plp (plp)


Basic Information

Item Value
gene id plp
gene name plp
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 35818219 ~ 35823669 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021617178.2
ATTGTTGGTTAGACAAAAGCGCAAGTCAGATTCATATAGGAGTGGTGGGGAATAACTTCTCATATCCTCATATCACAGTCACAAAGCCGCCAAGCCAAACCTCAATAACCCCATACTTCTCTCTGAACATGGGTTGTTATGATTGCTGTATCCGATGCCTGGGGGCAGTGCCCTACCCCTCCCTGGTTTCCACTCTGCTCTGCTTCACCGGCATGGCACTGTTCTGTGGCTGCGGGCACGAGGCACTGGCACACACCGAGGTGCTCGTCGAGACTTACTTTGTTCGTAACATACAAGACTATGTTATCCTGGCCTCGTTTATCAAGTACTTCCAGTACGTGATCTATGGCCTGGCCTCTTTCTTCTTCCTCTACTGCATCCTGCTGCTGGCCGAGGGATTCTACACCACCAGCGCTGTCAAGCAGACCTTCGGAGAGTTCCGGAGCACCAGATGTGGCCGCTGCCTTAGTCTGACGTTCATCATTGTGACATACGTCCTGGCAGTGATCTGGCTGGCGGTGTTTGCCTTCACAGCCATacccgtcttcttcttctttaataTGGCACAGACCTGCCACAACATCAACATCCTGGCTGAGACGACACCCAGCATCAACCAGCACGGCTGGATCTGCATGGATGCTCGGCAGTATGGTCTGCTGCCTTGGAATGCAATGCCAGGTAAGGCTTGTGGAATGACCTTGGCATCCATCTGCAAAACAAAAGAGtTCTTTGTCACCTATGACCTATACATCGCTGCCTTTGCTGGTGCAGGGATTGCTCTCTTGGCTCTGTTTCTGTATGTGGTAGCTACCACCTATAACTATGCAGTGCTGCGGTTCCTGGGCAGAAAAGGGCTGCGCTGTTAAAAACGGTGCCCTGTCAAGTCTTCATCCGCCCATAGACTGGGCCTGAGGAGAGCCGTTACACATCACACTACTGAACATTCATCCATCCCCTCAGACACGCCTGCAGCCTGATTCCCCTACCTACTGCTGGCTGCTTCCCTGGAGGGCTTTGCTAACTGGCACATGGTTCATCTTGACCATCTGATTTATCACTTCAACAACAGCCTAAGAGATGAATAGAACTCCTGGGCATCATAACTtcaagcccctccccctggtcATCATAACTTCGAGCCCCTCCCACCCTCCTGCTCACCAGTCTTATCCCCTCGGTTCTCAGTCCAGGAAGATGACTCTCTGATGTCTGTTGCTCCTTTTCTTTTACATTGGATGTAGCGTCTCTGGTTTTGGTTTGCAAGTGTCCCTGACATGATTGTCAGCTTGTGTTATGTGGACTCCATTCAGCCCTCTAAATCTGAGTGACTGAAAGAGATGACTGCTCTCCATGCTTATCAGAACTAAGAATTACACCCCAGTCCCCTCGCTTACTGATATCTATATAGATAGTGAACATGATCTAGCTGCTTTTGCTTTAGATTGTGAATGTAAATGAGCTGTCCGTTACTGTAACCAAAGCAAACAGCTGAATGTGCCAAAGTGCTGTACATTCAAGTGAAATGTGAGAGTCTCTCTTGTCTAAGTGTGTCAAAGGACTTATGGCATCTTTTTTTTGCACTCACTCTTGATGTATAAGTATGTGTTGTTTGTCCTTTTAAATGATTACCGTGTGGAGGGTGAAAGGAAACCCAATTCTGTGGAGGTGCTAGTTCTAAGATCAGTCGTTTTCATTCTCCACATGTATTAATGCTCTCTGCTTTTAAACCACAGGGTTGCTGTGTTCATTTTGAATTGAGCAATTAAACTTAATCAAAGCCATTTTAAACCCAA
>NM_001124701.1
GATGAAACCATTGCAGACAGAGCAGTTTTTTGGTGAAAATATCCTGCAGCTGAGCCTTTAGCATCACTGATTCATAAACTCTTTGCTTGTTGTTGAGGAGCACAAGATCGAAAGGAACAAATGTTTCCGGTCAGACAGCCTTGGCTTTGCAAAGCCCTAGGTTGTTATGATTGCTGTATCCGATGCCTGGGGGCAGTGCCCTACCCCTCCCTGGTTTCCACTCTGCTCTGCTTCACCGGCATGGCACTGTTCTGTGGCTGCGGGCACGAGGCACTGGCACACACCGAGGTGCTCGTCGAGACTTACTTTGTTCGTAACATACAAGACTATGTTATCCTGGCCTCGTTTATCAAGTACTTCCAGTACGTGATCTATGGCCTGGCCTCTTTCTTCTTCCTCTACTGCATCCTGCTGCTGGCCGAGGGATTCTACACCACCAGCGCTGTCAAGCAGACCTTCGGAGAGTTCCGGAGCACCAGATGTGGCCGCTGCCTTAGTCTGACGTTCATCATTGTGACATACGTCCTGGCAGTGATCTGGCTGGCGGTGTTTGCCTTCACAGCCATaccgtcttcttcttctttaataTGGCACAGACCTGCCACAACATCAACATCCTCTGAGACGACACCCAGCATCAACCAGCACGGCTGGATCTGCATGGATGCTCGGCAGTATGGTCTGCTGCCTTGGAATGCAATGCCAGGTAAGGCTTGTGGAATGACCTTGGCATCCATCTGCAAAACAAAAGAGtTCTTTGTCACCTATGACCTATACATCGCTGCCTTTGCTGGTGCAGGGATTGCTCTCTTGGCTCTGTTTCTGTATGTGGTAGCTACCACCTATAACTATGCAGTGCTGCGGTTCCTGGGCAGAAAAGGGCTGCGCTGTTAAAAACGGTGCCCTGTCAAGTCTTCATCCGCCCATAGACTGGGCCTGAGGAGAGCCGTTACACATCACACTACTGAACATTCATCCATCCCCTCAGACACGCCTGCAGCCTGATTCCCCTACCTACTGCTGGCTGCTTCCCTGGAGGGCTTTGCTAACTGGCACATGGTTCATCTTGACCATCTGATTTATCACTTCAACAACAGCCTAAGAGATGAATAGAACTCCTGGGCATCATAACTtcaagcccctccccctggtcATCATAACTTCGAGCCCCTCCCACCCTCCTGCTCACCAGTCTTATCCCCTCGGTTCTCAGTCCAGGAAGATGACTCTCTGATGTCTGTTGCTCCTTTTCTTTTACATTGGATGTAGCGTCTCTGGTTTTGGTTTGCAAGTGTCCCTGACATGATTGTCAGCTTGTGTTATGTGGACTCCATTCAGCCCTCTAAATCTGAGTGACTGAAAGAGATGACTGCTCTCCATGCTTATCAGAACTAAGAATTACACCCCAGTCCCCTCGCTTACTGATATCTATATAGATAGTGAACATGATCTAGCTGCTTTTGCTTTAGATTGTGAATGTAAATGAGCTGTCCGTTACTGTAACCAAAGCAAACAGCTGAATGTGCCAAAGTGCTGTACATTCAAGTGAAATGTGAGAGTCTCTCTTGTCTAAGTGTGTCAAAGGACTTATGGCATCTTTTTTTTGCACTCACTCTTGATGTATAAGTATGTGTTGTTTGTCCTTTTAAATGATTACCGTGTGGAGGGTGAAAGGAAACCCAATTCTGTGGAGGTGCTAGTTCTAAGATCAGTCGTTTTCATTCTCCACATGTATTAATGCTCTCTGCTTTTAAACCACAGGGTTGCTGTGTTCATTTTGAATTGAGCAATTAAACTTAATCAAAGCCATTTTA

Function

symbol description
plp Predicted to enable molecular adaptor activity. Involved in cilium-dependent cell motility; microtubule cytoskeleton organization; and sensory perception of sound. Located in centriole and ciliary basal body. Is expressed in epithelial cell; epithelium; scolopidial neurons; and spermatozoon. Human ortholog(s) of this gene implicated in long QT syndrome 11 and microcephalic osteodysplastic primordial dwarfism type II. Orthologous to several human genes including PCNT (pericentrin).

NR:

description
myelin proteolipid protein

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021617178.2 False 1796 mRNA 0.48 7 35818219 35823669
NM_001124701.1 True 1814 mRNA 0.48 9 35818226 35821795

Neighbor

gene id symbol gene type direction distance location
LOC110533754 LOC106603385 coding downstream 28298 35783622 ~ 35789921 (-)
LOC110533755 LOC106603386 coding downstream 34659 35779606 ~ 35783560 (-)
LOC110533749 taf1 coding downstream 41592 35716755 ~ 35776627 (-)
LOC110533752 LOC106603390 coding downstream 101703 35704848 ~ 35716516 (-)
LOC110533744 upp coding downstream 204819 35608210 ~ 35613400 (-)
LOC110533756 LOC106603382 coding upstream 1296 35824965 ~ 35857126 (-)
LOC110533758 LOC106603379 coding upstream 166876 35990545 ~ 36058365 (-)
LOC110533759 LOC106603378 coding upstream 235529 36059198 ~ 36083109 (-)
LOC110533762 LOC106603377 coding upstream 262626 36086295 ~ 36102648 (-)
ercc6l ercc6l coding upstream 281112 36104781 ~ 36117760 (-)
G883030 NA non-coding downstream 75119 35690518 ~ 35743100 (-)
G882951 rb1 non-coding downstream 255643 35559498 ~ 35562576 (-)
G882875 NA non-coding downstream 388285 35429734 ~ 35429934 (-)
G882632 NA non-coding downstream 389509 35428413 ~ 35428710 (-)
G882628 NA non-coding downstream 394394 35423597 ~ 35423825 (-)
G883112 NA non-coding upstream 47846 35871515 ~ 35871734 (-)
G883115 NA non-coding upstream 48796 35872465 ~ 35872720 (-)
G883434 NA non-coding upstream 349359 36173028 ~ 36173449 (-)
G883440 NA non-coding upstream 358307 36181976 ~ 36183040 (-)
G883733 NA non-coding upstream 514863 36338532 ~ 36338783 (-)
G882971 rb1 other downstream 219134 35598317 ~ 35599085 (-)
G882631 NA other downstream 390011 35427249 ~ 35428208 (-)
G882539 NA other downstream 496513 35320814 ~ 35321706 (-)
G882578 NA other downstream 514164 35302914 ~ 35304055 (-)
LOC110533718 LOC106603592 other downstream 924291 34891059 ~ 34893957 (-)
G883128 NA other upstream 56855 35880524 ~ 35880951 (-)
G883753 NA other upstream 566328 36389997 ~ 36390914 (-)
G883754 NA other upstream 567434 36391103 ~ 36392527 (-)
scn4bb LOC106603364 other upstream 835849 36652707 ~ 36665717 (-)
G884736 NA other upstream 1493248 37316917 ~ 37318864 (-)

Expression


Co-expression Network