Item | Value |
---|---|
gene id | LOC110533345 |
gene name | LOC106603865 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048574.1 |
NCBI id | CM023228.2 |
chromosome length | 87811138 |
location | 11567493 ~ 11583280 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: RNA-binding protein 27-like isoform X3 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021617456.2 | False | 5461 | mRNA | 0.47 | 21 | 11567493 | 11583280 |
XM_021617457.2 | False | 5458 | mRNA | 0.47 | 21 | 11567493 | 11583280 |
XM_036989700.1 | False | 5305 | mRNA | 0.47 | 20 | 11567493 | 11583280 |
TU973334 | True | 459 | TUCP | 0.42 | 3 | 11581686 | 11583188 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110533344 | LOC106603866 | coding | downstream | 3280 | 11561936 ~ 11564213 (-) |
LOC110533343 | LOC106603867 | coding | downstream | 92792 | 11467381 ~ 11474701 (-) |
LOC118936915 | NA | coding | downstream | 476219 | 11090021 ~ 11091274 (-) |
bod1 | LOC106603873 | coding | downstream | 537982 | 11026087 ~ 11029511 (-) |
LOC110533336 | LOC106603872 | coding | downstream | 573700 | 10988789 ~ 10993793 (-) |
kctd16b | LOC106603861 | coding | upstream | 203915 | 11787195 ~ 11868573 (-) |
LOC110534849 | LOC106567493 | coding | upstream | 511054 | 12094334 ~ 12239835 (-) |
trnaa-ugc-40 | NA | coding | upstream | 614945 | 12198225 ~ 12198294 (-) |
LOC118966708 | NA | coding | upstream | 684440 | 12267720 ~ 12270434 (-) |
nfip1 | nfip1 | coding | upstream | 822554 | 12405834 ~ 12431079 (-) |
G853972 | NA | non-coding | downstream | 6245 | 11541197 ~ 11561248 (-) |
G853968 | NA | non-coding | downstream | 35265 | 11531192 ~ 11532228 (-) |
G853967 | NA | non-coding | downstream | 36439 | 11528866 ~ 11531054 (-) |
G853828 | NA | non-coding | downstream | 46844 | 11520450 ~ 11520649 (-) |
G853824 | NA | non-coding | downstream | 48269 | 11518933 ~ 11519224 (-) |
G854017 | NA | non-coding | upstream | 34825 | 11618105 ~ 11619105 (-) |
G854102 | NA | non-coding | upstream | 148787 | 11732067 ~ 11732317 (-) |
G854116 | NA | non-coding | upstream | 156235 | 11739515 ~ 11739763 (-) |
G854125 | NA | non-coding | upstream | 160834 | 11744114 ~ 11749161 (-) |
G854154 | NA | non-coding | upstream | 187070 | 11770350 ~ 11770565 (-) |
G853740 | NA | other | downstream | 124903 | 11442252 ~ 11442590 (-) |
G853244 | NA | other | downstream | 561835 | 11005109 ~ 11005658 (-) |
G852802 | NA | other | downstream | 1104843 | 10462256 ~ 10462650 (-) |
G850763 | NA | other | downstream | 3135452 | 8431531 ~ 8432041 (-) |
G850323 | NA | other | downstream | 3820869 | 7741302 ~ 7746624 (-) |
G854016 | LOC106603864 | other | upstream | 31976 | 11615256 ~ 11620922 (-) |
G854402 | NA | other | upstream | 201840 | 11785120 ~ 11785853 (-) |
G854734 | golga7b | other | upstream | 710823 | 12294103 ~ 12294536 (-) |
G855079 | sept8 | other | upstream | 998113 | 12581393 ~ 12611178 (-) |
G856922 | NA | other | upstream | 2601007 | 14184287 ~ 14184974 (-) |