XLOC_002748


Basic Information

Item Value
gene id XLOC_002748
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 22530785 ~ 22534924 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006039
aattccagAAAGTAACAACATACATACAGAATCACAGCGTCCTCTTGACATGTCTCAGTCAACAGAATCCACACATGCACATCAACACTTTCTGGACAGAAGGCAACGGTTCACATCGTggacagaaaatgaatgacaggGGCAGATGCCAAGTATAGTTTGTGTACAAACAGAGAAGCTACATTTATATACCAAACACAAACCCAGATTGCCCTCTTAGAACAGAGCCAAATGGGCCAAAACAGCACCTCAGTCATACTTGGAAACACTGGAGGGTAAAAACGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006039 True 285 lncRNA 0.43 2 22530785 22534924

Neighbor

gene id symbol gene type direction distance location
XLOC_002747 zgc:172339 coding downstream 24741 22501763 ~ 22506044 (-)
XLOC_002746 CT573337.1 coding downstream 32805 22494826 ~ 22497980 (-)
XLOC_002745 NA coding downstream 39327 22481158 ~ 22491458 (-)
XLOC_002744 BX005194.1 coding downstream 258882 22271789 ~ 22271903 (-)
XLOC_002743 fgf11b coding downstream 281341 22161585 ~ 22249444 (-)
XLOC_002749 NA coding upstream 19425 22554349 ~ 22567208 (-)
XLOC_002750 NA coding upstream 69349 22604273 ~ 22607715 (-)
XLOC_002751 AL807389.3 coding upstream 217308 22752232 ~ 22752348 (-)
XLOC_002752 pcolcea coding upstream 254395 22789319 ~ 22803854 (-)
XLOC_002753 per1a coding upstream 274791 22809715 ~ 22831611 (-)
XLOC_002732 NA non-coding downstream 686922 21646154 ~ 21843863 (-)
XLOC_002731 NA non-coding downstream 881057 21627807 ~ 21649728 (-)
XLOC_002730 BX957322.2 non-coding downstream 957328 21570196 ~ 21573457 (-)
XLOC_002761 NA non-coding upstream 978198 23513122 ~ 23519215 (-)
XLOC_002762 NA non-coding upstream 983137 23518061 ~ 23520243 (-)

Expression


Co-expression Network