Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118936922 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 33700572 ~ 33702711 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005034352.1 | True | 621 | mRNA | 0.51 | 3 | 33700572 | 33702711 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tmprss2 | tmps2 | coding | upstream | 21722 | 33665119 ~ 33678850 (+) |
| acat1 | acat1 | coding | upstream | 53260 | 33630484 ~ 33647312 (+) |
| LOC100136017 | mmp13 | coding | upstream | 79450 | 33616384 ~ 33621122 (+) |
| acer3 | LOC106603557 | coding | upstream | 107480 | 33575409 ~ 33593092 (+) |
| LOC110533682 | NA | coding | upstream | 131342 | 33568437 ~ 33569230 (+) |
| dscama | LOC105030490 | coding | downstream | 27554 | 33730265 ~ 33913890 (+) |
| LOC110533688 | NA | coding | downstream | 341761 | 34044472 ~ 34047724 (+) |
| LOC110533689 | NA | coding | downstream | 387026 | 34089737 ~ 34120835 (+) |
| LOC110533691 | LOC106603565 | coding | downstream | 420010 | 34122721 ~ 34141656 (+) |
| LOC110533692 | LOC106603566 | coding | downstream | 479301 | 34182012 ~ 34184477 (+) |
| G880234 | NA | non-coding | upstream | 137722 | 33530649 ~ 33562850 (+) |
| samsn1b | LOC106603553 | non-coding | upstream | 208239 | 33468364 ~ 33492333 (+) |
| G880152 | NA | non-coding | upstream | 286636 | 33413696 ~ 33413936 (+) |
| G880151 | NA | non-coding | upstream | 286969 | 33413327 ~ 33413603 (+) |
| G880148 | NA | non-coding | upstream | 290755 | 33409560 ~ 33409817 (+) |
| G880338 | NA | non-coding | downstream | 4953 | 33707664 ~ 33707872 (+) |
| G880339 | NA | non-coding | downstream | 6384 | 33709095 ~ 33737521 (+) |
| G880373 | NA | non-coding | downstream | 55837 | 33758548 ~ 33759801 (+) |
| G880468 | NA | non-coding | downstream | 236724 | 33939435 ~ 33973224 (+) |
| G880069 | NA | other | upstream | 398834 | 33300765 ~ 33301738 (+) |
| LOC110533672 | LOC106603547 | other | upstream | 565658 | 33130843 ~ 33140211 (+) |
| LOC110533671 | LOC106603546 | other | upstream | 655073 | 32981866 ~ 33045499 (+) |
| LOC110534883 | med13 | other | upstream | 2377972 | 31241426 ~ 31382578 (+) |
| G877809 | NA | other | upstream | 2495154 | 31205083 ~ 31205418 (+) |
| hsd20b2 | LOC106603577 | other | downstream | 731831 | 34422538 ~ 34435620 (+) |
| LOC110533705 | LOC106603578 | other | downstream | 734629 | 34437126 ~ 34443357 (+) |
| rnasekb | rnasek | other | downstream | 756083 | 34458769 ~ 34472268 (+) |
| LOC110534915 | rps17 | other | downstream | 784109 | 34486712 ~ 34488757 (+) |
