LOC110533664 (LOC106603537)


Basic Information

Item Value
gene id LOC110533664
gene name LOC106603537
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 32639570 ~ 32779932 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021618096.2
GCCACTgaccggcagtgggagaagatggaacaaGATGGAATTTGGCCTACATTTTGCAaattttctcatcgatgaaacatttaaTTTCAATACAGTTTTTGTTCCCAAAACTAACAACTGTTATGAAAAGAGTAGACTACGTTTTGTAGACTTTGCCCTTTGAAAAAGTTTTAGAAAATCGCAATTTTTAGGAGTGCAGAGGCGAATTTAGTTATTGCAAACGCACAGGCGtcccctaacggaaatatgcagatgATGCTAGatcgcgccaataggatctcgctagatGTCTGCCCACTGACTCAGTTGTTCCCGTTGGATATGTGGACTGTGGTCAATCTTGGTTTAGTTACAAAAATATTTGTTGTCACCATCAGCGAATGATACATCATTGGTCGCCATGCATAAACACCCACTTCCTCATATTGCAGCTCTAGAGGTTTGTCTCTCCGCCCCTTTCTTTGTGATAGACATATTTGACAAATAGCAATGAATAAATCGAACGAAGAGTAACTCCTTCATTTGACAGGCACAGCCGTGGACCAATCAGTGATCTACTGGTGCTGCCCTCTAACAGACCGAAAGCTACCTGAGCAAGTCCTACTTTGTTTATgtcacatagctagctagctacatagctTGCTAACTGACAGCTTCAAGAGTGCTGTTTTCTTACGAACGTTCGCTACACCGATGCATACATTTCTGCCGTAGAAGTTAAATCTAGATGTACAGGATCTGGGTTTGATCGGTGGCAGGGCTGAGATGTTTTGTTGAATGAAGGAGCGAACGCCCTGGTGCCGTTAGGAGAATGAACTCCATCACCGGTCGGGATCACCCTGTCAACTCTGGAGCTTCATCTTCTCGAGCCTTGCACGTTGAGCTCACATCTCAGCAGAGGCGGTTACGTCATCTCAGAAGCATTGCAGCCCGCAACATTGTCAACAAGAATGGCTCTCCACTACTGGACACATATTTTACACTTCATCTCTGCTTAGAGGACCGGATATCCAGAGACTTTTACAAGAGTGAGGTCATCCGAGATTCATTGAATCCAACATGGCGGAGCCTGGATTTTGGCATGCTGCCGGACCTCCTGGACACGTCTGTGTCCTGCTTTGTGGTGAAGATCTGGGGTGGCCGAGAGGAACAGTTCATACTTCTCATAGAGTGGAAGGTCAACCTGGACGGGCTTAGATACACAGGGCAACAGATCCGCTCCAGGAATCCAAATGAGATCATATTTGGATTGAATGATGGCTACTATGCAGCTGACTTTGATCATAAGGACCACTCTGAGAGGAAGAAGAACAGTTTACTCCAGGTGGACCAGAGTTCAGTGAGGAACTCCTACAGTGTCTTCTCTCTGCTGAGGCTCCACACGGCCCAGAGAGCCATCAAGCAGACCCAGGTGACCGTGCAGAAGATCGGCAAGGATATTGAGGAGAAACTGAGGACGACAACGGCCTGCACCAAGCGTAAGAAGGAGCGGGAGTGTATGCAGCTGCGCCTGGGAACGCTACGCAGTgagctggagagacagaggaaagcgCTGGGCCGGGAGACAGACCTGCGGCAGAAGGAGAAAGCAGTGCTTCAGAAGAAAGAGGAAGCATTCTCCACCAAACACCGGAGTCTGGAGCTTGAGAGGGAGTCGTTAACAGAGCAGCAGAAAGAATGCACTGCCAAAAGGGAGCTGTTCCTCAAGTCCAATGCTCAGCTCACCTTCCGCTGTCGTCAGCTCCTCTCTGAGCTGTCCTACATCTACCCCATCGACTTGGTCACCACGGCCGCTAATCAGTCCGATTATGTCATCTGTGGAGTGAAGCTGCCCAACTCGGAGGATTTCCAAGCGTTGAGTGGCTTCCCATCCCCTGTGGAGGTGTGCGGCTGCTTCGCGCTTCGGGGGTGGTGTAAATCTACGAAGGATGATGGGAGCGTGGCGGTTGCCCTGGGTTACACGGCCCACCTGGTGCTGATGATCAGCTGCTTCTTGCAGATCCCTCTTAGATATCCTGTCATCCACAAGGGTTCCCGCTCCTCCATCAAGGACACCATCACAGACAAGCtcagcgagaaggagagagaATTCCCCCTGTACCCTCGAGGAGAACGCTTTCAGTTTGAATATGGAGTCTACCTGATCAACAAGAACATCGCCCAGCTGAGATACCAGCATGGCCTGTCCACTCCAGACCTCCGTCAGACCCTGCCCAACCTCAAGAACTTCCTGGAGCACGGCCTTCTAGTCCGATGtGACCGGCACCatgtctccagctccatcccgGTCCCGACAGGAGCCAAGTCTCAGCTCAGTGTCTCGGCTGCGTCCGAAGTGGGCTTCCCCACCCACACCAGCTCTCCAGATCCGGGCTCACTGAGGAAAAGGGCCAGTTCCGAGGCAGACAAGCAGAAGTACAAGGCCTCCCCTCCTCCCAGCTACGACACGACCATGTCCATGGACCAGCCCCAGAGTGCACCGCCCGACCCCAACCCCTCCCCCAAGCACTTGTCCTCCTCCCTGGACTCTAgcattgacctggccaagactCTGGAGGTTCAGGGACCAGCCCTgggggagggagaacgagaggtagaaagagaggtaAAGGAGGTTGTGGAGGAGCAAGAGCAACAGCCCTCCGGCACTACCACAGGAGGCTCAGATTCCCCCACTCCGGCTGGAAGCACCACCAGTGAGCAGCATGCAGACCATACCATGAACGGCTCAGTAGTGCCAGGCGAGGAGCTGGGGGGGCCCGCAACAGGGCTAATGTTGACCATAGCATTAAACCCAGAGATGTGCTGCTCAGTGGAGCAGGCAGAGGAGATTATGGGGACAGAGGCCACAGGCCTGGGTTTAGGGATGGGCCTTGTGGATGGGGCCAGGCTGGAGGACTACCCCTGCATCCCCGTGGAGCACGCCGTGGCCGTGGAGTGTGACGAGCAGGTTCTGGGCGAGCTGGATGCCGCCGGCTTCGAGGAGTTCTCCCGCCGCATCTATGCACTAAACGAGAACATGTCCAGCTTCCGCAGGCCACGCAAGAACTCTGAGAAGTGAGGACAGGTGGGACCTTAGGGGTGAGGACAGGAGTCACATGGCACATGAGTCAGGGACATGAACATAGTGCGGGGGGGGGTCCTGTGTGTGTGCTTTGGTGTGATTGTCCCTCTCCCCAAGCAgcaatagaaaaacaaacataggcGCTACATTATCTGGAATGATGACCAATTTGCACTTCTCGAAAAATATTTCTAGAATCCTTTAAATGAAATAAAGCGAATGTTTGTGATTGAAACGCTTCCTGGGCCTTCTTCTTTCAGGGTgcatggagagtgtgtgtgtggtaactaCACACATAAAATGCATCCTTCCTTGAAGTAAGCAGTAATCTAACATGAGTGGGTTCATGAAAGCTATAGTCCCTACTTGTACCTGTACAGTCCTGCTAAATCAGTAATGACTTAAAGGGAATGAGGAAGGAAAGGTTAATTAGAACAGATCCAAAGCCAGAGCCATGGCTGACAAAGGAAATTACTTACAGCAAAGACCTATCCCACCTCTGACCTCTGTCACCTATTAGGAAACCGACCAGTCACTAGGCCAGGGCAGCTTAGACCGTTGGCCCAATCAGATACTCCATAACTGTTACACCTTGCACCTCCAGGTCCATCAAACCCACCAGCCATTGGACAGGGCTGCCCTGTCTCTATCTCCAGGGGCCATCACTGTTCTGTTCTGGTTGAGTACgagaagagaaaagaaaagagaggagcaAAGCAGGCAGGCTTGAGCTCATGGCACATGGCAGGGATACAGTGCAATTTTTCTGGCTTTCTCCTCCATACCTGCTTTCTCCTTATTTGACTATTTTAATAAGCACCATTGATATAAGTATTGATATGAAGTCCAATTATCCAGATATTATTCAATAGACCAAAACATGAATGATGTGTACTGTATGCTGTTGAAATGTTGCACTCAGACCCTACATATTAATGACACATAATGaccttttttacattttagtccgCTTATCTATTTTGTCCGCTTTCTTTTTCTTTTCCCTGTTGAACTACTTTTTGTTTTCTTGCGTTGGTGTCCATTGGCCACTATGTGTGTTATCTATGTCTCTCActgcatttgtttgtttgtttgcttgttttAAAGGAAATCATGGTTTCTCTTTTCATCTCATGGGCAGTCAGTCATTCATTGATATTGTCAAGTGTTAATGGTCATCAGCCCTGGGTTCAAATCTTttaaatatgtacatataatCTGGATCTAACTGTGTCCCCTCTGGAAAGGACCAGAGATCCCTGTAGACAGAAGCTGATATGGACAACTGATTTACATACTGCCCACCGTATACAACATAGATGGACTCGCAACAAGCCCCCTAAAAACATcccaatttttatttttattttttttttgggggggggggggggggggtgtattatgATCAAGTACTGTGGTGGATGTTGAAATGTATTGTATTTAAAATGAGAGATTAAACAATTGTAGGTCATTTCCATTAAATGCTATACAGCATGTGACCTTGTACATATACTTTTGTATGGAGTTTTTTGTTAATAAAGACTTACAGTCCAATAGCATGGATGTATGTAGCCCCGTT
>XM_021618097.2
CACTgaccggcagtgggagaagatggaacaaGATGGAATTTGGCCTACATTTTGCAaattttctcatcgatgaaacatttaaTTTCAATACAGTTTTTGTTCCCAAAACTAACAACTGTTATGAAAAGAGTAGACTACGTTTTGTAGACTTTGCCCTTTGAAAAAGTTTTAGAAAATCGCAATTTTTAGGAGTGCAGAGGCGAATTTAGTTATTGCAAACGCACAGGCGtcccctaacggaaatatgcagatgATGCTAGatcgcgccaataggatctcgctagatGTCTGCCCACTGACTCAGTTGTTCCCGTTGGATATGTGGACTGTGGTCAATCTTGGTTTAGTTACAAAAATATTTGTTGTCACCATCAGCGAATGATACATCATTGGTCGCCATGCATAAACACCCACTTCCTCATATTGCAGCTCTAGAGGTTTGTCTCTCCGCCCCTTTCTTTGTGATAGACATATTTGACAAATAGCAATGAATAAATCGAACGAAGAGTAACTCCTTCATTTGACAGGCACAGCCGTGGACCAATCAGTGATCTACTGGTGCTGCCCTCTAACAGACCGAAAGCTACCTGAGCAAGTCCTACTTTGTTTATgtcacatagctagctagctacatagctTGCTAACTGACAGCTTCAAGAGTGCTGTTTTCTTACGAACGTTCGCTACACCGATGCATACATTTCTGCCGTAGAAGTTAAATCTAGATGTACAGGATCTGGGTTTGATCGGTGGCAGGGCTGAGATGTTTTGTTGAATGAAGGAGCGAACGCCCTGGTGCCGTTAGGAGAATGAACTCCATCACCGGTCGGGATCACCCTGTCAACTCTGGAGCTTCATCTTCTCGAGCCTTGCACGTTGAGCTCACATCTCAGCAGAGGCGGTTACGTCATCTCAGAAGCATTGCAGCCCGCAACATTGTCAACAAGAATGGCTCTCCACTACTGGACACATATTTTACACTTCATCTCTGCTTAGAGGACCGGATATCCAGAGACTTTTACAAGAGTGAGGTCATCCGAGATTCATTGAATCCAACATGGCGGAGCCTGGATTTTGGCATGCTGCCGGACCTCCTGGACACGTCTGTGTCCTGCTTTGTGGTGAAGATCTGGGGTGGCCGAGAGGAACAGTTCATACTTCTCATAGAGTGGAAGGTCAACCTGGACGGGCTTAGATACACAGGGCAACAGATCCGCTCCAGGAATCCAAATGAGATCATATTTGGATTGAATGATGGCTACTATGCAGCTGACTTTGATCATAAGGACCACTCTGAGAGGAAGAAGAACAGTTTACTCCAGGTGGACCAGAGTTCAGTGAGGAACTCCTACAGTGTCTTCTCTCTGCTGAGGCTCCACACGGCCCAGAGAGCCATCAAGCAGACCCAGGTGACCGTGCAGAAGATCGGCAAGGATATTGAGGAGAAACTGAGGACGACAACGGCCTGCACCAAGCGTAAGAAGGAGCGGGAGTGTATGCAGCTGCGCCTGGGAACGCTACGCAGTgagctggagagacagaggaaagcgCTGGGCCGGGAGACAGACCTGCGGCAGAAGGAGAAAGCAGTGCTTCAGAAGAAAGAGGAAGCATTCTCCACCAAACACCGGAGTCTGGAGCTTGAGAGGGAGTCGTTAACAGAGCAGCAGAAAGAATGCACTGCCAAAAGGGAGCTGTTCCTCAAGTCCAATGCTCAGCTCACCTTCCGCTGTCGTCAGCTCCTCTCTGAGCTGTCCTACATCTACCCCATCGACTTGGTCACCACGGCCGCTAATCAGTCCGATTATGTCATCTGTGGAGTGAAGCTGCCCAACTCGGAGGATTTCCAAGCGAAGGATGATGGGAGCGTGGCGGTTGCCCTGGGTTACACGGCCCACCTGGTGCTGATGATCAGCTGCTTCTTGCAGATCCCTCTTAGATATCCTGTCATCCACAAGGGTTCCCGCTCCTCCATCAAGGACACCATCACAGACAAGCtcagcgagaaggagagagaATTCCCCCTGTACCCTCGAGGAGAACGCTTTCAGTTTGAATATGGAGTCTACCTGATCAACAAGAACATCGCCCAGCTGAGATACCAGCATGGCCTGTCCACTCCAGACCTCCGTCAGACCCTGCCCAACCTCAAGAACTTCCTGGAGCACGGCCTTCTAGTCCGATGtGACCGGCACCatgtctccagctccatcccgGTCCCGACAGGAGCCAAGTCTCAGCTCAGTGTCTCGGCTGCGTCCGAAGTGGGCTTCCCCACCCACACCAGCTCTCCAGATCCGGGCTCACTGAGGAAAAGGGCCAGTTCCGAGGCAGACAAGCAGAAGTACAAGGCCTCCCCTCCTCCCAGCTACGACACGACCATGTCCATGGACCAGCCCCAGAGTGCACCGCCCGACCCCAACCCCTCCCCCAAGCACTTGTCCTCCTCCCTGGACTCTAgcattgacctggccaagactCTGGAGGTTCAGGGACCAGCCCTgggggagggagaacgagaggtagaaagagaggtaAAGGAGGTTGTGGAGGAGCAAGAGCAACAGCCCTCCGGCACTACCACAGGAGGCTCAGATTCCCCCACTCCGGCTGGAAGCACCACCAGTGAGCAGCATGCAGACCATACCATGAACGGCTCAGTAGTGCCAGGCGAGGAGCTGGGGGGGCCCGCAACAGGGCTAATGTTGACCATAGCATTAAACCCAGAGATGTGCTGCTCAGTGGAGCAGGCAGAGGAGATTATGGGGACAGAGGCCACAGGCCTGGGTTTAGGGATGGGCCTTGTGGATGGGGCCAGGCTGGAGGACTACCCCTGCATCCCCGTGGAGCACGCCGTGGCCGTGGAGTGTGACGAGCAGGTTCTGGGCGAGCTGGATGCCGCCGGCTTCGAGGAGTTCTCCCGCCGCATCTATGCACTAAACGAGAACATGTCCAGCTTCCGCAGGCCACGCAAGAACTCTGAGAAGTGAGGACAGGTGGGACCTTAGGGGTGAGGACAGGAGTCACATGGCACATGAGTCAGGGACATGAACATAGTGCGGGGGGGGGTCCTGTGTGTGTGCTTTGGTGTGATTGTCCCTCTCCCCAAGCAgcaatagaaaaacaaacataggcGCTACATTATCTGGAATGATGACCAATTTGCACTTCTCGAAAAATATTTCTAGAATCCTTTAAATGAAATAAAGCGAATGTTTGTGATTGAAACGCTTCCTGGGCCTTCTTCTTTCAGGGTgcatggagagtgtgtgtgtggtaactaCACACATAAAATGCATCCTTCCTTGAAGTAAGCAGTAATCTAACATGAGTGGGTTCATGAAAGCTATAGTCCCTACTTGTACCTGTACAGTCCTGCTAAATCAGTAATGACTTAAAGGGAATGAGGAAGGAAAGGTTAATTAGAACAGATCCAAAGCCAGAGCCATGGCTGACAAAGGAAATTACTTACAGCAAAGACCTATCCCACCTCTGACCTCTGTCACCTATTAGGAAACCGACCAGTCACTAGGCCAGGGCAGCTTAGACCGTTGGCCCAATCAGATACTCCATAACTGTTACACCTTGCACCTCCAGGTCCATCAAACCCACCAGCCATTGGACAGGGCTGCCCTGTCTCTATCTCCAGGGGCCATCACTGTTCTGTTCTGGTTGAGTACgagaagagaaaagaaaagagaggagcaAAGCAGGCAGGCTTGAGCTCATGGCACATGGCAGGGATACAGTGCAATTTTTCTGGCTTTCTCCTCCATACCTGCTTTCTCCTTATTTGACTATTTTAATAAGCACCATTGATATAAGTATTGATATGAAGTCCAATTATCCAGATATTATTCAATAGACCAAAACATGAATGATGTGTACTGTATGCTGTTGAAATGTTGCACTCAGACCCTACATATTAATGACACATAATGaccttttttacattttagtccgCTTATCTATTTTGTCCGCTTTCTTTTTCTTTTCCCTGTTGAACTACTTTTTGTTTTCTTGCGTTGGTGTCCATTGGCCACTATGTGTGTTATCTATGTCTCTCActgcatttgtttgtttgtttgcttgttttAAAGGAAATCATGGTTTCTCTTTTCATCTCATGGGCAGTCAGTCATTCATTGATATTGTCAAGTGTTAATGGTCATCAGCCCTGGGTTCAAATCTTttaaatatgtacatataatCTGGATCTAACTGTGTCCCCTCTGGAAAGGACCAGAGATCCCTGTAGACAGAAGCTGATATGGACAACTGATTTACATACTGCCCACCGTATACAACATAGATGGACTCGCAACAAGCCCCCTAAAAACATcccaatttttatttttattttttttttgggggggggggggggggggtgtattatgATCAAGTACTGTGGTGGATGTTGAAATGTATTGTATTTAAAATGAGAGATTAAACAATTGTAGGTCATTTCCATTAAATGCTATACAGCATGTGACCTTGTACATATACTTTTGTATGGAGTTTTTTGTTAATAAAGACTTACAGTCCAATAGCATGGATGTATGTAGCCCCGTT

Function

NR:

description
UV radiation resistance-associated gene protein-like isoform X2

GO: NA

KEGG:

id description
K21249 UVRAG; UV radiation resistance-associated gene protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021618096.2 False 4643 mRNA 0.49 16 32639570 32779932
XM_021618097.2 True 4572 mRNA 0.49 15 32639572 32779932

Neighbor

gene id symbol gene type direction distance location
LOC110533663 LOC106603538 coding upstream 4475 32599894 ~ 32635095 (+)
LOC110533662 mog2a coding upstream 48204 32565890 ~ 32591366 (+)
LOC110534887 LOC106603535 coding upstream 120183 32505369 ~ 32519387 (+)
LOC110533659 NA coding upstream 142184 32493717 ~ 32497386 (+)
LOC110533658 LOC106603532 coding upstream 151557 32486008 ~ 32488013 (+)
LOC110533671 LOC106603546 coding downstream 229455 32981866 ~ 33045499 (+)
LOC110534913 LOC106603425 coding downstream 281479 33061411 ~ 33063183 (+)
LOC110533672 LOC106603547 coding downstream 350911 33130843 ~ 33140211 (+)
samsn1b LOC106603553 coding downstream 688432 33468364 ~ 33492333 (+)
serpinh1a serph coding downstream 773376 33553308 ~ 33557914 (+)
G878669 NA non-coding upstream 96849 32542192 ~ 32542721 (+)
G878559 NA non-coding upstream 260615 32378322 ~ 32378955 (+)
G878551 NA non-coding upstream 280469 32358192 ~ 32359101 (+)
G878483 NA non-coding upstream 393442 32245821 ~ 32246128 (+)
G878479 NA non-coding upstream 398330 32240989 ~ 32241240 (+)
G878720 NA non-coding downstream 2524 32782456 ~ 32782831 (+)
G878792 NA non-coding downstream 8257 32788189 ~ 32788420 (+)
G879788 NA non-coding downstream 37017 32816949 ~ 32817180 (+)
G879832 NA non-coding downstream 96313 32876245 ~ 32902669 (+)
G879846 LOC106603541 non-coding downstream 154264 32934196 ~ 32936615 (+)
LOC110534883 med13 other upstream 1316970 31241426 ~ 31382578 (+)
G877809 NA other upstream 1434152 31205083 ~ 31205418 (+)
LOC110533640 LOC106603515 other upstream 1883914 30748439 ~ 30771331 (+)
G876079 ubb other upstream 2589517 30020641 ~ 30050053 (+)
G880069 NA other downstream 520833 33300765 ~ 33301738 (+)
LOC110533688 NA other downstream 1264562 34044472 ~ 34047724 (+)
hsd20b2 LOC106603577 other downstream 1654610 34422538 ~ 34435620 (+)

Expression


Co-expression Network