qpctlb (LOC106567815)


Basic Information

Item Value
gene id qpctlb
gene name LOC106567815
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 37127635 ~ 37134997 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021618329.2
atttccaAATAAACAAGGCACATTTTCAGTCTCATTTTTCCATCAATTGATAGCCTTCTCCTGAATCATTTTCGCGTACAATTTTCACAGCAGGCGGTCGGAGCTCATGCACCAACTGCAGACACAGAACACCGCGTGTGCACTAAAAATGGGGCCATAACGAAACGACGACGATATGGCGGGGGTCAATATGCGATTAGTGCGGACGTTGATAGTTTATTATACCTCAGTGGTTGATAGATTTGATTGGACAGATCCGCCGCTGCATGTATGTCCCAACATGACTGCATGAGTGCTCCATTCAGGTAAAATAGCCTGTATCTTGTTGTTAAATTGTAGCCTATCCTGATGAAATTGTGTTAAATGATACTCATAGATGTCATAAATTGTTTCATGTTTATTTGCCCACGCTCGGCTCGAGTCTAAGCAGCCAGTGGCCTCATTAATTCAATCGGTCATGGACGTTATTCTCCATTGCCATACGCTAGCATGGAATCATAAGCACTATAACGCACATAGTTAAGAAAGGCTCTGTACCGGACTGAACTGTTGTGTGAATCTAACGGTTCTTCCAAGTTATGAGAACCACCCGGAAGCCCCGATCTTCTCCAGGCACCAAGCTGCTACTGGGACGCTGCTACCGGCTCCGGATGTCCCGAGTTCGGGTGCTTCTCGTATGCCTATGTGGGATGCTGGCAATAGCTCTGACACTTGGATTTTCTTTCTCGAGTAATGATACAAGCGATGATGATGACAGTATTCATATGGACGATAACACACAATTTCGTGTGCCAGACCTAATAAGGGACAAGTTGACCCATAACCCCCGTCGGGCCACTGTGGCCCAGATCAAGCGTCTGGTGGGCCAGGTGAATTCAGGTAGACTGTGGTACTCTCTCCTGAGGCCCATCCTGGTAGAGAGACTGCCAGGTACCAGGGGCAGCCGTAGGGTGCGTGAGCATATCTACAGCCATCTAGAGTTCCTGTCAGCGGGTTGGTCGTTGGAGGTCGACTCCTTCAACTCTGCTACCCCAAAGGGAATAATCACCTTCTCCAACCTACTGGCAGTCCTGGACCCCTCGGCCCCGCGCCGTCTGCTGCTGGCCTGCCACTACGACTCCAAGGCTATGCTCCCAGCTTCCAAAACCCCCGACGGGCCTCTCAGGAGGTTCCTAGGGGCCAGCGACGCGGCCGTCCCCTGTGCCATGATACTGGAGCTGGTGACTGCTCTGGACGTCCACCTGAAAGTGCTAAAACAACAGAAGTCACAGGTGACTTTGCAGTTGGTCTTCTTTGATGGTAATGAGGCGTTTGATCAGCCGAGCCCCTCCGACTCTCTGTACGGCTCACGTTACCTTGCTGAACAAATGTCCCGTACACCTCACCCTCCAGGAGCTGAACATACCACCCTGTTACATGCTTTGGACCTGTTTGTTCTTTTGGATCTGATTGGTGCCCCTGACCCTAtgtttgtcaaccactttgacgACACTGTTCGCTGGTTTGATGAGCTGATATATGCAGAGAGGAGGCTCCATAAGCTGGGTCTGCTGTCCTCCCACCCCAGAGAGGTGAGCTACTTCAGGAAGGACATAAACCTGGGCCCTGTGGAGGACGACCATGTGCCATTCCTCCAGCAGGGGGTTCCAGTCCTACACATGATCACAACGCCCTTCCCCTCCTTTATGCACACTCTGGAGGACACAGCGGAACACATCCATTCTCAGACTATCGAGAACCTCACCAAGGTGCTAGTGGTGTTCCTTGCTGAATACATAGGACTCTGACTGACGTTTCCTCCCTTTACTGTTGCTCATAGACATGTATCCTTTAGACTTTATGCCACAATCACCCAGCCGCATTTTAAAATACCAGCCACTCTCCCACATAATCAATTTACAATCATCAAAGTCCTATCATACCATGCCTTTTCTCTACATCACCTATATCTCTCGTTCTAGAATCTATACCCTAGTagtcttgttgttgttttttttaacccATTCTGGAGCCATACTAGAAAACGGTTGAAATTAGGATTGTGATTATAGAGGCCTTTTATATACCCTGTCCCTCTCATTCCCATAATCCATGTGGAACTCAGACTTATGCAAAAACAGAATGATGAACTTGATTAGGTGCCTTTTCTCAATACGTTCAGTAAATGAGGTTGTGAACACTAGAGTATATAGTGTTTCCCAATGAGGGAAGTTCAAGCTAGATCATGTggataaaaaatattaaaatgctAAATAAAGAGGTGATAtgcagacattactgtacatATTTGTTCCCCAAAAATCACTTATATGTTTAGGACAGACAGTCCAGTAATAATATAGCAATAAATATGTGCTTTGGGAAGTGCTAGATTATATGGGATATAATTGTGTAttaacagtgccttcagaaagtactcacaccccttgactttattcacattttgttgtgttacagcctgaatttaaaatggattcaatttagatGTTTTTTGTTGCCACTAGCCTAcctacaataccccataatgtcaaagtggaattcgattttttgaaaatgttgcaaatgaattacaaatgaaaagctgaaatatcttgagtcaataactattcaacccttTTATTATGGCAAGCATAAATACGTCGCATGGacacactctgtgtgcaataatagtgttttacaTGATTGTTGAATGACTACCTGATATCTGtgtcccacacatacaattatctgtaaggtccctcagtcaagcagtgaatttcaaacacagattcaaccacaaagacagggggttttccaatgcctcacaaagaagagcacctattgA
>XM_036990202.1
atttccaAATAAACAAGGCACATTTTCAGTCTCATTTTTCCATCAATTGATAGCCTTCTCCTGAATCATTTTCGCGTACAATTTTCACAGCAGGCGGTCGGAGCTCATGCACCAACTGCAGACACAGAACACCGCGTGTGCACTAAAAATGGGGCCATAACGAAACGACGACGATATGGCGGGGGTCAATATGCGATTAGTGCGGACGTTGATAGTTTATTATACCTCAGTGGTTGATAGATTTGATTGGACAGATCCGCCGCTGCATGTATGTCCCAACATGACTGCATGAGTGCTCCATTCAGTTATGAGAACCACCCGGAAGCCCCGATCTTCTCCAGGCACCAAGCTGCTACTGGGACGCTGCTACCGGCTCCGGATGTCCCGAGTTCGGGTGCTTCTCGTATGCCTATGTGGGATGCTGGCAATAGCTCTGACACTTGGATTTTCTTTCTCGAGTAATGATACAAGCGATGATGATGACAGTATTCATATGGACGATAACACACAATTTCGTGTGCCAGACCTAATAAGGGACAAGTTGACCCATAACCCCCGTCGGGCCACTGTGGCCCAGATCAAGCGTCTGGTGGGCCAGGTGAATTCAGGTAGACTGTGGTACTCTCTCCTGAGGCCCATCCTGGTAGAGAGACTGCCAGGTACCAGGGGCAGCCGTAGGGTGCGTGAGCATATCTACAGCCATCTAGAGTTCCTGTCAGCGGGTTGGTCGTTGGAGGTCGACTCCTTCAACTCTGCTACCCCAAAGGGAATAATCACCTTCTCCAACCTACTGGCAGTCCTGGACCCCTCGGCCCCGCGCCGTCTGCTGCTGGCCTGCCACTACGACTCCAAGGCTATGCTCCCAGCTTCCAAAACCCCCGACGGGCCTCTCAGGAGGTTCCTAGGGGCCAGCGACGCGGCCGTCCCCTGTGCCATGATACTGGAGCTGGTGACTGCTCTGGACGTCCACCTGAAAGTGCTAAAACAACAGAAGTCACAGGTGACTTTGCAGTTGGTCTTCTTTGATGGTAATGAGGCGTTTGATCAGCCGAGCCCCTCCGACTCTCTGTACGGCTCACGTTACCTTGCTGAACAAATGTCCCGTACACCTCACCCTCCAGGAGCTGAACATACCACCCTGTTACATGCTTTGGACCTGTTTGTTCTTTTGGATCTGATTGGTGCCCCTGACCCTAtgtttgtcaaccactttgacgACACTGTTCGCTGGTTTGATGAGCTGATATATGCAGAGAGGAGGCTCCATAAGCTGGGTCTGCTGTCCTCCCACCCCAGAGAGGTGAGCTACTTCAGGAAGGACATAAACCTGGGCCCTGTGGAGGACGACCATGTGCCATTCCTCCAGCAGGGGGTTCCAGTCCTACACATGATCACAACGCCCTTCCCCTCCTTTATGCACACTCTGGAGGACACAGCGGAACACATCCATTCTCAGACTATCGAGAACCTCACCAAGGTGCTAGTGGTGTTCCTTGCTGAATACATAGGACTCTGACTGACGTTTCCTCCCTTTACTGTTGCTCATAGACATGTATCCTTTAGACTTTATGCCACAATCACCCAGCCGCATTTTAAAATACCAGCCACTCTCCCACATAATCAATTTACAATCATCAAAGTCCTATCATACCATGCCTTTTCTCTACATCACCTATATCTCTCGTTCTAGAATCTATACCCTAGTagtcttgttgttgttttttttaacccATTCTGGAGCCATACTAGAAAACGGTTGAAATTAGGATTGTGATTATAGAGGCCTTTTATATACCCTGTCCCTCTCATTCCCATAATCCATGTGGAACTCAGACTTATGCAAAAACAGAATGATGAACTTGATTAGGTGCCTTTTCTCAATACGTTCAGTAAATGAGGTTGTGAACACTAGAGTATATAGTGTTTCCCAATGAGGGAAGTTCAAGCTAGATCATGTggataaaaaatattaaaatgctAAATAAAGAGGTGATAtgcagacattactgtacatATTTGTTCCCCAAAAATCACTTATATGTTTAGGACAGACAGTCCAGTAATAATATAGCAATAAATATGTGCTTTGGGAAGTGCTAGATTATATGGGATATAATTGTGTAttaacagtgccttcagaaagtactcacaccccttgactttattcacattttgttgtgttacagcctgaatttaaaatggattcaatttagatGTTTTTTGTTGCCACTAGCCTAcctacaataccccataatgtcaaagtggaattcgattttttgaaaatgttgcaaatgaattacaaatgaaaagctgaaatatcttgagtcaataactattcaacccttTTATTATGGCAAGCATAAATACGTCGCATGGacacactctgtgtgcaataatagtgttttacaTGATTGTTGAATGACTACCTGATATCTGtgtcccacacatacaattatctgtaaggtccctcagtcaagcagtgaatttcaaacacagattcaaccacaaagacagggggttttccaatgcctcacaaagaagagcacctattgA

Function

NR:

description
glutaminyl-peptide cyclotransferase-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0008233 peptidase activity molecular_function

KEGG:

id description
K00683 QPCT; glutaminyl-peptide cyclotransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021618329.2 False 2824 mRNA 0.45 7 37127635 37134997
XM_036990202.1 True 2553 mRNA 0.46 8 37127635 37134997

Neighbor

gene id symbol gene type direction distance location
sdhaf1 sdhaf1 coding downstream 4386 37119655 ~ 37123249 (-)
LOC110533799 LOC106603238 coding downstream 10374 37113130 ~ 37117261 (-)
rtn2b rtn2 coding downstream 28081 37089567 ~ 37099554 (-)
LOC110533798 LOC106603343 coding downstream 38263 37078928 ~ 37089372 (-)
LOC110533104 LOC106603410 coding downstream 153873 36970368 ~ 36973762 (-)
LOC110533803 LOC106603339 coding upstream 7909 37142906 ~ 37151223 (-)
itpkca LOC106603337 coding upstream 22665 37157662 ~ 37176800 (-)
LOC110533807 LOC106603336 coding upstream 43011 37178008 ~ 37185014 (-)
LOC110533808 LOC106603409 coding upstream 58116 37193113 ~ 37195456 (-)
LOC110533809 LOC106603335 coding upstream 67097 37202094 ~ 37248453 (-)
G884653 NA non-coding downstream 14703 37112151 ~ 37112932 (-)
G884542 NA non-coding downstream 89126 36996492 ~ 37038509 (-)
G884519 NA non-coding downstream 205269 36922166 ~ 36922366 (-)
G884398 NA non-coding downstream 347909 36756002 ~ 36779726 (-)
G884705 NA non-coding upstream 120890 37255887 ~ 37256086 (-)
G884719 NA non-coding upstream 158275 37293272 ~ 37293563 (-)
G884725 NA non-coding upstream 165775 37300772 ~ 37301123 (-)
G884728 NA non-coding upstream 171167 37306164 ~ 37306394 (-)
G884735 NA non-coding upstream 184802 37319799 ~ 37320543 (-)
scn4bb LOC106603364 other downstream 462278 36652707 ~ 36665717 (-)
G883754 NA other downstream 735108 36391103 ~ 36392527 (-)
G883753 NA other downstream 736721 36389997 ~ 36390914 (-)
G883128 NA other downstream 1246684 35880524 ~ 35880951 (-)
G882971 rb1 other downstream 1528550 35598317 ~ 35599085 (-)
G884736 NA other upstream 181920 37316917 ~ 37318864 (-)
LOC110533823 LOC106603321 other upstream 463636 37518096 ~ 37704039 (-)
G885767 NA other upstream 1103953 38238950 ~ 38240559 (-)
rpl36a LOC106568029 other upstream 2048701 39183698 ~ 39185578 (-)
G887329 NA other upstream 2082316 39217313 ~ 39217738 (-)

Expression


Co-expression Network