Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118966732 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 29838058 ~ 29838736 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | name | namespace |
|---|---|---|
| GO:0006836 | neurotransmitter transport | biological_process |
| GO:0035725 | sodium ion transmembrane transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005328 | neurotransmitter | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005053614.1 | True | 477 | mRNA | 0.45 | 2 | 29838058 | 29838736 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533616 | LOC106603491 | coding | downstream | 282689 | 29531930 ~ 29555369 (-) |
| cnot8 | LOC106603492 | coding | downstream | 307519 | 29525965 ~ 29530539 (-) |
| LOC110533613 | LOC106603489 | coding | downstream | 671258 | 28908391 ~ 29166800 (-) |
| LOC110533612 | LOC106603488 | coding | downstream | 1022554 | 28731803 ~ 28815504 (-) |
| arl10 | LOC106603486 | coding | downstream | 1189840 | 28643569 ~ 28648218 (-) |
| tbx16l | LOC106603496 | coding | upstream | 43929 | 29882665 ~ 29899849 (-) |
| LOC110533621 | NA | coding | upstream | 67358 | 29906094 ~ 29922728 (-) |
| trpv1 | trpv1 | coding | upstream | 151816 | 29990552 ~ 30010544 (-) |
| LOC110534880 | NA | coding | upstream | 178725 | 30017461 ~ 30020700 (-) |
| LOC110533626 | LOC106603501 | coding | upstream | 183557 | 30022293 ~ 30041092 (-) |
| G876961 | NA | non-coding | downstream | 3533 | 29833388 ~ 29834525 (-) |
| G876934 | NA | non-coding | downstream | 52929 | 29782152 ~ 29785129 (-) |
| G876895 | NA | non-coding | downstream | 107325 | 29730495 ~ 29730733 (-) |
| G876894 | NA | non-coding | downstream | 110045 | 29727796 ~ 29728013 (-) |
| G876893 | NA | non-coding | downstream | 110372 | 29727447 ~ 29727686 (-) |
| G876955 | NA | non-coding | upstream | 41507 | 29880243 ~ 29881512 (-) |
| G876953 | NA | non-coding | upstream | 66649 | 29905385 ~ 29905984 (-) |
| G877065 | NA | non-coding | upstream | 142711 | 29981447 ~ 29986395 (-) |
| G875194 | NA | other | downstream | 852988 | 28941240 ~ 28985070 (-) |
| G874706 | NA | other | downstream | 1294791 | 28540229 ~ 28543267 (-) |
| G873784 | LOC106573797 | other | downstream | 2253796 | 27582929 ~ 27584262 (-) |
| LOC110533580 | tex14 | other | downstream | 2484812 | 27330589 ~ 27366556 (-) |
| G873209 | orai2 | other | downstream | 2673508 | 27162900 ~ 27164550 (-) |
| G878962 | NA | other | upstream | 1608746 | 31447482 ~ 31449163 (-) |
| G879440 | LOC106603524 | other | upstream | 2386696 | 32225432 ~ 32225936 (-) |
| LOC110533652 | LOC106603525 | other | upstream | 2408275 | 32246991 ~ 32353202 (-) |
| G879617 | NA | other | upstream | 2747155 | 32585891 ~ 32588838 (-) |
