Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110533434 |
| gene name | LOC106603775 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 17520259 ~ 17545622 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021617631.2 | False | 2741 | mRNA | 0.42 | 6 | 17520579 | 17545620 |
| XM_021617630.2 | False | 2755 | mRNA | 0.42 | 6 | 17520579 | 17545622 |
| TU981076 | False | 1912 | lncRNA | 0.34 | 1 | 17520259 | 17522170 |
| TU981078 | True | 418 | TUCP | 0.52 | 4 | 17522261 | 17545476 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936917 | klhl35 | coding | downstream | 27048 | 17492108 ~ 17493531 (-) |
| LOC110533431 | LOC106603773 | coding | downstream | 82096 | 17429250 ~ 17438483 (-) |
| dcps | dcps | coding | downstream | 196557 | 17314602 ~ 17324022 (-) |
| LOC110533427 | st3gal4 | coding | downstream | 215943 | 17251703 ~ 17304636 (-) |
| kcnj1b | kcnj1 | coding | downstream | 281464 | 17237915 ~ 17239115 (-) |
| rad51d | rad51d | coding | upstream | 1065453 | 18611075 ~ 18622700 (-) |
| si:ch211-209a2.2 | LOC106603750 | coding | upstream | 1414281 | 18959903 ~ 18975879 (-) |
| rcc1l | rcc1l | coding | upstream | 1462610 | 19008232 ~ 19022135 (-) |
| ncf1 | spd2b | coding | upstream | 1478273 | 19023895 ~ 19040794 (-) |
| LOC110533448 | LOC106603743 | coding | upstream | 1520616 | 19066238 ~ 19162147 (-) |
| G861067 | NA | non-coding | downstream | 11816 | 17508520 ~ 17508763 (-) |
| G861060 | NA | non-coding | downstream | 21794 | 17495908 ~ 17498785 (-) |
| G861058 | NA | non-coding | downstream | 32782 | 17486358 ~ 17487797 (-) |
| G861039 | NA | non-coding | downstream | 61411 | 17458663 ~ 17459168 (-) |
| G860807 | NA | non-coding | downstream | 93224 | 17427103 ~ 17427355 (-) |
| G861171 | NA | non-coding | upstream | 148253 | 17693875 ~ 17756940 (-) |
| G861216 | NA | non-coding | upstream | 221254 | 17766876 ~ 17767403 (-) |
| G861310 | NA | non-coding | upstream | 324087 | 17869709 ~ 17870392 (-) |
| G861338 | NA | non-coding | upstream | 352583 | 17898205 ~ 17898527 (-) |
| G861802 | NA | non-coding | upstream | 477846 | 18023468 ~ 18023903 (-) |
| G859594 | NA | other | downstream | 1063732 | 16456548 ~ 16456847 (-) |
| LOC110533421 | LOC106603793 | other | downstream | 1377842 | 16141284 ~ 16185730 (-) |
| LOC110534856 | LOC106603798 | other | downstream | 1482756 | 16018538 ~ 16057861 (-) |
| G858015 | NA | other | downstream | 2402550 | 15117422 ~ 15118029 (-) |
| LOC110533380 | LOC106603823 | other | downstream | 2947675 | 14557109 ~ 14794250 (-) |
| G862071 | tmem132e | other | upstream | 855873 | 18401495 ~ 18405409 (-) |
| G862927 | NA | other | upstream | 1479720 | 19025342 ~ 19027578 (-) |
| G863863 | NA | other | upstream | 2313448 | 19859070 ~ 19860611 (-) |
| G865899 | cssa04h11orf63 | other | upstream | 4146141 | 21691763 ~ 21693197 (-) |
| G865988 | LOC106578276 | other | upstream | 4213502 | 21759124 ~ 21759852 (-) |
| LOC110533434 | LOC106603775 | other | upstream | 91 | 17520259 ~ 17545622 (-) |
