagagataaaaagacagatataaaaagacagatggagagaaagataaaagacagagatggaaagatagagaatgaaagacagagatggaaagacagagataaaaagacaaatataaaaagacagagataaaaagatagagaatgaaagacagagatggaaagacagagataaaaagacaaatataaaaatacagagataaaaagacagagatggaaagacagagaatgaaagacagagatggagagaccgaGATAaaatgacagagatggaaagacagatggaaagaaagagataAAAAACAGAGATAAAaaaacagagataaaaagacagagataaaaagacagagattaaaagacagagatggaaggacagagaaaaaaagacagagatggaaagacagagatggaaagacagagatggaaagacagagatggaaagacagagatagaaagacagagatggatagacagagagacagagacagagataaaaagacagagatggaaagacagagataaaaagacagagatggaaagacagagatggaaagacagagatggaaagacagagatggaaagacagagatgaaaagacagagaaggaaagacagatggaaagacagatggaaagacagagataaaaagacagagatggaaagacagagatggaaagacagagatggaaggacagagaaaaaaagacagagatggaaagacagagatggaaagacagagatggaaagacagagatggaaagacagagatagaaagacagagatggatagacagagagacagagacagagataaaaagacagagatggaaagacagagataaaaagacagagatggaaagacagagatggaaagacagagatggaaagacagagatggaaagacagagatgaaaagacagagaaggaaagacagatggaaagacagatggaaagacagagataaaaagacagagatggaaagacagagatggaaagacagagatggaaggacagagaaaaaaagacagagatggaaagacagagatggaaagacagagatggaaagacagagatggaaagacggagataaaaagacagagatggaaagacagagatggaaagacagagagacagagatggaaagacagagataaaaagacagagatggaaagacagagataaaaagacagagataaaaagacagagatggaaagacagagaatgaaagacagagatggaaagacagagataaaaagacaaatataaaaagacagagataaaaagacagagacggaaagatagagatggatagacagagatggagagaccgaGATAaaatgacagagatggaaagacagatggaaagacagagataaaaaacagagataaaaagacagagataaaaagacagagattaaaagacagagatggaaggacagagaaaaaaagacagagatcgaaagacagagataaaaatacagagatggaaagacagagatggagagacagagatggaaagacagagatgaaaagacagagatggaaagacagatggaaagacatatggaaagacagagataaaaagacagagatggaaagacagagatggaaagacagatggaaagacagatggaaagacagatggaaagacagagatggaaaaacagatggaaagacagagataaaaagacagagatggaaagacagagatggaaagacagagataaaaagacagagatggagagatagagatggaaagacagagatggagagacagagatggaaagacagagatggaaagacagagataaaaagacagagatggaaagacagagataaaaaggcagagatggaaagacagagataaaaagacagagatggaaagacagatggaaagacagagataaaaagacagagatggaatgacagagatggaaagacagagataaaaagacagagatggaaagacagagatggaaagacatagatgaaaagacagagatggaaagacagatggaaaggcagatggaaagacagagattaaaagacagagatggaaagacagagatggaaagacagatggaaagacagatggaaagacagagatggaaaaacagatggaaagacagagataaaaatacagagatggaaagacagatggaaagacagatggaaagacagagataaaaaggcagagatggaaagacagagataaaaagacagagatggaaagacagatggaaagacagagataaaaagacagagatggaatgacagagataaaaagacagagatggaaagacagagatggaaagacagagataaaaagacagagatggaaagacagagataaaaagacagagatggaaagacagatggaaagacagatggaaagacagagataaaaaggcagagatggaaagacagagataaaaagacagagatggaaagacagatggaaagacagagataaaaagacagagatggaatgacagagatggaaagacagagataaaaagacagagatggaaagacagagatggaaagtcagagataaaaagacagagatggagagatagagatggaaagacagagatggagagacagagatggaaagacagagatggaaagacagagataaaaagacagagatggaaagacagagatggaaagacagagataaaaaggcagag

Function

NR:

description
serine/threonine-protein kinase fray2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU960622 True 2972 TUCP 0.38 2 79138052 79158409
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110516429 LOC100380643 coding upstream 405569 78553341 ~ 78732483 (+)
ccnq NA coding upstream 626900 78499887 ~ 78511152 (+)
ap4b1 ap4b1 coding upstream 649139 78447533 ~ 78488913 (+)
LOC118966133 NA coding upstream 687304 78449307 ~ 78450748 (+)
LOC110532863 LOC105030752 coding upstream 751052 78360205 ~ 78387000 (+)
LOC118966138 LOC106573004 coding downstream 68126 79226535 ~ 79234703 (+)
LOC110532880 LOC106573007 coding downstream 151884 79310293 ~ 79324120 (+)
G843680 NA non-coding upstream 9806 79121531 ~ 79128246 (+)
G843676 NA non-coding upstream 10328 79125614 ~ 79127724 (+)
LOC118966137 LOC106573004 non-coding upstream 27481 79107187 ~ 79174570 (+)
G843738 NA non-coding upstream 84076 79052448 ~ 79053976 (+)
G843668 NA non-coding upstream 93798 79036958 ~ 79044254 (+)
G843807 NA non-coding downstream 108259 79266668 ~ 79266910 (+)
G843809 NA non-coding downstream 109612 79268021 ~ 79268323 (+)
G843810 LOC106593432 non-coding downstream 112361 79270770 ~ 79275193 (+)
G844042 NA non-coding downstream 174659 79333068 ~ 79333346 (+)
G843741 NA other upstream 80983 79056634 ~ 79057069 (+)
G843633 NA other upstream 286000 78848290 ~ 78852052 (+)
G843440 NA other upstream 475760 78661982 ~ 78662292 (+)
G843055 NA other upstream 1054288 78076037 ~ 78083764 (+)
G844164 NA other downstream 274095 79432504 ~ 79433205 (+)

Expression

G843678 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
End of interactive chart.

G843678 Expression in each Bioproject

Bar chart with 17 bars.
G843678 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
End of interactive chart.

Co-expression Network