Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110533341 |
| gene name | LOC106603869 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 11155082 ~ 11205916 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| neuron-specific protein family member 2-like |
| id | name | namespace |
|---|---|---|
| GO:0007212 | dopamine receptor signaling pathway | biological_process |
| GO:0048268 | clathrin coat assembly | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0032051 | clathrin light chain binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036989699.1 | True | 1965 | mRNA | 0.45 | 5 | 11155082 | 11205916 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533338 | LOC106603870 | coding | upstream | 15434 | 11098800 ~ 11139648 (+) |
| bnip1b | LOC106603874 | coding | upstream | 168655 | 10980237 ~ 10986427 (+) |
| crebrf | LOC106603875 | coding | upstream | 180486 | 10946117 ~ 10974596 (+) |
| LOC110533334 | LOC106603876 | coding | upstream | 209096 | 10941800 ~ 10945986 (+) |
| LOC110533329 | LOC106603877 | coding | upstream | 394484 | 10742123 ~ 10760598 (+) |
| LOC110533342 | LOC106603868 | coding | downstream | 88191 | 11294107 ~ 11299192 (+) |
| LOC118936916 | NA | coding | downstream | 173718 | 11376533 ~ 11380447 (+) |
| lars1b | NA | coding | downstream | 377423 | 11583339 ~ 11613642 (+) |
| plac8l1 | LOC106603864 | coding | downstream | 407873 | 11613789 ~ 11619212 (+) |
| LOC110533346 | LOC106603862 | coding | downstream | 417310 | 11623226 ~ 11663845 (+) |
| G853293 | NA | non-coding | upstream | 30140 | 11069839 ~ 11124942 (+) |
| G853291 | NA | non-coding | upstream | 88194 | 11066663 ~ 11066888 (+) |
| G853290 | NA | non-coding | upstream | 92230 | 11062475 ~ 11062852 (+) |
| G853285 | NA | non-coding | upstream | 109769 | 11045059 ~ 11045313 (+) |
| G853284 | NA | non-coding | upstream | 110180 | 11044657 ~ 11044902 (+) |
| G853506 | NA | non-coding | downstream | 47044 | 11252960 ~ 11253182 (+) |
| G853515 | NA | non-coding | downstream | 60480 | 11266396 ~ 11266743 (+) |
| G853556 | NA | non-coding | downstream | 94444 | 11300360 ~ 11300652 (+) |
| G853557 | NA | non-coding | downstream | 95982 | 11301898 ~ 11302805 (+) |
| G853574 | NA | non-coding | downstream | 107425 | 11313341 ~ 11313547 (+) |
| LOC110534845 | epn4 | other | upstream | 423266 | 10669776 ~ 10731816 (+) |
| G852605 | NA | other | upstream | 740228 | 10411942 ~ 10414854 (+) |
| G852555 | NA | other | upstream | 857179 | 10297491 ~ 10297903 (+) |
| G852341 | NA | other | upstream | 1074070 | 10077828 ~ 10081012 (+) |
| G851645 | NA | other | upstream | 1318750 | 9835944 ~ 9836332 (+) |
| G853516 | NA | other | downstream | 61458 | 11267374 ~ 11267636 (+) |
| G853577 | NA | other | downstream | 110034 | 11315950 ~ 11316340 (+) |
| zcchc10 | zcchc10 | other | downstream | 1279893 | 12485809 ~ 12497278 (+) |
| G855483 | LOC106603848 | other | downstream | 1779115 | 12985031 ~ 12989842 (+) |
| G855498 | NA | other | downstream | 1810618 | 13016534 ~ 13021032 (+) |
