Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110533592 |
| gene name | LOC106568026 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 27880392 ~ 27888907 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | name | namespace |
|---|---|---|
| GO:0005509 | calcium ion binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021617957.2 | True | 758 | mRNA | 0.48 | 6 | 27880392 | 27888907 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ppm1e | ppm1e | coding | upstream | 383655 | 27409651 ~ 27496872 (+) |
| LOC110533582 | rad51c | coding | upstream | 483674 | 27366588 ~ 27396718 (+) |
| LOC110533584 | ska2 | coding | upstream | 549808 | 27309669 ~ 27330584 (+) |
| LOC110533579 | rasl10b | coding | upstream | 592687 | 27272327 ~ 27287705 (+) |
| ap2b1 | ap2b1 | coding | upstream | 611605 | 27177610 ~ 27268794 (+) |
| LOC110533593 | LOC106603472 | coding | downstream | 102773 | 27991680 ~ 28004015 (+) |
| LOC118936920 | LOC106571430 | coding | downstream | 254406 | 28143313 ~ 28144703 (+) |
| LOC110533598 | LOC106603479 | coding | downstream | 273887 | 28162794 ~ 28171287 (+) |
| LOC110534879 | LOC106603480 | coding | downstream | 414007 | 28302914 ~ 28321189 (+) |
| LOC110533601 | LOC106603421 | coding | downstream | 490522 | 28379429 ~ 28388942 (+) |
| G873521 | NA | non-coding | upstream | 177203 | 27702967 ~ 27703189 (+) |
| G873519 | NA | non-coding | upstream | 179799 | 27699799 ~ 27700593 (+) |
| G873517 | NA | non-coding | upstream | 184392 | 27695751 ~ 27696000 (+) |
| G873515 | LOC106603419 | non-coding | upstream | 185848 | 27694156 ~ 27694544 (+) |
| G873514 | NA | non-coding | upstream | 187612 | 27692523 ~ 27692780 (+) |
| G873712 | NA | non-coding | downstream | 87180 | 27976087 ~ 27976327 (+) |
| G873724 | NA | non-coding | downstream | 121206 | 28010113 ~ 28011507 (+) |
| G873728 | LOC106603473 | non-coding | downstream | 125998 | 28014905 ~ 28015174 (+) |
| G873727 | LOC106603473 | non-coding | downstream | 126956 | 28015863 ~ 28016094 (+) |
| G873729 | LOC106603473 | non-coding | downstream | 127504 | 28016411 ~ 28016934 (+) |
| LOC110534876 | LOC106603451 | other | upstream | 1021289 | 26848371 ~ 26860066 (+) |
| ypel2a | LOC106603438 | other | upstream | 1783592 | 26079908 ~ 26096800 (+) |
| G870863 | NA | other | upstream | 2055004 | 25820346 ~ 25825388 (+) |
| G874108 | pgk | other | downstream | 200999 | 28089906 ~ 28117360 (+) |
| G874438 | LOC106603484 | other | downstream | 667633 | 28556540 ~ 28557644 (+) |
| G874378 | NA | other | downstream | 688545 | 28577452 ~ 28584415 (+) |
| G874510 | NA | other | downstream | 838867 | 28727774 ~ 28738905 (+) |
