Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110533599 |
| gene name | LOC106603477 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 28171634 ~ 28217129 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific-like |
| id | description |
|---|---|
| K15588 | NSD1; [histone H3]-lysine36 N-dimethyltransferase NSD1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021617970.2 | False | 10066 | mRNA | 0.48 | 23 | 28171634 | 28214344 |
| XM_036990008.1 | False | 9913 | mRNA | 0.48 | 23 | 28171634 | 28214344 |
| XM_021617971.2 | False | 9851 | mRNA | 0.48 | 23 | 28171634 | 28214345 |
| XM_036990007.1 | True | 9757 | mRNA | 0.48 | 23 | 28171634 | 28217129 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533597 | LOC106603476 | coding | downstream | 19347 | 28149090 ~ 28152287 (-) |
| LOC110533596 | LOC106603475 | coding | downstream | 41369 | 28128521 ~ 28130265 (-) |
| LOC110533595 | pgk | coding | downstream | 54238 | 28089899 ~ 28117396 (-) |
| LOC110533594 | LOC105011118 | coding | downstream | 105841 | 28010251 ~ 28065793 (-) |
| LOC110534912 | LOC106603420 | coding | downstream | 188964 | 27980733 ~ 27982670 (-) |
| LOC110533600 | LOC106603481 | coding | upstream | 144847 | 28361976 ~ 28379362 (-) |
| LOC110533602 | NA | coding | upstream | 171960 | 28388354 ~ 28399671 (-) |
| LOC110533605 | LOC106603484 | coding | upstream | 332334 | 28549463 ~ 28560015 (-) |
| LOC110533606 | LOC106603485 | coding | upstream | 362304 | 28579433 ~ 28624349 (-) |
| arl10 | LOC106603486 | coding | upstream | 426440 | 28643569 ~ 28648218 (-) |
| G874237 | NA | non-coding | downstream | 350 | 28169421 ~ 28171284 (-) |
| G874178 | NA | non-coding | downstream | 18701 | 28152530 ~ 28152933 (-) |
| G874167 | NA | non-coding | downstream | 48313 | 28123067 ~ 28123321 (-) |
| G874162 | NA | non-coding | downstream | 53738 | 28117682 ~ 28117896 (-) |
| G874265 | NA | non-coding | upstream | 6250 | 28223379 ~ 28223586 (-) |
| G874277 | NA | non-coding | upstream | 17827 | 28234956 ~ 28235195 (-) |
| G874278 | NA | non-coding | upstream | 18278 | 28235407 ~ 28235703 (-) |
| G874592 | NA | non-coding | upstream | 85882 | 28303011 ~ 28306021 (-) |
| G874626 | NA | non-coding | upstream | 147456 | 28364585 ~ 28386099 (-) |
| G873784 | LOC106573797 | other | downstream | 587372 | 27582929 ~ 27584262 (-) |
| LOC110533580 | tex14 | other | downstream | 818388 | 27330589 ~ 27366556 (-) |
| G873209 | orai2 | other | downstream | 1007084 | 27162900 ~ 27164550 (-) |
| LOC110533569 | LOC106567674 | other | downstream | 1260008 | 26890009 ~ 26911668 (-) |
| G866654 | NA | other | downstream | 6348013 | 21819111 ~ 21823621 (-) |
| G874706 | NA | other | upstream | 323100 | 28540229 ~ 28543267 (-) |
| G875194 | NA | other | upstream | 724111 | 28941240 ~ 28985070 (-) |
| LOC110533621 | NA | other | upstream | 1698238 | 29906094 ~ 29922728 (-) |
| G878962 | NA | other | upstream | 3230353 | 31447482 ~ 31449163 (-) |
| G879440 | LOC106603524 | other | upstream | 4008303 | 32225432 ~ 32225936 (-) |
