LOC118936915


Basic Information

Item Value
gene id LOC118936915
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 11090021 ~ 11091274 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034347.1
aaGAGGACTGTTGACCTTTTTTTTTATCAGGACCAGAAGGAGGCAGGGCTTTGGTTAGAGATTTCCACCCAGGGCCCCAGAGTACTGTTGTGTTTCTTGACTTctgtttgcagagttcacaatCTGCCTGATTGATAGTTAGTCCCATTGATTGAAGTATAACACATATATTATCAATCtgtttaaatctctctctctgctccaagCCTCACAGCACAATGTGACTGCTGCCTGGATAACAACGAGAGAACCAAAGAAGAGACTCTGCAGTGTAAATaACGCGCGGCTCTGCTGGGGACAGATGGCATGATGCAGCATATCAGAGCAGTAATCTGCAACCCCATCAAACATTTACATCACCATCCCACCCCCTTTACTGGGCAAGCAGGACAGACACAGCCCTGTGCTGCCTGCCCTGGGACAACACGCCTTGCTGGTCTCCTGTTACCAGTTACCTTCACAGAAACATTAGGAACAGGACATCCCTTCATGTGTCACGCCCCGTACTGTCTGTCCTCTTGGAGACGCCATGGATCGACATGAAAGGGAAGGGAATGGAGAATACAGTGACGACATACCCAGGCcgaacccggacaacgctgggccaattgtgccccgccctatgggactcccaatcacggccggatgtgatacagcctggatacgaagcagggactgtagtgaagcctcctgcactgagatgcagtgtcttacaGTATATACAGCATCTGCTCTACTTTGGAGAAgtgtaatatatgccatttagcagacacttcttTACAAAGCAACTTATTCATGCATGAATATATTTTACGTATGCATTTTATGAATACATATTTGATGCCTCTGTTTATGTGTTCCTCTTTCCCTTTGAAGCCCCACAATACACAGGCATAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034347.1 True 897 mRNA 0.47 3 11090021 11091274
Loading

Neighbor

gene id symbol gene type direction distance location
bod1 LOC106603873 coding downstream 60510 11026087 ~ 11029511 (-)
LOC110533336 LOC106603872 coding downstream 96228 10988789 ~ 10993793 (-)
LOC110533330 LOC106603879 coding downstream 240188 10760682 ~ 10849833 (-)
LOC118966706 NA coding downstream 380945 10707542 ~ 10709076 (-)
LOC118936914 NA coding downstream 540720 10547571 ~ 10549301 (-)
LOC110533343 LOC106603867 coding upstream 376107 11467381 ~ 11474701 (-)
LOC110533344 LOC106603866 coding upstream 470662 11561936 ~ 11564213 (-)
LOC110533345 LOC106603865 coding upstream 476219 11567493 ~ 11583280 (-)
kctd16b LOC106603861 coding upstream 695921 11787195 ~ 11868573 (-)
LOC110534849 LOC106567493 coding upstream 1003060 12094334 ~ 12239835 (-)
G853289 NA non-coding downstream 32519 11057241 ~ 11057502 (-)
G853283 NA non-coding downstream 45568 11044220 ~ 11044453 (-)
G853276 NA non-coding downstream 48630 11041190 ~ 11041391 (-)
G853271 NA non-coding downstream 53399 11036332 ~ 11036622 (-)
G853265 NA non-coding downstream 57627 11032169 ~ 11032394 (-)
G853390 LOC107598339 non-coding upstream 43545 11134819 ~ 11139800 (-)
G853450 NA non-coding upstream 69990 11161264 ~ 11165423 (-)
G853443 NA non-coding upstream 113119 11204393 ~ 11205917 (-)
G853545 NA non-coding upstream 189904 11281178 ~ 11281421 (-)
G853550 NA non-coding upstream 201030 11292304 ~ 11292585 (-)
G853244 NA other downstream 84363 11005109 ~ 11005658 (-)
G852802 NA other downstream 627371 10462256 ~ 10462650 (-)
G850763 NA other downstream 2657980 8431531 ~ 8432041 (-)
G850323 NA other downstream 3343397 7741302 ~ 7746624 (-)
G849864 LOC106603950 other downstream 3646404 7400883 ~ 7443617 (-)
G853740 NA other upstream 350978 11442252 ~ 11442590 (-)
G854016 LOC106603864 other upstream 523982 11615256 ~ 11620922 (-)
G854402 NA other upstream 693846 11785120 ~ 11785853 (-)
G854734 golga7b other upstream 1202829 12294103 ~ 12294536 (-)

Expression

LOC118936915 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.4.
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LOC118936915 Expression in each Bioproject

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LOC118936915 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 8.
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Co-expression Network