Item | Value |
---|---|
gene id | LOC110533387 |
gene name | LOC106603911 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048574.1 |
NCBI id | CM023228.2 |
chromosome length | 87811138 |
location | 9386712 ~ 9406546 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PWWP domain-containing protein 2A-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036989641.1 | False | 5721 | mRNA | 0.52 | 2 | 9386712 | 9403228 |
XM_036989642.1 | True | 4582 | mRNA | 0.53 | 3 | 9386712 | 9406546 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110533395 | LOC106603912 | coding | upstream | 5229 | 9344673 ~ 9383321 (+) |
LOC110534852 | LOC106603915 | coding | upstream | 39633 | 9338750 ~ 9347079 (+) |
LOC118936907 | NA | coding | upstream | 69718 | 9316053 ~ 9316994 (+) |
hbegf | LOC106603916 | coding | upstream | 83583 | 9299866 ~ 9303129 (+) |
LOC110533394 | LOC106603917 | coding | upstream | 87850 | 9291157 ~ 9298862 (+) |
havcr1 | LOC106603908 | coding | downstream | 104094 | 9510640 ~ 9518509 (+) |
LOC110533404 | LOC106603907 | coding | downstream | 111881 | 9518427 ~ 9522324 (+) |
zmat2 | zmat2 | coding | downstream | 288931 | 9695477 ~ 9700112 (+) |
lcp2a | LOC106603899 | coding | downstream | 300236 | 9706782 ~ 9722545 (+) |
foxi3a | LOC106603898 | coding | downstream | 318085 | 9724631 ~ 9727404 (+) |
G851418 | NA | non-coding | upstream | 1988 | 9384309 ~ 9384724 (+) |
G851383 | NA | non-coding | upstream | 48142 | 9337072 ~ 9338570 (+) |
G851325 | NA | non-coding | upstream | 163399 | 9223081 ~ 9223313 (+) |
G851320 | NA | non-coding | upstream | 173924 | 9212485 ~ 9212788 (+) |
G851437 | NA | non-coding | downstream | 25035 | 9431581 ~ 9431832 (+) |
G851467 | NA | non-coding | downstream | 85027 | 9491573 ~ 9497849 (+) |
G851477 | NA | non-coding | downstream | 103536 | 9510082 ~ 9510338 (+) |
G851495 | NA | non-coding | downstream | 139497 | 9546043 ~ 9563970 (+) |
G851402 | NA | non-coding | downstream | 249812 | 9656358 ~ 9657619 (+) |
G850605 | LOC106600668 | other | upstream | 1088999 | 8297312 ~ 8297713 (+) |
G850516 | NA | other | upstream | 1273354 | 8112879 ~ 8113358 (+) |
G849901 | NA | other | upstream | 1900636 | 7481614 ~ 7486076 (+) |
G849821 | LOC100136697 | other | upstream | 1916129 | 7469461 ~ 7470583 (+) |
G849798 | LOC106603947 | other | upstream | 1993444 | 7383954 ~ 7393268 (+) |
G851636 | NA | other | downstream | 412895 | 9819441 ~ 9824154 (+) |
G851645 | NA | other | downstream | 429398 | 9835944 ~ 9836332 (+) |
G852341 | NA | other | downstream | 671282 | 10077828 ~ 10081012 (+) |
G852555 | NA | other | downstream | 890945 | 10297491 ~ 10297903 (+) |
G852605 | NA | other | downstream | 1005396 | 10411942 ~ 10414854 (+) |