LOC110533693



Basic Information


Item Value
gene id LOC110533693
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 34269661 ~ 34270652 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_021618148.2
CGCCCCTCAGATGGAGAACCATACATACAATGCGCATGTTCTCCTCCTAGAGGGGTTAAACGTCACCCACCAGTCCTCCTACCCTGCCTTCATCATCCTCCTTGTTATCTACATCTTCACAATGGTGGCCAACATCAGCCTCGCAGTGGTGATCTGCATGGAGAGGAGCCTGCACCAGCCCATGTACATCCTCCTTTGCAACATGTCTTTCAACGATGCTCTCAGCATCACCACCTTCATACCTCGAGCGCTGAGTGATATTTTCAAAGCAAGTGCAGAAAGATATATTACCTATGTTGAGTGTGCCATACAAGCGTTCTGCGGTCACATGTTTGCTACGACCGGACATACAATACTAATGATCATGGCTTTTGACAGGTATATGGCCATCTGCAACCCTTTGCGATACGCCACCATCATGAACAACAAAATGCTGGTAaaactgtgtgtgtttgcctggggTGTGGCATTTCTCTTTGTGGCGGTCCTTATAGGTCTCTCTGTCCGCTTATCACGCTGCAGGTCAAACGTTTTCAATCCTTTCTGTGACAACGCTTCGTTATTCAAGCTCTCCTGTGAGAGTGTGTTTATAAATGACATATACGGACTCTTTTTCACTGCGCTCCTTTTTATCGCCTCCATTTTGAGTGTGTCTCTGACATACATTAGGATCACCATGGTGTGTGTGCGGAGTAAGAGCAAGTCGCTGAACAGCAAAGCCCTGAACACTTGTTTCACACACCTGGCTGTATACGTCATCATGCTGATGACAGGTTTCATCATTGTCTTTCTTCATCGGTACCCACAGTGGTCAAATCACAGGAAAGTGGCGTCCATTATATTTCCTCTGGTTGCTCCTTGTCTTAACCCAATTATCTATGGGCTTCAGTCCAAAGAGATTTACAAAGTGTTAAAGAATATGTTCCAGTCCAAGATTATGTCTCTTCGATTGTAATATACTTTTTAATGTGTAAAAGTGAATAAAAAGTGTT

Function


NR:

description
olfactory receptor 5AC2-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_021618148.2 True 992 mRNA 0.45 1 34269661 34270652

Neighbor


gene id symbol gene type direction distance location
LOC110534893 LOC106603570 coding downstream 21246 34247477 ~ 34248415 (-)
LOC110534892 LOC106603428 coding downstream 35466 34233136 ~ 34234195 (-)
LOC110534914 LOC106603428 coding downstream 43772 34224948 ~ 34225889 (-)
LOC110534891 LOC106567904 coding downstream 52095 34212587 ~ 34217566 (-)
LOC110534889 NA coding downstream 84222 34184934 ~ 34185439 (-)
serpinf1 LOC106603571 coding upstream 78871 34349523 ~ 34356204 (-)
LOC110533697 LOC106603572 coding upstream 85843 34356495 ~ 34363372 (-)
c10h17orf49 cssa04h17orf49 coding upstream 172917 34443569 ~ 34459501 (-)
LOC100335039 LOC100335039 coding upstream 225140 34494606 ~ 34560547 (-)
ap4m1 ap4m1 coding upstream 250578 34521230 ~ 34528777 (-)
G881398 NA non-coding downstream 62501 34206931 ~ 34207160 (-)
G881384 NA non-coding downstream 76209 34193098 ~ 34193452 (-)
G881380 NA non-coding downstream 79533 34189907 ~ 34190128 (-)
G881340 NA non-coding downstream 119305 34150150 ~ 34150356 (-)
G881318 NA non-coding downstream 150882 34118305 ~ 34118779 (-)
G881754 NA non-coding upstream 63449 34334101 ~ 34334345 (-)
G881755 NA non-coding upstream 64416 34335068 ~ 34335426 (-)
G881757 NA non-coding upstream 65375 34336027 ~ 34336346 (-)
G881762 NA non-coding upstream 69708 34340360 ~ 34340748 (-)
G881763 NA non-coding upstream 70170 34340822 ~ 34341143 (-)
LOC110533687 NA other downstream 296349 33939072 ~ 33973312 (-)
G880994 NA other downstream 590822 33613325 ~ 33678839 (-)
LOC110533673 NA other downstream 1018140 33153970 ~ 33251521 (-)
G880807 NA other downstream 1104639 33162912 ~ 33165022 (-)
G880718 LOC106603546 other downstream 1231778 33036163 ~ 33037883 (-)
G881778 NA other upstream 142411 34413063 ~ 34417261 (-)
LOC110533714 rbmx2 other upstream 321670 34589717 ~ 34596263 (-)
LOC110534894 gpr119 other upstream 327715 34597247 ~ 34599007 (-)
LOC110533718 LOC106603592 other upstream 622327 34891059 ~ 34893957 (-)
G882578 NA other upstream 1032262 35302914 ~ 35304055 (-)

Expression



Co-expression Network