ercc6l (ercc6l)


Basic Information

Item Value
gene id ercc6l
gene name ercc6l
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 36104781 ~ 36117760 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021618270.2
TCGTTTGAAATATGTGGCGGGGAGATTCGTTGGCGTTGCGCAGTCAAAGCGAAGCACAGGCGAGTCCCAATGCATCACAAATGAAATAATCCCAACAAATCGAACTGGCAAAACAATGGACAACTCAAATCACCTAATTTCGAAGATGTCGGAGAAATTGGAGAAGTCATTGTCAATGGACACTGAGGAGATGGAGACATACCAGAGGTACATCAGGGATGGAAAAGATGCTGCCAGACAAGGAAATATGTCAAAATCATTGGAACTGTTCAAGCTGGCCCATGACATCCACCCTGGTGATAAACTTTGGAGCAGGATAAAGAAACTTCAGGAGGCTATAAAAGAGATGGCACAGCAAGGCTCAGAGAGTGAGGATGAAGATTTTGTCAATGTCAACAACAGTGGTCTAATGCTTTTCAAAGAAATGTATGACAAACTGTATGATCATCAGCAAGAGGGGGTTGCTTTTTTGTATGGTCTCCACAGAGATGGTCGTCAAGGAGGAATCCTAGCTGATGACATGGGCTTAGGGAAGACAATTCAGGTCATATCGTTTCTCTCTGGTATGTATGATGCTGACTTGGTAAAGCATACCCTGCTCATCATGCCAACCTCACTCATCAAGAACTGGATCAGGGAATTTGCCAAATGGACTCCTGGAATGAGAGTCAAAGAGTTTCATGGCACAAGCAAAGTGGAACGCAACAGGAACTTGGAGAAGATTCAAAGAAGAGGTGGTGTCATCATCACTACATACCAAATGCTGATCACTAACTGGGAACTTCTCTCGTCTTACAATGGTAGAGAATTCAAATGGGATTATGTAATCCTAGATGAGGCACACAAGATCAAAACCTCCTCAACCAAGACAGCCAAAAGTGCACATGCGATTCCTGCCAGGAATCGTGTACTTCTTACAGGCACACCTGTACAGAATAACCTGAGAGAAATGTGGGCTCTTTTTGATTTTGCTTGTCAAGGGGCACTTCTTGGTACTTCTAAAACCTTCAAAACACAGTATGAAAGTCCCATCACCCGTGCAAGAGAGAAGGATGCCACCCCAGGTGAGAAAGCCCTGGGGCTCAAGATGTCGGAGAACCTCATGGCCATCATAAATCCATACTTCCTAAGGAGGACAAAGGCAGAAGTACAGAGAAAAACACAAAACTGTGTGAAAGCCTGTGAAAAGGACCTTGAAAACGAAGTCCCAagtagtagtaggggtggtggtggtggtgcagaAATGCCGAACCTCACCAGGAAGAATGATCTAATTATCTGGACGTACCTGAGCTCAGTTCAGGAGGAAATCTACAATCAGTTCTTATCCCTAGATAACATCAAGGAGCTGCTCATGACCACCAGGTCACCGTTGGCTGAACTGAATATCCTGAAGAAATTGTGTGACCACCCAAGACTTCTCTCCGCCAGGGCTGTCGCTCAGTTAGGCCTAGAAGAAGGAACAAGTGCAAACTCTCATGATGATGAAAATGAATCTGCTGCACACAGAATCGACAACATATCTGATGAAACACTAATATCAGAATCTGGAAAGATGATGTTTCTCATTGCACTTTTGGAAAGTCTTAAGGAAGAAGGCCATCGCACACTTGTTTTCTCTCAGTCAAGGAAGATGTTGGACATTCTTGAACGGGTTCTAGTGAACAAGCGTTTCAAGATTGTGAGACTTGATGGCACAGTAACACACCTCACAGAAAGAGAGCGGCGCATCCAAATGTTCCAGACCAACAAGCAATACTCAGTCTTTCTCCTAACCACCCAAGTGGGAGGAGTTGGCATCACATTGACAGCAGCAAACCGAGTAGTTATTTTTGACCCCAGCTGGAATCCAGCCACCGATGCCCAGGCCGTTGACCGGGCCTACCGCATTGGACAAACAGAGAACGTTGTCATCTATAGACTGATCACTTGTGGCACAGTGGAGGAGAAGATCTACAGACGGCAGGTGTTCAAAGACTCCTTGATCAGACAGACCACCGGGGACAAGAAAAATCCATTCCGGTACTTCAGCAAACAAGACCTGAAAGAACTCTTCACACTACAAGACACTCGATCCTCATCAACACAGCTGCAGCTGCAGTCACTGCACTCGAGACAAAGACTCACAGATCCTAAATTGGATGAACACATCGCCCACCTTCACTCCATGGAGATGTTTGGAATATCTGATCATGACCTCATGTTCTCGCATGAAGTAGCAAACAACGAAGATGACCCTGGGGATCAGGAAGCTCACAAGTACATAGAGAACAGGGTGCAGAAAGCTCAGGAGCTGATGAAGGTGGAATCTGAGTTGCAACAGCAGTTTGCTGACAGCATTGAGTCAAACACTGAGCCGGCACATCTGCGGAAACCCCCTCAACACTATACAGTGGGGTCAACTGAGAAAAAGCCAAAGAATGAAAAACCCAGCCCCTCCTATCCTAGCCATAACCACAACTTCAACTCCCCTGTGTTGGTGGATCTTACCCATTCTGGGTCTGGTGACGAGGAAGATATCCACAATCTGAGTAACAAATTCATTGATCTAGCTGTAGATGAAAGCATTGAGATTATAGAGCCCACTGTGACATTTGCGACTGAGGAACAGTTCATAAAGAGCAACCATCTTTCTCCCATAGACACGTCTCTTGAGGTGTTGTTGAATGGTGAGCCAATTTACACTTCCGCTCAAGAGATTTTGGATGTGTCATCAGAAGCAAAGGATGATATTGTTGCCGTAGGACATCTTACCTCTGAAGTTGAACAAGACAACCAGCCAAATGGCAATGGTTCCCCACAATGGCAGAACTTGTCACTTCACCAAGACTTGACAATGGACCAGAAGATCTCACCTGTCAAATCCCAGAAGAATCAAAGACTTTCTATGCTACTACAGATGTCCAACAAGAGCCTAGAAAGTCATGCAGAAACATCCTCCAAAGTTGATGAACTTGAGTCTTTTGGAGGAAATTTCAATCTACAGTTAGAGGACAGCGCTAGTGATATGTTCCCAGAAGAGGAATCCGAGTCCATTGTGGGAAATTCAGGTTTCCAGTTAGAGATGGATGTCGGCTTCAATGCAGATGACAAGCCTTCTGTGACTGGAGATGTTGAACAGAATGGAGCAGATGTTCATGTCAATTCCCCTGTTACTGAAAACTCATTCATTACTACTTTCAAGAAAAAGAAAAGAGAAGCTTTAATTTACAATAGTGAGGAGGATGACATTGACGAAGATGAGAGGCCTCATTTGATGAACAGGAAATTGGATGAAGAATTCCATGGTATTGGTTCCTCCACACCAAAATCTGTTAAATCTGGATCCAGTTCCTTTAAAACCAGGAAAAGCTTGGGAGTGAACACCTCTGTGGCCTCAAGACGTTCCTTTGTGGATTCCGTGATTGAGCATGTAGAGGACCTTGATGAGGACATGGAAGCTGAGGTTTTACAGGTGCACACTGATGATGCAAGTGAGGAAAGTGAGGTGACTGGATCTTGTGAGGTGACTGGATTTCATGAGTCTCTCATGGAAGAGGAACCCACAGGGGAAACCTTAAACACTGAGAATGAAGAGGAAAGTGAGGAAGGTGGAAGTGAGCCAATGCATGTTGAAGAATCTGaaatgggagaggaggaagaaagtTCTTTGGAGGAATCTACCGGTGATCATGAACTTGTTTCTAGTGAAAGAATGGACCAATGTGCCAGTGGAAAAGATGCCACATTACAGACTGTGGAATGTGTCAACAACAGCCGTGATTCCTCAGCTATGACTGAAGAAAAGATGTATGAAAACCATGTGGAAAATGGAAAACAATCTTTCTCTGAGGGGAAACTTGATGATGCCTTGAACTTCTTTTTGAAAGCAATTGACattaaaagtggtgatcctgaaaTTCAGTTAATGGCAATTAAATTGTACCGTCAGCtcggtgagagaaaaaaaaaaaaagtgaaatattTTTGAAAAGTGTGAACTCATTGCTGTCATCTACATGTACACACAATGTATCACTTCACTGATAGGGGTGTCTTTTTAAAGGTGTGTCTTGTAAAACTACGTTGAAACAAATGGTTAAAATAATAGGCTAGTTAGAAATGTTTTTTTGATCAATTATTTTCTTAATTGTATTTTTGCATGCTTTTGTAATGTGTATATAATTCATAAATGCAAGTAAAAAATAATCTAAAAATCTAATTTGTTTTAAAGTTTAATTGTGTAGTTTCACTGTGGAGGTTTCAATCATTACTCAGCCCATTAAATATTCAAAGGAAAATGGCATTTAGTGCTTGCAATTTGGTTTGATGTATATGTTTTGTGATGCTAACTCTTATTACTTGAGCTCTTATGTGAGCCATATATTGTATAATGATGATAATATCACACCATAAAACAGCATATTTGGTTTCCAATAAATTAAGCAATATTA
>XM_036990169.1
TCGTTTGAAATATGTGGCGGGGAGATTCGTTGGCGTTGCGCAGTCAAAGCGAAGCACAGGCGAGTCCCAATGCATCACAAATGAAATAATCCCAACAAATCGAACTGGCAAAACAATGGACAACTCAAATCACCTAATTTCGAAGATGTCGGAGAAATTGGAGAAGTACATCAGGGATGGAAAAGATGCTGCCAGACAAGGAAATATGTCAAAATCATTGGAACTGTTCAAGCTGGCCCATGACATCCACCCTGGTGATAAACTTTGGAGCAGGATAAAGAAACTTCAGGAGGCTATAAAAGAGATGGCACAGCAAGGCTCAGAGAGTGAGGATGAAGATTTTGTCAATGTCAACAACAGTGGTCTAATGCTTTTCAAAGAAATGTATGACAAACTGTATGATCATCAGCAAGAGGGGGTTGCTTTTTTGTATGGTCTCCACAGAGATGGTCGTCAAGGAGGAATCCTAGCTGATGACATGGGCTTAGGGAAGACAATTCAGGTCATATCGTTTCTCTCTGGTATGTATGATGCTGACTTGGTAAAGCATACCCTGCTCATCATGCCAACCTCACTCATCAAGAACTGGATCAGGGAATTTGCCAAATGGACTCCTGGAATGAGAGTCAAAGAGTTTCATGGCACAAGCAAAGTGGAACGCAACAGGAACTTGGAGAAGATTCAAAGAAGAGGTGGTGTCATCATCACTACATACCAAATGCTGATCACTAACTGGGAACTTCTCTCGTCTTACAATGGTAGAGAATTCAAATGGGATTATGTAATCCTAGATGAGGCACACAAGATCAAAACCTCCTCAACCAAGACAGCCAAAAGTGCACATGCGATTCCTGCCAGGAATCGTGTACTTCTTACAGGCACACCTGTACAGAATAACCTGAGAGAAATGTGGGCTCTTTTTGATTTTGCTTGTCAAGGGGCACTTCTTGGTACTTCTAAAACCTTCAAAACACAGTATGAAAGTCCCATCACCCGTGCAAGAGAGAAGGATGCCACCCCAGGTGAGAAAGCCCTGGGGCTCAAGATGTCGGAGAACCTCATGGCCATCATAAATCCATACTTCCTAAGGAGGACAAAGGCAGAAGTACAGAGAAAAACACAAAACTGTGTGAAAGCCTGTGAAAAGGACCTTGAAAACGAAGTCCCAagtagtagtaggggtggtggtggtggtgcagaAATGCCGAACCTCACCAGGAAGAATGATCTAATTATCTGGACGTACCTGAGCTCAGTTCAGGAGGAAATCTACAATCAGTTCTTATCCCTAGATAACATCAAGGAGCTGCTCATGACCACCAGGTCACCGTTGGCTGAACTGAATATCCTGAAGAAATTGTGTGACCACCCAAGACTTCTCTCCGCCAGGGCTGTCGCTCAGTTAGGCCTAGAAGAAGGAACAAGTGCAAACTCTCATGATGATGAAAATGAATCTGCTGCACACAGAATCGACAACATATCTGATGAAACACTAATATCAGAATCTGGAAAGATGATGTTTCTCATTGCACTTTTGGAAAGTCTTAAGGAAGAAGGCCATCGCACACTTGTTTTCTCTCAGTCAAGGAAGATGTTGGACATTCTTGAACGGGTTCTAGTGAACAAGCGTTTCAAGATTGTGAGACTTGATGGCACAGTAACACACCTCACAGAAAGAGAGCGGCGCATCCAAATGTTCCAGACCAACAAGCAATACTCAGTCTTTCTCCTAACCACCCAAGTGGGAGGAGTTGGCATCACATTGACAGCAGCAAACCGAGTAGTTATTTTTGACCCCAGCTGGAATCCAGCCACCGATGCCCAGGCCGTTGACCGGGCCTACCGCATTGGACAAACAGAGAACGTTGTCATCTATAGACTGATCACTTGTGGCACAGTGGAGGAGAAGATCTACAGACGGCAGGTGTTCAAAGACTCCTTGATCAGACAGACCACCGGGGACAAGAAAAATCCATTCCGGTACTTCAGCAAACAAGACCTGAAAGAACTCTTCACACTACAAGACACTCGATCCTCATCAACACAGCTGCAGCTGCAGTCACTGCACTCGAGACAAAGACTCACAGATCCTAAATTGGATGAACACATCGCCCACCTTCACTCCATGGAGATGTTTGGAATATCTGATCATGACCTCATGTTCTCGCATGAAGTAGCAAACAACGAAGATGACCCTGGGGATCAGGAAGCTCACAAGTACATAGAGAACAGGGTGCAGAAAGCTCAGGAGCTGATGAAGGTGGAATCTGAGTTGCAACAGCAGTTTGCTGACAGCATTGAGTCAAACACTGAGCCGGCACATCTGCGGAAACCCCCTCAACACTATACAGTGGGGTCAACTGAGAAAAAGCCAAAGAATGAAAAACCCAGCCCCTCCTATCCTAGCCATAACCACAACTTCAACTCCCCTGTGTTGGTGGATCTTACCCATTCTGGGTCTGGTGACGAGGAAGATATCCACAATCTGAGTAACAAATTCATTGATCTAGCTGTAGATGAAAGCATTGAGATTATAGAGCCCACTGTGACATTTGCGACTGAGGAACAGTTCATAAAGAGCAACCATCTTTCTCCCATAGACACGTCTCTTGAGGTGTTGTTGAATGGTGAGCCAATTTACACTTCCGCTCAAGAGATTTTGGATGTGTCATCAGAAGCAAAGGATGATATTGTTGCCGTAGGACATCTTACCTCTGAAGTTGAACAAGACAACCAGCCAAATGGCAATGGTTCCCCACAATGGCAGAACTTGTCACTTCACCAAGACTTGACAATGGACCAGAAGATCTCACCTGTCAAATCCCAGAAGAATCAAAGACTTTCTATGCTACTACAGATGTCCAACAAGAGCCTAGAAAGTCATGCAGAAACATCCTCCAAAGTTGATGAACTTGAGTCTTTTGGAGGAAATTTCAATCTACAGTTAGAGGACAGCGCTAGTGATATGTTCCCAGAAGAGGAATCCGAGTCCATTGTGGGAAATTCAGGTTTCCAGTTAGAGATGGATGTCGGCTTCAATGCAGATGACAAGCCTTCTGTGACTGGAGATGTTGAACAGAATGGAGCAGATGTTCATGTCAATTCCCCTGTTACTGAAAACTCATTCATTACTACTTTCAAGAAAAAGAAAAGAGAAGCTTTAATTTACAATAGTGAGGAGGATGACATTGACGAAGATGAGAGGCCTCATTTGATGAACAGGAAATTGGATGAAGAATTCCATGGTATTGGTTCCTCCACACCAAAATCTGTTAAATCTGGATCCAGTTCCTTTAAAACCAGGAAAAGCTTGGGAGTGAACACCTCTGTGGCCTCAAGACGTTCCTTTGTGGATTCCGTGATTGAGCATGTAGAGGACCTTGATGAGGACATGGAAGCTGAGGTTTTACAGGTGCACACTGATGATGCAAGTGAGGAAAGTGAGGTGACTGGATCTTGTGAGGTGACTGGATTTCATGAGTCTCTCATGGAAGAGGAACCCACAGGGGAAACCTTAAACACTGAGAATGAAGAGGAAAGTGAGGAAGGTGGAAGTGAGCCAATGCATGTTGAAGAATCTGaaatgggagaggaggaagaaagtTCTTTGGAGGAATCTACCGGTGATCATGAACTTGTTTCTAGTGAAAGAATGGACCAATGTGCCAGTGGAAAAGATGCCACATTACAGACTGTGGAATGTGTCAACAACAGCCGTGATTCCTCAGCTATGACTGAAGAAAAGATGTATGAAAACCATGTGGAAAATGGAAAACAATCTTTCTCTGAGGGGAAACTTGATGATGCCTTGAACTTCTTTTTGAAAGCAATTGACattaaaagtggtgatcctgaaaTTCAGTTAATGGCAATTAAATTGTACCGTCAGCtcggtgagagaaaaaaaaaaaaagtgaaatattTTTGAAAAGTGTGAACTCATTGCTGTCATCTACATGTACACACAATGTATCACTTCACTGATAGGGGTGTCTTTTTAAAGGTGTGTCTTGTAAAACTACGTTGAAACAAATGGTTAAAATAATAGGCTAGTTAGAAATGTTTTTTTGATCAATTATTTTCTTAATTGTATTTTTGCATGCTTTTGTAATGTGTATATAATTCATAAATGCAAGTAAAAAATAATCTAAAAATCTAATTTGTTTTAAAGTTTAATTGTGTAGTTTCACTGTGGAGGTTTCAATCATTACTCAGCCCATTAAATATTCAAAGGAAAATGGCATTTAGTGCTTGCAATTTGGTTTGATGTATATGTTTTGTGATGCTAACTCTTATTACTTGAGCTCTTATGTGAGCCATATATTGTATAATGATGATAATATCACACCATAAAACAGCATATTTGGTTTCCAATAAATTAAGCAATATTA

Function

symbol description
ercc6l Predicted to enable DNA translocase activity. Predicted to act upstream of or within cell division and intein-mediated protein splicing. Predicted to be located in kinetochore. Orthologous to human ERCC6L (ERCC excision repair 6 like, spindle assembly checkpoint helicase).

NR:

description
DNA excision repair protein ERCC-6-like isoform X2

GO: NA

KEGG:

id description
K20093 ERCC6L, PICH; DNA excision repair protein ERCC-6-like

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021618270.2 False 4433 mRNA 0.43 3 36104781 36117760
XM_036990169.1 True 4391 mRNA 0.43 2 36104781 36117760

Neighbor

gene id symbol gene type direction distance location
LOC110533762 LOC106603377 coding downstream 2133 36086295 ~ 36102648 (-)
LOC110533759 LOC106603378 coding downstream 21672 36059198 ~ 36083109 (-)
LOC110533758 LOC106603379 coding downstream 46416 35990545 ~ 36058365 (-)
LOC110533756 LOC106603382 coding downstream 247655 35824965 ~ 35857126 (-)
plp plp coding downstream 281112 35818219 ~ 35823669 (-)
LOC110533772 panx1 coding upstream 159294 36277054 ~ 36289721 (-)
epd om-i coding upstream 175553 36293313 ~ 36295517 (-)
LOC110533773 LOC106603370 coding upstream 185973 36303733 ~ 36341819 (-)
LOC110533100 LOC106567837 coding upstream 281180 36398940 ~ 36592948 (-)
LOC118966763 NA coding upstream 480612 36598367 ~ 36604502 (-)
G883115 NA non-coding downstream 232061 35872465 ~ 35872720 (-)
G883112 NA non-coding downstream 233047 35871515 ~ 35871734 (-)
G883030 NA non-coding downstream 361681 35690518 ~ 35743100 (-)
G882951 rb1 non-coding downstream 542205 35559498 ~ 35562576 (-)
G882875 NA non-coding downstream 674847 35429734 ~ 35429934 (-)
G883434 NA non-coding upstream 55268 36173028 ~ 36173449 (-)
G883440 NA non-coding upstream 64216 36181976 ~ 36183040 (-)
G883733 NA non-coding upstream 220772 36338532 ~ 36338783 (-)
G883736 NA non-coding upstream 226064 36343824 ~ 36344118 (-)
G883737 NA non-coding upstream 226465 36344225 ~ 36344469 (-)
G883128 NA other downstream 223830 35880524 ~ 35880951 (-)
G882971 rb1 other downstream 505696 35598317 ~ 35599085 (-)
G882631 NA other downstream 676573 35427249 ~ 35428208 (-)
G882539 NA other downstream 783075 35320814 ~ 35321706 (-)
G882578 NA other downstream 800726 35302914 ~ 35304055 (-)
G883753 NA other upstream 272237 36389997 ~ 36390914 (-)
G883754 NA other upstream 273343 36391103 ~ 36392527 (-)
scn4bb LOC106603364 other upstream 541758 36652707 ~ 36665717 (-)
G884736 NA other upstream 1199157 37316917 ~ 37318864 (-)
LOC110533823 LOC106603321 other upstream 1480873 37518096 ~ 37704039 (-)

Expression


Co-expression Network