G843669


Basic Information

Item Value
gene id G843669
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 79155596 ~ 79162679 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU960613
gtagaaacagagataaaaagacagagatggaaagacagagataaaaagacagagatggaaagacagagataaaaagacagagatggaaagacagatggaaagacagatggaaagacagagataaaaaggcagagatggaaagacagagataaaaagacagagatggaaagacagataaaaagacagagataaaaagacggagatggaaagacagagataaaaagacagagatggaaagacagaggtaAAAAGACAgatataaaaagacagagatggaaagacagagatggaaagacagagatcgaaagacagagatggagagacagagatggaaagacagagatggagagacagagaaggaaagacagagatcgaaagacagagataaaaagacagagatggagggacatAGATGGAacgacagagatggagagacagagatggaaagacagagttggaaagacagagataaaaagacagagatggaaagacagagataaaaagacagagataaaaagacagagatggaaagacagagataaaaagacagagatggaaagacagagatggaaagacagagatggaaagacagagatggaaagatggagataaaaagacagatggaaagacagagatggaaagacagagagacagagatggaaagacggAGATACAaaaacagagatggaaagacagagatggaaagacagagatggaaagagagagataataatacagagataaagagacagagatggaaagacagagaatgaaagacagagatggaaagaaagagatggaaagacagagataaaaagacagcgatggaaagacagataaaaagacagagataaaaagacggagatggaaagacagagatacaaagacagagatggaaagacagagatggaaagacagagatggaaagagagagataataatacagagataaagagacagagatggaaagacagagaatgaaagacagagatggaaagacagagatggaaagacagagataaaaagacagcgatggaaagacagataaaaagacagagataaaaagacggagatggaaagacagagataaaaagacagagatggaaagacagaggtaaaaagacagagatgaaaagacagagatggaaagacagttggaaagacagagataaaaagacagagatggaaagacagagatggaaagacagatggaaagacagatggaaagacagagatggaaagacagatggaaagacagatggaaagacagagatggaaagacagatggaaagacagagataaaaagacagagatggaaagacagagatggaaagacagagatggaaagacagagatggaaagacagatggaaagacatagatggaaagacagatggaaagacagaaatggaaagacagatggaaagacagagataaaaagacagagatggagagacagagattgaaagacagagatggagagacagagatggaaagacagagaaggaaagacagatggaaagacagagataaaaagacagagatggaaagacagagatgtagaaacagagataaaaagacagagatggaaagacagagataaaaagacagagatggaaagacagagataaaaagacagagatggaaagacagatggatagacagatggaaagacagagataaaaaggcagagatggaaagacagagataaaaagacagagatggaaagacagagatggaaagacagagatggaaagacagatggaaagacagatggaaagacagatggaaagacagagatggaaaaacagatggaaagacagagataaaaagacagagatggaaagacagagatggaaagacagagataaaaagacagagatggagagatagagatggaaagacagagatggagagacagagatggaaagacagagatggaaagacagagataaaaagacagagatggaaagacagagatggaaagacagagataaaaaggcagagatggaaagacagagataaaaagacagagatggaaagacagatggaaagacagagataaaaagacagagatggaatgacagagatggaaagacagagataaaaagacagagatggaaagacagagatggaaagacatagatgaaaagacagagatggaaagacagatggaaaggcagatggaaagacagagattaaaagacagagatggaaagacagagatggaaagacagatggaaagacagatggaaagacagagatggaaaaacagatggaaagacagagataaaaatacagagatggaaagacagatggaaagacagatggaaagacagagataaaaaggcagagatggaaagacagagataaaaagacagagatggaaagacagatggaaagacagagataaaaagacagagatggaatgacagagataaaaagacagagatggaaagacagagatggaaagacagagataaaaagacagagatggaaagacagagataaaaagacagagatggaaagacagatggaaagacagatggaaagacagagataaaaaggcagagatggaaagacagagataaaaagacagagatggaaagacagatggaaagacagagataaaaagacagagatggaatgacagagatggaaagacagagataaaaagacagagatggaaagacagagatggaaagtcagagataaaaagacagagatggagagatagagatggaaagacagagatggagagacagagatggaaagacagagatggaaagacagagataaaaagacagagatggaaagacagagatggaaagacagagataaaaaggcagagatggaaagacagagataaaaagacagagatggaaagacaaatggaaagacagagataaaaagacagagatggaatgacagagatggaaagacagagataaaaagacagagatggaaagacagagatggaaagacatagatgaaaagacagagatggaaagacagatggaaagacagatggaaagacagagattaaaagacagagatggaaagacagagatggaaagacagatggaaggacagatggaaagacagagatggaaaaacagatggaaagacagagataaaaatacagagatggaaagacagagatggaatgacagagatggaaagacagagataaaaagacagagatgaaaagacagagatggaaagacagatggaaagacagatggaaagacagagataaaaagacagagatggaaagtcagagatggaaagacagatggaaagacagatggaaagacagatggaaagacagagatggaaaaacagatggaaagacagagatggaaagacagatggaaagacagagataaaaagacagagatggagagacagagatggaaagacagagaaggaaagacagatggaaagacagagataaaaagacagagatggaaagacagagatgtagaaacagagataaaaagacagagatggaaagacagagataaaaagacagagatggaaagacagagataaaaagacagagatggaaagacagatggaaagacagatggaaagacagagataaaaaggcagagatggaaagacagagataaaaagacagagatggaaagacagagatggaa

Function

NR:

description
serine/threonine-protein kinase fray2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU960613 True 3664 lncRNA 0.39 2 79155596 79162679
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110516429 LOC100380643 coding upstream 423113 78553341 ~ 78732483 (+)
ccnq NA coding upstream 644444 78499887 ~ 78511152 (+)
ap4b1 ap4b1 coding upstream 666683 78447533 ~ 78488913 (+)
LOC118966133 NA coding upstream 704848 78449307 ~ 78450748 (+)
LOC110532863 LOC105030752 coding upstream 768596 78360205 ~ 78387000 (+)
LOC118966138 LOC106573004 coding downstream 63856 79226535 ~ 79234703 (+)
LOC110532880 LOC106573007 coding downstream 147614 79310293 ~ 79324120 (+)
G843680 NA non-coding upstream 27350 79121531 ~ 79128246 (+)
G843676 NA non-coding upstream 27872 79125614 ~ 79127724 (+)
LOC118966137 LOC106573004 non-coding upstream 45025 79107187 ~ 79174570 (+)
G843738 NA non-coding upstream 101620 79052448 ~ 79053976 (+)
G843668 NA non-coding upstream 111342 79036958 ~ 79044254 (+)
G843807 NA non-coding downstream 103989 79266668 ~ 79266910 (+)
G843809 NA non-coding downstream 105342 79268021 ~ 79268323 (+)
G843810 LOC106593432 non-coding downstream 108091 79270770 ~ 79275193 (+)
G844042 NA non-coding downstream 170389 79333068 ~ 79333346 (+)
G843741 NA other upstream 98527 79056634 ~ 79057069 (+)
G843633 NA other upstream 303544 78848290 ~ 78852052 (+)
G843440 NA other upstream 493304 78661982 ~ 78662292 (+)
G843055 NA other upstream 1071832 78076037 ~ 78083764 (+)
G844164 NA other downstream 269825 79432504 ~ 79433205 (+)

Expression

G843669 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
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G843669 Expression in each Bioproject

Bar chart with 17 bars.
G843669 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 750.
End of interactive chart.

Co-expression Network