Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110533480 |
| gene name | plekhb1 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 20775913 ~ 20793322 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| plekhb1 | Predicted to be involved in regulation of cell differentiation. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human PLEKHB1 (pleckstrin homology domain containing B1). |
| description |
|---|
| pleckstrin homology domain-containing family B member 1-like |
| id | description |
|---|---|
| K23857 | PLEKHB; pleckstrin homology domain-containing family B |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036989874.1 | False | 1313 | mRNA | 0.48 | 6 | 20775913 | 20793322 |
| XM_021617733.2 | True | 1364 | mRNA | 0.48 | 6 | 20789787 | 20793322 |
20,764,000
20,766,000
20,768,000
20,770,000
20,772,000
20,774,000
20,776,000
20,778,000
20,780,000
20,782,000
20,784,000
20,784,000
20,786,000
20,788,000
20,790,000
20,792,000
20,794,000
20,796,000
20,798,000
20,800,000
20,802,000
20,804,000
NC_048574.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533475 | LOC106603711 | coding | upstream | 154314 | 20604609 ~ 20621599 (+) |
| LOC110534865 | LOC106603713 | coding | upstream | 219257 | 20486356 ~ 20556656 (+) |
| LOC110534864 | LOC106603714 | coding | upstream | 298111 | 20395082 ~ 20477802 (+) |
| LOC110533471 | NA | coding | upstream | 381756 | 20367937 ~ 20394157 (+) |
| LOC110534862 | LOC106603719 | coding | upstream | 468670 | 20120958 ~ 20307243 (+) |
| h3f3c | LOC101073377 | coding | downstream | 1085 | 20794407 ~ 20798473 (+) |
| kptn | kptn | coding | downstream | 29469 | 20822791 ~ 20833204 (+) |
| LOC110533484 | LOC106603702 | coding | downstream | 40724 | 20834046 ~ 20863721 (+) |
| LOC110533486 | LOC105011036 | coding | downstream | 79461 | 20872783 ~ 20877037 (+) |
| zgc:153990 | LOC106603701 | coding | downstream | 84143 | 20877465 ~ 20883905 (+) |
| G864369 | LOC106603709 | non-coding | upstream | 130966 | 20641130 ~ 20644947 (+) |
| G864348 | NA | non-coding | upstream | 179739 | 20591464 ~ 20596174 (+) |
| G864325 | NA | non-coding | upstream | 235292 | 20539376 ~ 20540621 (+) |
| G864246 | NA | non-coding | upstream | 291005 | 20479751 ~ 20484908 (+) |
| G864237 | NA | non-coding | upstream | 402623 | 20372811 ~ 20373290 (+) |
| G864484 | NA | non-coding | downstream | 55467 | 20848789 ~ 20849288 (+) |
| LOC110533488 | LOC106603699 | non-coding | downstream | 128896 | 20916609 ~ 20923158 (+) |
| G864516 | NA | non-coding | downstream | 138938 | 20932260 ~ 20932467 (+) |
| G864517 | NA | non-coding | downstream | 139229 | 20932551 ~ 20932770 (+) |
| G864521 | NA | non-coding | downstream | 152057 | 20945379 ~ 20949594 (+) |
| G864219 | NA | other | upstream | 424348 | 20340382 ~ 20351565 (+) |
| LOC110533468 | NA | other | upstream | 907039 | 19862577 ~ 19890299 (+) |
| LOC110533458 | LOC106603734 | other | upstream | 1258580 | 19515297 ~ 19524114 (+) |
| G863286 | NA | other | upstream | 1359062 | 19416344 ~ 19416851 (+) |
| G864566 | NA | other | downstream | 277491 | 21070813 ~ 21083881 (+) |
| LOC110533503 | LOC106603655 | other | downstream | 692177 | 21444502 ~ 21488968 (+) |
| LOC110533510 | LOC106603660 | other | downstream | 813833 | 21607155 ~ 21654144 (+) |
| ncapd3 | ncapd3 | other | downstream | 2544566 | 23316281 ~ 23349337 (+) |
| LOC110533527 | LOC106603676 | other | downstream | 2951857 | 23561844 ~ 23762824 (+) |
