Item | Value |
---|---|
gene id | LOC110533580 |
gene name | tex14 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048574.1 |
NCBI id | CM023228.2 |
chromosome length | 87811138 |
location | 27330589 ~ 27366556 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
tex14 | Human ortholog(s) of this gene implicated in spermatogenic failure 23. Orthologous to human TEX14 (testis expressed 14, intercellular bridge forming factor). |
description |
---|
inactive serine/threonine-protein kinase TEX14 isoform X5 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036989994.1 | False | 4789 | mRNA | 0.56 | 27 | 27330589 | 27355997 |
XM_021617934.2 | False | 5710 | mRNA | 0.54 | 29 | 27330589 | 27366153 |
XM_036989985.1 | False | 5402 | mRNA | 0.55 | 31 | 27330589 | 27366153 |
XM_036989989.1 | False | 5680 | mRNA | 0.54 | 29 | 27330589 | 27366153 |
XM_036989987.1 | False | 5723 | mRNA | 0.54 | 29 | 27330589 | 27366154 |
XM_036989988.1 | False | 5696 | mRNA | 0.54 | 29 | 27330589 | 27366154 |
XM_036989990.1 | False | 5680 | mRNA | 0.54 | 28 | 27330589 | 27366154 |
XM_036989991.1 | False | 5621 | mRNA | 0.54 | 28 | 27330589 | 27366154 |
XM_036989993.1 | False | 5721 | mRNA | 0.54 | 29 | 27330589 | 27366154 |
XM_036989986.1 | False | 5511 | mRNA | 0.55 | 30 | 27330589 | 27366556 |
XR_002474985.2 | False | 4820 | mRNA | 0.56 | 24 | 27339520 | 27366157 |
XR_005053608.1 | False | 4836 | mRNA | 0.56 | 24 | 27339520 | 27366158 |
XR_005053609.1 | False | 4806 | mRNA | 0.56 | 24 | 27339520 | 27366158 |
TU994221 | True | 760 | TUCP | 0.58 | 2 | 27352393 | 27353246 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110533583 | LOC100196673 | coding | downstream | 18767 | 27305871 ~ 27311822 (-) |
LOC110533581 | gas2l2 | coding | downstream | 25028 | 27289957 ~ 27305561 (-) |
pex12 | pex12 | coding | downstream | 151902 | 27174930 ~ 27178687 (-) |
LOC110533573 | NA | coding | downstream | 235887 | 27092272 ~ 27094702 (-) |
LOC110533571 | LOC106567671 | coding | downstream | 248849 | 27058163 ~ 27081740 (-) |
LOC110534878 | trim37 | coding | upstream | 133038 | 27499594 ~ 27539649 (-) |
LOC110533586 | rabgef1 | coding | upstream | 177498 | 27544054 ~ 27563122 (-) |
kctd7 | LOC106603469 | coding | upstream | 208071 | 27574627 ~ 27578300 (-) |
LOC118936908 | LOC106567662 | coding | upstream | 223217 | 27589773 ~ 27592690 (-) |
LOC110533589 | LOC106603469 | coding | upstream | 257496 | 27624052 ~ 27633778 (-) |
G873273 | NA | non-coding | downstream | 28951 | 27301388 ~ 27301638 (-) |
G873271 | NA | non-coding | downstream | 30648 | 27299604 ~ 27299941 (-) |
G873191 | NA | non-coding | downstream | 157067 | 27173144 ~ 27173522 (-) |
G873192 | NA | non-coding | downstream | 161799 | 27168038 ~ 27168790 (-) |
G873209 | orai2 | non-coding | downstream | 166039 | 27162900 ~ 27164550 (-) |
G873346 | NA | non-coding | upstream | 42214 | 27408770 ~ 27409200 (-) |
G873409 | NA | non-coding | upstream | 130907 | 27497463 ~ 27499392 (-) |
G873431 | NA | non-coding | upstream | 186062 | 27552618 ~ 27552840 (-) |
G873432 | NA | non-coding | upstream | 187745 | 27554301 ~ 27555211 (-) |
LOC110533569 | LOC106567674 | other | downstream | 418963 | 26890009 ~ 26911668 (-) |
G866654 | NA | other | downstream | 5506968 | 21819111 ~ 21823621 (-) |
G865988 | LOC106578276 | other | downstream | 5570737 | 21759124 ~ 21759852 (-) |
G865899 | cssa04h11orf63 | other | downstream | 5637392 | 21691763 ~ 21693197 (-) |
G873784 | LOC106573797 | other | upstream | 216373 | 27582929 ~ 27584262 (-) |
G874706 | NA | other | upstream | 1173673 | 28540229 ~ 28543267 (-) |
G875194 | NA | other | upstream | 1574684 | 28941240 ~ 28985070 (-) |
LOC110533621 | NA | other | upstream | 2548811 | 29906094 ~ 29922728 (-) |
G878962 | NA | other | upstream | 4080926 | 31447482 ~ 31449163 (-) |
G873297 | NA | non-coding | downstream | 15937 | 27334844 ~ 27336456 (-) |