LOC110533697 (LOC106603572)


Basic Information

Item Value
gene id LOC110533697
gene name LOC106603572
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 34356495 ~ 34363372 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021618157.2
GAACATTAACTGAGCAATGAGGGGGCTGACAGTAGAGTACTGGGCACTACAGGATCCAGCTAGGGGAACACTCACCGTGCCTGTCTGACTCTCTATCTGTCTATATCCTAATCCTGTTTGCCTATATCACCTATCCCCTGACCAAACATCGGCTGGGCTAGCTGTTGGGATATGAAGCTGCATCTGCCTGTACTCTTGCTGCTCTGCCTCTGTTGGCTGGGACTGActgatgaGACTGGTACGGTAgctactgagtaccactcttgcGGGGAGCAGGTGCTCAGCCAGGAGGCCCGGTGGTCAGTAGggggtgctgtagagagactggGCAGGCAGCTACTGGACAGCCTGCAGACAGGGTCAGAGCAGCCCAACGTCATCATATCACCCCTCAGCGTGGCCCTTGCACTAGCACAGCTCACACTGGGAGCTCGTAACGAGACACAGAAGTTGCTGCTAAGTTCTCTACACGCCCACACTGTGCCCTGCTACCATGAATCCCTGGGCAGCCTGCTCCAACACCTCACCAACACCTCCCTACAGGTGGCTACACGCATGTACCTGCGcccagagtTTGAGGTGTACCAGTCCTTTGTTGCAGAATCCATGCGTAGCTACAAATCAGAGCCTGTCCCCTTGATCTCAGTGGAAGATGTCAACCAATGGGTGGAAGACACCACCAAAGGTCACATGACCAATTTCCTGACCAGTATTCCGCATGATGTGGTGCTCATGCTGATCAATGCTGTGCATTTCAAAGGTGAGTGGGAGGCTCGCTTCGACCCTCAGCTCACACAGAAGGATGTCTTCTACCTGGACAATAAGAACTTTGTCCATGTAGACATGATGCGGTCAGCCAAGTATCCACTGAGCCTGTTAGAAGATGGGGAGCTTGGGGCTCAGGTTGCACGTTTTCCATTTAAGGGAAACACCAGCTTTCTGGTAGTGATGCCGTTGCCAGGAAGAGGAAACGTGTCATCGCTGGTGGCCAAGCTGAATATCTCTGACCTGTACAGACGTCTACCTCAGGAGAGGACCATGCAGGTCCAACTGCCCAAGTTCACCCTGCAGTACCGCCAAGAGCTACAGGAGGCGCTGACCAGCATGGgtctgggCTCTTTGTTCTCTAGTCCTAATCTGTCCGGTGTCTCAGCGGTTCCTCTGCAGGTGTCCAGCATGCGTCACGCCTGCGGGGTGGAGTTGAGTGAGGAGGGGGCCGAAGCATCTGCAGCCACCTCCATCACCATCATGCGCTCTGTTCCCATCTTTTCTGTAAACTACCCCTTCCTGTTCGCCCTGGTAGACCACGCCTCCCTCGCTCCAATCTTCCTGGGCACCGTCACTAACCCAGCCCCTGATGCCAGCCCCATGCAGATCGACAGTCCCCTCGGCGATGATCCCAATGGCAACAGGACCCAAAGTGACAGTTCTCATAGCAACAGCAATGTACAGAACGATGGTCCCCATAGTAACAACAACGTACAGAGCGACAGTCCCCATAGCAGTAACAACGTACAGAGTGACCAGCCACAAAGTGAGAGAATGCAGTGTGGCGTCCCTGTCGGGGGGGAGGAGCAACAACAGCCCCTGAATGAAGTAGAGGGAAACCCCAACGCCCAAGTGGAGGGGCAAGGATCCAGTTCCTGTGCCAATCCCTCTCATACAGTTCCTTCCTAAACCAACACTGATGCCCAGCTTGCCCTAACCCATCTCTCACTGTTCTGTCCTGAGCAACACTGATGCCCAGCTTGCCCCAACCCATCTCTCaatgttctgtcctgtcctgagcAACACTGATGCCCAGCTTTCCCCAAACCATCTCTCACTGTTCTGTCCTGAGCAACACTGCCTGACCAGCTGGTCCCATATGGAGCCCAGCCCTCACATAGCAAAACCCTATCCCAATCTATTGGCTCAGTTCCCAGTCCAGAATCAACAACAGCCCCTACCCCTAGACACCTGACAACTTCTCACAGTCCCTCCCCTCCCCAGTGAATGCCCCTGATTACAACCCAATGATTTAGGAGAGACCATGGACCTGTCCCATACTAcactgtgtgtgcagattaacactcaaatgtgtttttttacacTTGGCTGTGCACTGTCTGTCTTACAGtatttgtgttttgttttgaTGTCTTACTTTTTGATGATTCCCACCTCTGGTATTGATTAAAGAAATGAAGTCTCAATGTTTTA
>XM_021618158.2
TGAACATTAACTGAGCAATGAGGGGGCTGACAGTAGAGTACTGGGCACTACAGGATCCAGCTAGGGGAACACTCACCGTGCCTGTCTGACTCTCTATCTGTCTATATCCTAATCCTGTTTGCCTATATCACCTATCCCCTGACCAAACATCGGCTGGGTTTCTTTGTTCTGTATTGCAGGCTAGCTGTTGGGATATGAAGCTGCATCTGCCTGTACTCTTGCTGCTCTGCCTCTGTTGGCTGGGACTGActgatgaGACTGGTACGGTAgctactgagtaccactcttgcGGGGAGCAGGTGCTCAGCCAGGAGGCCCGGTGGTCAGTAGggggtgctgtagagagactggGCAGGCAGCTACTGGACAGCCTGCAGACAGGGTCAGAGCAGCCCAACGTCATCATATCACCCCTCAGCGTGGCCCTTGCACTAGCACAGCTCACACTGGGAGCTCGTAACGAGACACAGAAGTTGCTGCTAAGTTCTCTACACGCCCACACTGTGCCCTGCTACCATGAATCCCTGGGCAGCCTGCTCCAACACCTCACCAACACCTCCCTACAGGTGGCTACACGCATGTACCTGCGcccagagtTTGAGGTGTACCAGTCCTTTGTTGCAGAATCCATGCGTAGCTACAAATCAGAGCCTGTCCCCTTGATCTCAGTGGAAGATGTCAACCAATGGGTGGAAGACACCACCAAAGGTCACATGACCAATTTCCTGACCAGTATTCCGCATGATGTGGTGCTCATGCTGATCAATGCTGTGCATTTCAAAGGTGAGTGGGAGGCTCGCTTCGACCCTCAGCTCACACAGAAGGATGTCTTCTACCTGGACAATAAGAACTTTGTCCATGTAGACATGATGCGGTCAGCCAAGTATCCACTGAGCCTGTTAGAAGATGGGGAGCTTGGGGCTCAGGTTGCACGTTTTCCATTTAAGGGAAACACCAGCTTTCTGGTAGTGATGCCGTTGCCAGGAAGAGGAAACGTGTCATCGCTGGTGGCCAAGCTGAATATCTCTGACCTGTACAGACGTCTACCTCAGGAGAGGACCATGCAGGTCCAACTGCCCAAGTTCACCCTGCAGTACCGCCAAGAGCTACAGGAGGCGCTGACCAGCATGGgtctgggCTCTTTGTTCTCTAGTCCTAATCTGTCCGGTGTCTCAGCGGTTCCTCTGCAGGTGTCCAGCATGCGTCACGCCTGCGGGGTGGAGTTGAGTGAGGAGGGGGCCGAAGCATCTGCAGCCACCTCCATCACCATCATGCGCTCTGTTCCCATCTTTTCTGTAAACTACCCCTTCCTGTTCGCCCTGGTAGACCACGCCTCCCTCGCTCCAATCTTCCTGGGCACCGTCACTAACCCAGCCCCTGATGCCAGCCCCATGCAGATCGACAGTCCCCTCGGCGATGATCCCAATGGCAACAGGACCCAAAGTGACAGTTCTCATAGCAACAGCAATGTACAGAACGATGGTCCCCATAGTAACAACAACGTACAGAGCGACAGTCCCCATAGCAGTAACAACGTACAGAGTGACCAGCCACAAAGTGAGAGAATGCAGTGTGGCGTCCCTGTCGGGGGGGAGGAGCAACAACAGCCCCTGAATGAAGTAGAGGGAAACCCCAACGCCCAAGTGGAGGGGCAAGGATCCAGTTCCTGTGCCAATCCCTCTCATACAGTTCCTTCCTAAACCAACACTGATGCCCAGCTTGCCCTAACCCATCTCTCACTGTTCTGTCCTGAGCAACACTGATGCCCAGCTTGCCCCAACCCATCTCTCaatgttctgtcctgtcctgagcAACACTGATGCCCAGCTTTCCCCAAACCATCTCTCACTGTTCTGTCCTGAGCAACACTGCCTGACCAGCTGGTCCCATATGGAGCCCAGCCCTCACATAGCAAAACCCTATCCCAATCTATTGGCTCAGTTCCCAGTCCAGAATCAACAACAGCCCCTACCCCTAGACACCTGACAACTTCTCACAGTCCCTCCCCTCCCCAGTGAATGCCCCTGATTACAACCCAATGATTTAGGAGAGACCATGGACCTGTCCCATACTAcactgtgtgtgcagattaacactcaaatgtgtttttttacacTTGGCTGTGCACTGTCTGTCTTACAGtatttgtgttttgttttgaTGTCTTACTTTTTGATGATTCCCACCTCTGGTATTGATTAAAGAAATGAAGTCTCAATGTTTTA

Function

NR:

description
alpha-2-antiplasmin-like isoform X1

GO:

id name namespace
GO:0005615 extracellular space cellular_component

KEGG:

id description
K03983 SERPINF2, AAP; alpha-2-antiplasmin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021618157.2 False 2202 mRNA 0.53 8 34356495 34363371
XM_021618158.2 True 2225 mRNA 0.53 8 34356495 34363372

Neighbor

gene id symbol gene type direction distance location
serpinf1 LOC106603571 coding downstream 291 34349523 ~ 34356204 (-)
LOC110533693 NA coding downstream 85843 34269661 ~ 34270652 (-)
LOC110534893 LOC106603570 coding downstream 108080 34247477 ~ 34248415 (-)
LOC110534892 LOC106603428 coding downstream 122300 34233136 ~ 34234195 (-)
LOC110534914 LOC106603428 coding downstream 130606 34224948 ~ 34225889 (-)
c10h17orf49 cssa04h17orf49 coding upstream 80197 34443569 ~ 34459501 (-)
LOC100335039 LOC100335039 coding upstream 132420 34494606 ~ 34560547 (-)
ap4m1 ap4m1 coding upstream 157858 34521230 ~ 34528777 (-)
LOC110533714 rbmx2 coding upstream 226345 34589717 ~ 34596263 (-)
LOC110534894 gpr119 coding upstream 233875 34597247 ~ 34599007 (-)
G881769 NA non-coding downstream 7970 34348258 ~ 34348525 (-)
G881763 NA non-coding downstream 15352 34340822 ~ 34341143 (-)
G881762 NA non-coding downstream 15747 34340360 ~ 34340748 (-)
G881757 NA non-coding downstream 20149 34336027 ~ 34336346 (-)
G881755 NA non-coding downstream 21069 34335068 ~ 34335426 (-)
G881774 NA non-coding upstream 16655 34380027 ~ 34380235 (-)
G881776 med31 non-coding upstream 16884 34380256 ~ 34383153 (-)
G881777 NA non-coding upstream 24749 34388121 ~ 34388350 (-)
G881781 NA non-coding upstream 28519 34391891 ~ 34394074 (-)
G881789 NA non-coding upstream 41356 34404728 ~ 34405090 (-)
LOC110533687 NA other downstream 383183 33939072 ~ 33973312 (-)
G880994 NA other downstream 677656 33613325 ~ 33678839 (-)
LOC110533673 NA other downstream 1104974 33153970 ~ 33251521 (-)
G880807 NA other downstream 1191473 33162912 ~ 33165022 (-)
G880718 LOC106603546 other downstream 1318612 33036163 ~ 33037883 (-)
G881778 NA other upstream 49691 34413063 ~ 34417261 (-)
LOC110533718 LOC106603592 other upstream 529607 34891059 ~ 34893957 (-)
G882578 NA other upstream 939542 35302914 ~ 35304055 (-)

Expression


Co-expression Network