Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110534828 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 3092535 ~ 3093211 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: olfactory receptor 6F1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110534828 | True | 677 | mRNA | 0.46 | 1 | 3092535 | 3093211 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534827 | LOC106604014 | coding | downstream | 12549 | 3071880 ~ 3079986 (-) |
| LOC110533230 | LOC105028657 | coding | downstream | 696539 | 2308544 ~ 2395996 (-) |
| LOC110534809 | LOC106590903 | coding | downstream | 874563 | 2193384 ~ 2217972 (-) |
| LOC110534810 | s47a1 | coding | downstream | 920742 | 2127694 ~ 2171793 (-) |
| LOC110534823 | NA | coding | downstream | 1089061 | 1897873 ~ 2003474 (-) |
| LOC110533269 | LOC104929447 | coding | upstream | 58111 | 3151322 ~ 3153275 (-) |
| LOC110533270 | LOC106604012 | coding | upstream | 95751 | 3188962 ~ 3190885 (-) |
| smyd4 | smyd4 | coding | upstream | 187477 | 3280610 ~ 3307832 (-) |
| LOC110492805 | rtn4rl1 | coding | upstream | 325253 | 3418464 ~ 3577074 (-) |
| LOC110491256 | LOC106603993 | coding | upstream | 540186 | 3633397 ~ 3676854 (-) |
| G846506 | NA | non-coding | downstream | 8735 | 3083215 ~ 3083800 (-) |
| G846457 | NA | non-coding | downstream | 29374 | 3058347 ~ 3063161 (-) |
| G846472 | NA | non-coding | downstream | 67603 | 3024339 ~ 3024932 (-) |
| G846465 | NA | non-coding | downstream | 77178 | 3012230 ~ 3015357 (-) |
| G846461 | NA | non-coding | downstream | 82870 | 3007676 ~ 3009665 (-) |
| G846547 | NA | non-coding | upstream | 70103 | 3163314 ~ 3163551 (-) |
| G846567 | NA | non-coding | upstream | 169978 | 3263189 ~ 3263538 (-) |
| G846600 | NA | non-coding | upstream | 174538 | 3267749 ~ 3300488 (-) |
| G846614 | NA | non-coding | upstream | 218192 | 3311403 ~ 3311608 (-) |
| G846621 | NA | non-coding | upstream | 227752 | 3320963 ~ 3321194 (-) |
| G846290 | NA | other | downstream | 339432 | 2748953 ~ 2753103 (-) |
| G846125 | LOC106599738 | other | downstream | 448888 | 2643309 ~ 2643647 (-) |
| G845814 | NA | other | downstream | 935436 | 2156390 ~ 2157099 (-) |
| G845769 | NA | other | downstream | 994176 | 2093235 ~ 2098359 (-) |
| G847740 | NA | other | upstream | 1323395 | 4416606 ~ 4419950 (-) |
| G847774 | NA | other | upstream | 1474601 | 4567812 ~ 4569190 (-) |
