Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110533616 |
| gene name | LOC106603491 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 29531930 ~ 29555369 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein FAM114A2-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021618013.2 | False | 2336 | mRNA | 0.45 | 14 | 29531930 | 29555366 |
| XM_021618014.2 | False | 2316 | mRNA | 0.45 | 14 | 29531930 | 29555369 |
| XM_021618015.2 | True | 1673 | mRNA | 0.49 | 14 | 29532614 | 29555366 |
29,512,000
29,516,000
29,520,000
29,524,000
29,528,000
29,532,000
29,536,000
29,540,000
29,544,000
29,548,000
29,552,000
29,556,000
29,560,000
NC_048574.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cnot8 | LOC106603492 | coding | downstream | 1391 | 29525965 ~ 29530539 (-) |
| LOC110533613 | LOC106603489 | coding | downstream | 365130 | 28908391 ~ 29166800 (-) |
| LOC110533612 | LOC106603488 | coding | downstream | 716426 | 28731803 ~ 28815504 (-) |
| arl10 | LOC106603486 | coding | downstream | 883712 | 28643569 ~ 28648218 (-) |
| LOC110533606 | LOC106603485 | coding | downstream | 907581 | 28579433 ~ 28624349 (-) |
| LOC118966732 | NA | coding | upstream | 282689 | 29838058 ~ 29838736 (-) |
| tbx16l | LOC106603496 | coding | upstream | 327296 | 29882665 ~ 29899849 (-) |
| LOC110533621 | NA | coding | upstream | 350725 | 29906094 ~ 29922728 (-) |
| trpv1 | trpv1 | coding | upstream | 435183 | 29990552 ~ 30010544 (-) |
| LOC110534880 | NA | coding | upstream | 462092 | 30017461 ~ 30020700 (-) |
| G875846 | NA | non-coding | downstream | 36362 | 29495236 ~ 29495568 (-) |
| G875834 | NA | non-coding | downstream | 52990 | 29478674 ~ 29478940 (-) |
| G875701 | NA | non-coding | downstream | 71603 | 29459984 ~ 29460327 (-) |
| G875700 | NA | non-coding | downstream | 72058 | 29459597 ~ 29459872 (-) |
| G875687 | NA | non-coding | downstream | 79341 | 29452382 ~ 29452589 (-) |
| G875902 | NA | non-coding | upstream | 25737 | 29581106 ~ 29608132 (-) |
| G875916 | NA | non-coding | upstream | 43601 | 29598970 ~ 29639749 (-) |
| G875942 | NA | non-coding | upstream | 86445 | 29641814 ~ 29642038 (-) |
| G875976 | NA | non-coding | upstream | 109826 | 29665195 ~ 29665517 (-) |
| G876878 | NA | non-coding | upstream | 152394 | 29707763 ~ 29707978 (-) |
| G875194 | NA | other | downstream | 546860 | 28941240 ~ 28985070 (-) |
| G874706 | NA | other | downstream | 988663 | 28540229 ~ 28543267 (-) |
| G873784 | LOC106573797 | other | downstream | 1947668 | 27582929 ~ 27584262 (-) |
| LOC110533580 | tex14 | other | downstream | 2178684 | 27330589 ~ 27366556 (-) |
| G873209 | orai2 | other | downstream | 2367380 | 27162900 ~ 27164550 (-) |
| G878962 | NA | other | upstream | 1892113 | 31447482 ~ 31449163 (-) |
| G879440 | LOC106603524 | other | upstream | 2670063 | 32225432 ~ 32225936 (-) |
| LOC110533652 | LOC106603525 | other | upstream | 2691642 | 32246991 ~ 32353202 (-) |
| G879617 | NA | other | upstream | 3030522 | 32585891 ~ 32588838 (-) |
