LOC110533799 (LOC106603238)


Basic Information

Item Value
gene id LOC110533799
gene name LOC106603238
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 37113130 ~ 37117261 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021618321.2
cacacacacttaaacaacGAATATATTTAAGTCTGTGATGGAAACATTTACGGATCAGATTGCTTCTCCACATCTCCCCCATCTCCATGGTCACTGATCATCAGATCCTCGGAAATGTGTACCCAGCGCAGGTAGGCTACCTGGAACCACAGATCAAGTCTCACCATGACGACGGGCAAAAACTATTTGAATAAATTGTGGAATCATCGGATTAATCAAGATATATAAAATCAGGTATGTTTTTTCTCTCTTTATATTTCAGATAATATATGATATTAATTATCAAAGAGCCTTATGAAcatttcatgtaaaaaaaaaatctaaattatgAGAAGAGTAGGCTTTTGTGATGTTTTTGATTTTCAGGCATAGTAAAGAGCTCTAGTGGTTCATGATGGGTTTACTTTGCACGACAGATATCAGTAAATTTATATACACATTTTGAGAAAAGATGGAAAAATGATTTGCACTTGTTGATTGGAAACAATGTCAATACCAAATGAATTGCCCACTGGTACCGATATCTTGTTCACAGACCAGTGCAGGATTCCAGAGTCTTACACAGTGACCAAACAGTCAGGAGTTCTCTTCTATCAGTGGGCACATCATCACACAGCTGACAATCTGTGAAACTGTTCATCAGATTCGGAACTCATAAGGAACGTGAATGACGACTCAGGACATTACACCACATTGAGAGAGCTCTGGATGGACCAACCATCAACGTCCTCTGGCCTTGGGGGCCAGCTGTGTGTAGGTTCTCTGTGTGGGTACCCAATTTGCTTTAGCACATTAGGGCTTGTTAagcgtgttgtgtgtgtgtgtgtgtgtgtgtgtggtagtttggtgtgtgtaatgtatgtgtAGTGAGTGATCTGAGTGGCGTTAATAAGGCGGGCTCAGACAGGCAGTGTATGTTAGTGCGGTGGTTCGTGTATCTGTGCCAGGCCAGCTGCACTCATGGCTCGTAAACGGGATGGTGGCTGCTGCCCCCTGCCCCTCAATGAGGACAATGCCCGCTTCTGCCTGCTGGCAGGGCTCATCTTGCTCTATCTGCTGTGTGGGGCAGCTGTGTTCTCCGCCCTAGAGCGCCCCTCTGAGCTCCGAGCCCGCCTCCTCTGGGACCAGCAGCTGGCCAACTTTACCCTGAGCCACCGGGTGAGCCTGGGAGCCCTGCACTCGCTGCTGCGCCAGTATGAAGAGGCCAACGGGGCCGGGATCAGAGTGGATGCTCTTAGGCCCCGCTGGGACTTCTCTGGAGCCTTCTACTTTGTCGGCACGGTGGTGTCCACCATCGGCTTTGGTATGAACACCCCAGCTACCATCCCTGGTAAGATATTCCTGATCTTCTACGGCCTCATCGGCTGTGCCGCCACCATCCTCTTCTTCAACCTCTTCCTGGAGAGGATCATCACCATGCTGGCCTACATCATGCGTTGGTGCCACGAGCGGAGGATGAGGCGCTCGGGGTTGGGGGCTGTGTCAGGGGCCGAGGAGCCCCGCAGTGAGGAGGACAGTCTGGAGGGCTGGAAGCCCTCTGTCTATTACGTGATGCTGATCCTGGGGGTGGCGTCTGTGCTGATCGCCTGCAGCGCCTCCTCTCTGTACTGCTCCATGGAGGACTGGAGCTACATGGACTCCCTGTACTTCTGCTTCGTGGCCTTCAGCACCATCGGCTTCGGGGACCTGGTGAGCAGCCAAAGGGAGCACTATGAGGCCCAGGAAGCCTATCGCCTGGGCAACTGCCTCTTCATCCTCATGGGCGTGTGCTGCATCTACTCGCTCTTCAACGTCATCTCCATCATCATCAAACAGACTCTCAACTGGATCCTGGCCCGGCTGGCTTGTCCAGGCCGACGCTGTCCCTGCTCGTGCCCTAAGAGAGGCCTCCGCAGGCGGGTCTGCTGCCCCTGCCTCCATAAAAAACACTCTGGCTTGAGGCCTCCACCTGCACGACTCCGCCAGCAGCACTTCAAACGCAACGCCGTGCAGCCCACCCCGTCCCAAGTCCCCACAGGGCGACATCGCTACACGGACGGCTCGGTGGAGACAGTGTGCGACAGCGAGACGGACGCCGGAGCGGGGGTGGACGGGGTCGCTGGGGGCCGGCGTCTCTCTGGGGAGATGATTTCGGTGAATGACTTCACAGCGTCCAATAAGGTGTCTTTGGCACTGCTGCAGAAGCAGCTGTGTGAGACGGCCCAGCAGGGCCCTAGGCAGAGCCACGTTCCTCGCCACAATGGCTTCTCTGGGGGGGTGGGTGCATTCGCCATTATGAACAACCGCCTGCAGGAGACCAGTGTGGACAGGTAGTCCCACCTGACCCCAACCAAACCTATTCACACCAACTCAGAAATAAAGCACTGTTTGTGTGGGTTATTGAAATATGACTGCAGCTTGACTGGATGCTGGATCTTCTCCTGTTATGTCTAAAAAGAACTAGCAACGTTTCATCCTCAGAATGAGCATTGTTTGTAGATCAAACAGTAGTGAAACAGAACAGTTATATGCCACGGCTGGCCATACATATTTGCCAAATTTGTTTTCAATGTAAATCATATTGAGGTCAGCTAGATTTCTAGTTGTAGACATGATTATAGCCCACAGCATATctctgttctgtctgacagcttctCAGAATGCCAGACATTCATGACAATCACTGATCTCCTATTGAGACAGAACGATCCCGTTTGGTTCTGTGGGGGAGATGCGGTGGACAGACACCTTCCATTTCAACAGCATATGTCTGGAGAGGGTTTGAGAGGCTCAAGTGATTGGCAGGAATGCAATGCTGAACGCAATCAGGCTTTGTGTGGAGTATGGAGATGTGGAGGGGGTCTGGAGGAGACCCACTGATTTATGAGAGCCTTTCAGATGTGTCCTGAGCTCCTCCACAACACAATGGATTTGCGTGGGGTGGCATCAGTGAACATAGAAATGTACCCACATTCTGTATTTGTATCCTGTCACCTAATGTCTAGGGCTCTGCTAGAGAACCTGTTGAATATGTATCACGGTTCAATTGTGTTGCGTTAATTAGATAGAAAGCCCTCAGACACACAGTATGAGAGCTGTAAAAGGAAGATAAAACCTCTTCATCTTCTGATGGCTGAGATGGAGGTCACATTAAAATGCAATGCAATCATCAAGATAACTCTGACAAATAGGATATTGAAATAAAGCACATTTAATCAAATATAGCATTTGGAAAGGTATTTATGTCAATAAATGGTGTGAGAGTGTGACTATCTCATCCAATTTTTATGGATTGACAATTTTCTGTGTTCATTTTAACAGTACCTAACTGATTAGGGCCCCTCACGCGTATGCAGGTATTTCCCTCAAGAGTCACCTTGATCATGCATACTTATCTCTTTACAACATGAACATCACGTACCATATTATCCTCACCAAGGTGTTTCATAGCACACTTTTAAACAGGAAAGTTCAAAAAGAAGAAGGCTGAACACTTTTTTATTTAGAGACAACTCCTCCTGGTGGACA

Function

NR:

description
potassium channel subfamily K member 13-like

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005267 potassium channel activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021618321.2 True 3507 mRNA 0.49 2 37113130 37117261

Neighbor

gene id symbol gene type direction distance location
rtn2b rtn2 coding downstream 13576 37089567 ~ 37099554 (-)
LOC110533798 LOC106603343 coding downstream 23758 37078928 ~ 37089372 (-)
LOC110533104 LOC106603410 coding downstream 139368 36970368 ~ 36973762 (-)
LOC110533795 LOC106603346 coding downstream 156201 36955967 ~ 36956929 (-)
LOC110533793 LOC106603347 coding downstream 200653 36909144 ~ 36912477 (-)
sdhaf1 sdhaf1 coding upstream 3945 37119655 ~ 37123249 (-)
qpctlb LOC106567815 coding upstream 10374 37127635 ~ 37134997 (-)
LOC110533803 LOC106603339 coding upstream 25645 37142906 ~ 37151223 (-)
itpkca LOC106603337 coding upstream 40401 37157662 ~ 37176800 (-)
LOC110533807 LOC106603336 coding upstream 60747 37178008 ~ 37185014 (-)
G884653 NA non-coding downstream 198 37112151 ~ 37112932 (-)
G884542 NA non-coding downstream 74621 36996492 ~ 37038509 (-)
G884519 NA non-coding downstream 190764 36922166 ~ 36922366 (-)
G884398 NA non-coding downstream 333404 36756002 ~ 36779726 (-)
G884423 NA non-coding downstream 371087 36740710 ~ 36742043 (-)
G884705 NA non-coding upstream 138626 37255887 ~ 37256086 (-)
G884719 NA non-coding upstream 176011 37293272 ~ 37293563 (-)
G884725 NA non-coding upstream 183511 37300772 ~ 37301123 (-)
G884728 NA non-coding upstream 188903 37306164 ~ 37306394 (-)
scn4bb LOC106603364 other downstream 447773 36652707 ~ 36665717 (-)
G883754 NA other downstream 720603 36391103 ~ 36392527 (-)
G883753 NA other downstream 722216 36389997 ~ 36390914 (-)
G883128 NA other downstream 1232179 35880524 ~ 35880951 (-)
G882971 rb1 other downstream 1514045 35598317 ~ 35599085 (-)
G884736 NA other upstream 199656 37316917 ~ 37318864 (-)
LOC110533823 LOC106603321 other upstream 481372 37518096 ~ 37704039 (-)
G885767 NA other upstream 1121689 38238950 ~ 38240559 (-)
rpl36a LOC106568029 other upstream 2066437 39183698 ~ 39185578 (-)
G887329 NA other upstream 2100052 39217313 ~ 39217738 (-)

Expression


Co-expression Network