ucp2a (ucp2a)


Basic Information

Item Value
gene id ucp2a
gene name ucp2a
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 36891951 ~ 36896174 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989321.1
cccagggcaGTGCCAGTTCAGCTCGAATCCGCCAACCAGCTGAGAACAGACGCGGTTGCCTTCTCGTGACGTAACAGGTTTAATGGTGGTATAAAAAAAAgctgcattttttttttctcaccgcTTTCTGCTAACTCGTCTCGAGGTTTCATCGTACGTGTTATCACAGAGGCATCAACCCAAAGGATTTGACATCGTTTTTTCCTGATTTAACTTTTCGTTATTTTATACACGaATTTGTAGTATGTTTTTTGGATACATCGTTTTTGAACGTTTTTCTATGGAAGAACAAGGCAACCAAATCATAATTGAAAGTAATTTTGACCAGAGGGACTCCTTTAGAGAATCCTGATCTCTGCCGTCACCGTCCTGGGTCACTTGCGTAAAGAATTGGGTAGAGTTCCCTTTGTCTTCACCTCATCAGTCTTCTTAAATTTTCACATTCCATTTATCTGGATAAAATGGTTGGATTCAGACCTGCTGATGTGCCCCCAACCGCTGCTGTGAAGTTTATCGGTGCTGGAACAGCGGCCTGCATTGCTGACCTATTCACCTTTCCCCTGGACACAGCCAAAGTCCGGCTACAGCGGCCCAGGAGGTGATGGTAAAGCCCTTGGAATCTGCAGGCCCTGGATGTAGCGTCATGGACACTGCCTGGACTCTCCTGCCCCGTTTTCCAGTGTCATTCCTATGCTCCCTCCCAGTGTCTGTTTAGTCTCTCCATGTCCCTTATGTTCCACACAGAtccagggagaggagaaaggtgCAGCAGCTAGTCATGGCACAGCAGTGAGGTATCGGGGCGTGTTTGGTACCATCACCACCATGGTGCGTACAGAGGGGGCCAGGAGCCTCTACAGCGGGCTGGTGGCAGGGCTCCAGAGGCAGATGAGCTTTGCCTCCATCCGTATCGGcctctatgactctgtcaagTCATTCTACACCAAAGGCTCAGACCaTGTAGGGATTGGCAGTCGCCTGCTGGCGGGCTGTACAACTGGAGCCATGGCAGTCGCATTAGCCCAACCCACAGATGTGGTGAAAGTCCGCTTCCAGGCACAGGCTAGTTCCTCTGGGCCAAACCGACGTTACCATGGTACCATGCAGgcctacaagaccatcgccaaggaAGAGGGCATGCGTGGTCTGTGGAGAGGTACTGGCCCAAACATTGCCCGCAATGCTATTGTGAACTGCACTGAGCTGGTTACATATGACCTCATCAAGGACGCTCTTCTTAAAAACACATCCCTGACTGATGACCTCCCCTGCCACTTCACTTCTGCATTCGGTGCAGGATTCTGCACCACTGTGATTGCCTCTCCCGTGGATGTGGTGAAGACGAGATATATGAACTCTGCCCTCGGCCAGTACAGCAGCACCCTCAACTGTGCTCATGCCATGGTGACCAAGGAGGGACCTCTTGCCTTCTACAAAGGGTTCATGCCCTCTTTCCTCCGACTGGGCTCGTGGAACGTGGTGATGTTCGTTACATATGAGCAGCTGAAACGTGCCATGATGGCAGCCCGCTAAAACTGTGGCACTCCTCTGTAGACCTGGCTTATTGGCTGCAGTGGATGGTGATGCGGTGTTGCTTTTATTCCATTAACTATCTTTTGTGGCCCTTGTCGTTTCCATTTTAAACCACTTTTCACTCACCTTTCACTGAAGTGTATTCCTGAAACTGAAGATAACTTTCGACAATAAAATGTATACCTAATTATGA
>NM_001124654.1
CGTCTCGAGGTTTCATCGTACGTGTTATCACAGAGGCATCAACCCAAAGGATTTGACATCGTTTTTTCCTGATTTAACTTTTCGTTATTTTATACACGaATTTGTAGTATGTTTTTTGGATACATCGTTTTTGAACGTTTTTCTATGGAAGAACAAGGCAACCAAATCATAATTGAAAGTAATTTTGACCAGAGGGACTCCTTTAGAGAATCCTGATCTCTGCCGTCACCGTCCTGGGTCACTTGCGTAAAGAATTGGGTAGAGTTCCCTTTGTCTTCACCTCATCAGTCTTCTTAAATTTTCACATTCCATTTATCTGGATAAAATGGTTGGATTCAGACCTGCTGATGTGCCCCCAACCGCTGCTGTGAAGTTTATCGGTGCTGGAACAGCGGCCTGCATTGCTGACCTATTCACCTTTCCCCTGGACACAGCCAAAGTCCGGCTACAGAtccagggagaggagaaaggtgCAGCAGCTAGTCATGGCACAGCAGTGAGGTATCGGGGCGTGTTTGGTACCATCACCACCATGGTGCGTACAGAGGGGGCCAGGAGCCTCTACAGCGGGCTGGTGGCAGGGCTCCAGAGGCAGATGAGCTTTGCCTCCATCCGTATCGGcctctatgactctgtcaagTCATTCTACACCAAAGGCTCAGACCaTGTAGGGATTGGCAGTCGCCTGCTGGCGGGCTGTACAACTGGAGCCATGGCAGTCGCATTAGCCCAACCCACAGATGTGGTGAAAGTCCGCTTCCAGGCACAGGCTAGTTCCTCTGGGCCAAACCGACGTTACCATGGTACCATGCAGgcctacaagaccatcgccaaggaAGAGGGCATGCGTGGTCTGTGGAGAGGTACTGGCCCAAACATTGCCCGCAATGCTATTGTGAACTGCACTGAGCTGGTTACATATGACCTCATCAAGGACGCTCTTCTTAAAAACACATCCCTGACTGATGACCTCCCCTGCCACTTCACTTCTGCATTCGGTGCAGGATTCTGCACCACTGTGATTGCCTCTCCCGTGGATGTGGTGAAGACGAGATATATGAACTCTGCCCTCGGCCAGTACAGCAGCACCCTCAACTGTGCTCATGCCATGGTGACCAAGGAGGGACCTCTTGCCTTCTACAAAGGGTTCATGCCCTCTTTCCTCCGACTGGGCTCGTGGAACGTGGTGATGTTCGTTACATATGAGCAGCTGAAACGTGCCATGATGGCAGCCCGCTAAAACTGTGGCACTCCTCTGTAGACCTGGCTTATTGGCTGCAGTGGATGGTGATGCGGTGTTGCTTTTATTCCATTAACTATCTTTTGTGGCCCTTGTCGTTTCCATTTTAAACCACTTTTCACTCACCTTTCACTGAAGTGTATTCCTGAAACTGAAGATAACTTTCGACAATAAAATGTATACCTAA

Function

NR:

description
uncoupling protein 2A

GO:

id name namespace
GO:0006839 mitochondrial transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15103 UCP2_3, SLC25A8_9; solute carrier family 25 (mitochondrial uncoupling protein), member 8/9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989321.1 False 1726 mRNA 0.50 8 36891951 36896174
NM_001124654.1 True 1427 mRNA 0.49 8 36891957 36896038

Neighbor

gene id symbol gene type direction distance location
LOC110533791 LOC106603351 coding downstream 15722 36855317 ~ 36876229 (-)
LOC110533789 LOC106603352 coding downstream 40740 36836419 ~ 36851211 (-)
LOC110533787 LOC106603353 coding downstream 85938 36802196 ~ 36806013 (-)
LOC110533786 LOC106603354 coding downstream 92293 36796729 ~ 36799658 (-)
LOC110533783 LOC106603358 coding downstream 106464 36780934 ~ 36785487 (-)
LOC110533793 LOC106603347 coding upstream 12970 36909144 ~ 36912477 (-)
LOC110533795 LOC106603346 coding upstream 59793 36955967 ~ 36956929 (-)
LOC110533104 LOC106603410 coding upstream 74194 36970368 ~ 36973762 (-)
LOC110533798 LOC106603343 coding upstream 182754 37078928 ~ 37089372 (-)
rtn2b rtn2 coding upstream 193393 37089567 ~ 37099554 (-)
G884398 NA non-coding downstream 112225 36756002 ~ 36779726 (-)
G884423 NA non-coding downstream 149908 36740710 ~ 36742043 (-)
G884417 NA non-coding downstream 159002 36732718 ~ 36732949 (-)
G884410 NA non-coding downstream 168410 36723296 ~ 36723541 (-)
G884409 NA non-coding downstream 169046 36722551 ~ 36722905 (-)
G884519 NA non-coding upstream 25992 36922166 ~ 36922366 (-)
G884542 NA non-coding upstream 100318 36996492 ~ 37038509 (-)
G884653 NA non-coding upstream 215977 37112151 ~ 37112932 (-)
sdhaf1 sdhaf1 non-coding upstream 223481 37119655 ~ 37123249 (-)
G884705 NA non-coding upstream 359713 37255887 ~ 37256086 (-)
scn4bb LOC106603364 other downstream 226594 36652707 ~ 36665717 (-)
G883754 NA other downstream 499424 36391103 ~ 36392527 (-)
G883753 NA other downstream 501037 36389997 ~ 36390914 (-)
G883128 NA other downstream 1011000 35880524 ~ 35880951 (-)
G882971 rb1 other downstream 1292866 35598317 ~ 35599085 (-)
G884736 NA other upstream 420743 37316917 ~ 37318864 (-)
LOC110533823 LOC106603321 other upstream 702459 37518096 ~ 37704039 (-)
G885767 NA other upstream 1342776 38238950 ~ 38240559 (-)
rpl36a LOC106568029 other upstream 2287524 39183698 ~ 39185578 (-)
G887329 NA other upstream 2321139 39217313 ~ 39217738 (-)

Expression


Co-expression Network