Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118937089 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 5868024 ~ 5868098 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005034483.1 | True | 75 | mRNA | 0.36 | 1 | 5868024 | 5868098 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937090 | NA | coding | downstream | 234 | 5867715 ~ 5867790 (-) |
| LOC118937091 | NA | coding | downstream | 705 | 5867245 ~ 5867319 (-) |
| LOC118937088 | NA | coding | downstream | 987 | 5866959 ~ 5867037 (-) |
| LOC118936906 | LOC106603984 | coding | downstream | 43670 | 5821765 ~ 5824354 (-) |
| LOC110533271 | LOC106591845 | coding | downstream | 71749 | 5786430 ~ 5796275 (-) |
| pitx1 | pitx1 | coding | upstream | 92139 | 5960237 ~ 5971002 (-) |
| LOC110533286 | LOC106603967 | coding | upstream | 284586 | 6152684 ~ 6176005 (-) |
| larp1 | LOC106603968 | coding | upstream | 330424 | 6198522 ~ 6256673 (-) |
| sap30l | LOC106603970 | coding | upstream | 484699 | 6352797 ~ 6361051 (-) |
| LOC110533288 | ggnbp2 | coding | upstream | 493794 | 6361892 ~ 6376512 (-) |
| G848624 | NA | non-coding | downstream | 3241 | 5864444 ~ 5864783 (-) |
| G848617 | NA | non-coding | downstream | 20690 | 5846403 ~ 5847334 (-) |
| G848563 | NA | non-coding | downstream | 49206 | 5738694 ~ 5818818 (-) |
| G848522 | NA | non-coding | downstream | 66858 | 5764380 ~ 5801166 (-) |
| G848555 | NA | non-coding | downstream | 163957 | 5703859 ~ 5704067 (-) |
| G848634 | pcbd2 | non-coding | upstream | 50142 | 5918240 ~ 5931386 (-) |
| G848643 | catsper3 | non-coding | upstream | 68668 | 5936766 ~ 5937242 (-) |
| G848646 | NA | non-coding | upstream | 74577 | 5942675 ~ 5942890 (-) |
| G848647 | NA | non-coding | upstream | 74974 | 5943072 ~ 5943529 (-) |
| G848664 | NA | non-coding | upstream | 91106 | 5959204 ~ 5959529 (-) |
| G848524 | LOC106591845 | other | downstream | 45996 | 5739884 ~ 5822028 (-) |
| LOC118966693 | NA | other | downstream | 143214 | 5715285 ~ 5724923 (-) |
| G848149 | NA | other | downstream | 725553 | 5141877 ~ 5142471 (-) |
| G847861 | NA | other | downstream | 1055842 | 4810948 ~ 4812182 (-) |
| G847843 | NA | other | downstream | 1126436 | 4736529 ~ 4741588 (-) |
| G849438 | hpd | other | upstream | 913525 | 6778916 ~ 6787520 (-) |
| G849536 | NA | other | upstream | 1146633 | 7014731 ~ 7015222 (-) |
| LOC110533297 | LOC106603951 | other | upstream | 1212493 | 7080591 ~ 7308250 (-) |
| G849864 | LOC106603950 | other | upstream | 1572805 | 7400883 ~ 7443617 (-) |
| G850323 | NA | other | upstream | 1873204 | 7741302 ~ 7746624 (-) |
