LOC118966679 (LOC106594186)



Basic Information


Item Value
gene id LOC118966679
gene name LOC106594186
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 916288 ~ 922345 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036989450.1
GAAGAGGTGGTGTGGATCGGCCTGTATAGAGAGTGGAGGTGGTCTGACCAGAGTGGCTCAACCTTCAGAAACTGGATGGCACGCGAGCCAAACGGGGCAAATGAGGGAGGAAAGGACTGTGTGGAAGTTAAGTTCCCATCTGGAGAGTGGAATGATCACCTCTGTGTCACCAAACGTCCTTTTATCTGCTATGATGATAAGCTGGTTCTGGTCTCAGAGAACAAGACGTGGTCAGAAGCCCTGAGGTACTGCAGAGACCGGGGCATGGAGCTGGTGTCTGTCCACAACCACAGCATCCAGGACTGGGTCCGACAGAGAGCCAAGATGGCCTCCAGTCCCTTCGTCTGGCTGGGCCTGAGGTACACCTGCACTCTGGACTTCTGGTTCTGGGTCAATGGAGAAGAGTCCTGCTACCACAACTGGGCCCACGGGGAGGGCTACAACACCAGCAAGGAGCAGTCTGGGAACACGGGGGCcatagagagagacggggggaagTGGGTCGGCCTGCCTGAGACTGACAAATTCAACTTCATCTGCAGCAAGAGTGATGATTACTAAAACCAGACCCTGATCTCTGGACCAGCTGAACCCTACAGCCCAGCACATTGTTCCTGATATCAGGACCAGCTGAATCCTACAGCCCAACACATTGTTCCAGACCCTGATATCTGGACCAGCTGAACCCTACAGCCCAACACATTGTTCCTGATCTCTGGACCAGCTGAACCCAACAGCCCAACACATTGTTCCTGATATCAGGACCAGCTGAATCCTACAGCCCAACACATTGTTCCAGACCCTGATATCTGGACCAGCTGAATCCTACAGCCCAACACATTGTTCCAGACCCTGATATCTGGACCAGCTGAATCCTACAGCCCAACACATTGTTCCTGATCTCTGGACCAGCTGAACCCAACAGCACAACACATTGTTCCAGACCCTGATATCTGGCCCAGCTGAATCCTACAGCCCAACACATTGTTCCTGATCTCTGGACCAGCTGAACCCAACAGCCCAACACATTGTTCCAGACCCTGATATCGGGACCAGCTGAATCCTACAGCCCAACACATTGTTCCAGACCCTGATATCTGGACCAGCTGAACCCTACAGCCCAACACATTGTTCCAGACATATTCAGATTTACATTGCATAAGGTGATGGATAATCAATCTTTTTATATAATTAATCATTTaaattattttaatatttttttatatttgtatATTCTCTTATTGAATTGGATTCATATCatactatttttattttcttatgGACGTATTACTGTTCATCTTATTACCCATATCATTACCGGTTATTTTATTACCCATATTATTACTGGTTATCGTATTACCCATATCATTACTGGGTATCTTATTGCCCATATCACATTACTGGTTATCTTATTGCCCATATCATTACTGTTCATCTTATTACCCATATCATTACTGGTCATCTTATTACCCATATCTAATTACCCATATCATTACTGGTCATCTTATTACCCATATCTAATTACCCATATCATTACTGGTCATCTTATTACCCATTTCATTACTGGTATCTTATTACCCATATTATTACTGGTTATCGTATTACCCATATCATTACTGGTTATCTTATTGCCCATCATTACTGGTTATCTTATTACCCATATCATTACTGGTTATCTTATTACCCATATTATTACTGGTTATCGTATTACCCATATCATTACTGGGTATCTTATTGCCCATATCACATTACTGGTTATCTTATTGCCCATATCATTACTGTTTATCCCATTACCCATATCATTACTGGTTATCTTATTACCCATATCATTACTGTTTATTGTATAACCCATATCATTACTGGTTATCTTATTACCCATGGTTATCTTATTATCCATATCTAATTACCCATATCTTATTATCCATGTCATTACTGGTTATCTTATTACCCCACATCATTACTGGTCATCTTATTACCCATATCATTACTGTTCATCTTATTACCCATATCATTACTGGTTATCTTATTACCCATGGTTATCTTATTACCCATATCTAATTACCCATATCTTATTATCCATGCCATTACTGGTTATCTTATTACCCCACATCATTACTGGTCATCTTATTACCCATATCATTACTGTTCATCTTATTACCCATATCATTACTGGTTATCTTATTACCCATGGTTATCTTATTACCCATATCTAATTACCCATATCTTATTATCCATGCCATTACTGTTCATCCTATTACCCATATCATTACTGTTGATCTTATTACCCATATCATTACTGGTTATCTTATTACCCATATCTTATTACCCATATCATTACTGGTTATCTTATTACCCATATCTTATTACCCATATCTTATTACCCATATCGTATTACCCATATTATTACTGGTTATCTTATTAACCATGTCATTACATGTTATCTTATTACTAATATCTTATTACCCCATATCATTACTGGTCATCTTATTACCCATATTATTAATAGTTATATTATTAACCATATCTTATTACCCATATCATTACTGGTTATTTTAATACCTATTTCAGTACTGGTTATCTTAATTTACATATCATTACTGGTCATCTTATTACTGGTCATCTTATTACTGGTCATCTTATCATCTTATTGACATGACAGGGGCAACTGGAACTCAAAAAACATATTCTCTAGTTGAAATGTATGTTGATTTGAAATTAGTAATAAATTACATTAGCTGCAACATGGACTAAAATCATGGACTAAATAATTATCCTAGCTGCATGGACTAAAATCATGGACTAAATAATTATCCTAGCTGCAACATGGACTAAAATCATGGACTAAATAATTATCCTAGCTGCAACATGGACTAAAATCATGGACTAAATAATTATCCTAGCTGCAACATGGACTAAAATCATGGACTAAATAATTATCCTAGCTGCAAAATGGACTAAAATCATGGACTAAATAATTATCCTAGCAACATGGACTAAAATCATGGACTAAATAATTATCCTAGCAACATGGACTAAAATCATGGACTAAATAATTATCCTAGCTGCAGCATGGACTAAAATCATGGACTAAATAATTATCCTAGCTGCATGGACTAAAATCATGGACTAAATAATTATCCTAGCTGCAACATGGACTAAAATCATGGACTAAATAATTATCCTAGCTGCAACATGGACTAAAATCATGGACTAAATAAAGGTGGTAGAACTTTGGTATTAAAGTCAGTATCTTCTAAAACCACTGGTCCAACATTCAGGAAATTAAGGGTACATAGAGACTTAAGGGAACATAaaggagaggactggccacccctcatagcctggttcctctctagatttcttcctaggttctggcctttctagggagtttttcctagccaacgtgcttctacacctgcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgtgacatcagctgatgtaagaagggctatataaatacatttgatttgataaagcaTTTAGGGAACATAAATTATTAAGGGAACATACATCATTAAGGGAACATACATCATTAAGGGAACATACATCATTAAGGGAACATACATCCTGAAGGGAATATACATCATTAAGGGAACATACATCCTTAAGGGAATATACATCATTAAGGGAACATACATCATTAAGGGAACATACATCATTAAGGGAACATACATCATTAAGGGAACATACATCATTAAGGGAACATACATCATTAAGGGAACATACATCATTAAGGGAACATACATCATTAAGGGAACATACATCATTAAGGGAACATACATCATTAAGGGAACATACATCATTAAGGGAACATACATCATTAAGGGAACATACATCATTAAGGGAACATACATCATTAAGGGAACATAAATCCTTAAGGAAACATACATTATTAAGGGAACATAAATCCTTAAGGAAACATAAATCCTTAAGGGAACATAAATCCTTAAGGGAACATACATTATTAAGGGAACATAAATCCTTAAGGAAACATAAATCCTTAAGGGAACATAAATCCTTAAGGGAACATACATTATTAAGGGAACATAAATCCTTAAGGGAACATACATTATTAAGGGAACATAAATCCTTAAGGGAACATAAATCCTTAAGGGAACATAAATCCTTAAGGGAACATACATTATTAAGGGAACATAAATCCTTAAGGGAACATACATTATTAAGGGAACATAAATCCTTAAGGAAACATAAATCCTTAAGGAAACATAAATCATCCTGCAGCACTCCCTGGTGGTGTGATGATAAAACTGCAAGAATCTGTGTTTCAATAAAAACTATCAAACTA

Function


NR:

description
PREDICTED: secretory phospholipase A2 receptor-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036989450.1 True 4349 mRNA 0.37 3 916288 922345

Neighbor


gene id symbol gene type direction distance location
LOC118966677 NA coding downstream 25020 886116 ~ 891268 (-)
LOC118966676 NA coding downstream 30919 879647 ~ 885369 (-)
LOC110534824 LOC106604036 coding downstream 92425 792950 ~ 823863 (-)
mis18a LOC106604044 coding downstream 190795 697530 ~ 725493 (-)
sodc sodc coding downstream 291374 617477 ~ 624914 (-)
LOC118966678 NA coding upstream 10 922355 ~ 925356 (-)
LOC118936903 NA coding upstream 223515 1145860 ~ 1212061 (-)
LOC110533260 LOC106604035 coding upstream 346285 1268630 ~ 1273544 (-)
LOC110518095 LOC106604029 coding upstream 355067 1277329 ~ 1347922 (-)
LOC110533263 NA coding upstream 664153 1586498 ~ 1590637 (-)
G844870 NA non-coding downstream 19126 896953 ~ 897162 (-)
G844865 NA non-coding downstream 22069 880246 ~ 894219 (-)
G844859 LOC106604021 non-coding downstream 46491 866424 ~ 869797 (-)
G844823 NA non-coding downstream 93234 822763 ~ 823054 (-)
G844820 NA non-coding downstream 103683 812339 ~ 812605 (-)
G844937 NA non-coding upstream 30720 953065 ~ 954581 (-)
G844968 NA non-coding upstream 96427 1018772 ~ 1019917 (-)
G844976 NA non-coding upstream 105795 1028140 ~ 1029996 (-)
G845011 NA non-coding upstream 112909 1035254 ~ 1107144 (-)
G845019 NA non-coding upstream 126808 1049153 ~ 1080774 (-)
G844866 LOC106591684 other downstream 25530 884160 ~ 890758 (-)
G844847 NA other downstream 69536 844673 ~ 846752 (-)
G844794 NA other downstream 133550 782024 ~ 782738 (-)
G844686 NA other downstream 342350 571525 ~ 573938 (-)
LOC110533226 LOC107554284 other downstream 818593 92131 ~ 97728 (-)
G844975 NA other upstream 103309 1025654 ~ 1027442 (-)
G845133 NA other upstream 312202 1234547 ~ 1235708 (-)
G845570 NA other upstream 727595 1649940 ~ 1651993 (-)

Expression



Co-expression Network