Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110533810 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 37243492 ~ 37244284 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transport protein Sec61 subunit beta |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110533810 | True | 793 | mRNA | 0.51 | 1 | 37243492 | 37244284 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533808 | LOC106603409 | coding | downstream | 48036 | 37193113 ~ 37195456 (-) |
| LOC110533807 | LOC106603336 | coding | downstream | 58478 | 37178008 ~ 37185014 (-) |
| itpkca | LOC106603337 | coding | downstream | 66692 | 37157662 ~ 37176800 (-) |
| LOC110533803 | LOC106603339 | coding | downstream | 92269 | 37142906 ~ 37151223 (-) |
| qpctlb | LOC106567815 | coding | downstream | 108495 | 37127635 ~ 37134997 (-) |
| chmp1b | LOC106603331 | coding | upstream | 104188 | 37348472 ~ 37351594 (-) |
| LOC110533816 | LOC106603328 | coding | upstream | 117905 | 37362189 ~ 37395821 (-) |
| LOC110533817 | LOC105026967 | coding | upstream | 155511 | 37399405 ~ 37402750 (-) |
| LOC110533823 | LOC106603321 | coding | upstream | 273812 | 37518096 ~ 37704039 (-) |
| LOC110533824 | LOC106603320 | coding | upstream | 599250 | 37843534 ~ 37867857 (-) |
| sdhaf1 | sdhaf1 | non-coding | downstream | 120815 | 37119655 ~ 37123249 (-) |
| G884653 | NA | non-coding | downstream | 130560 | 37112151 ~ 37112932 (-) |
| G884542 | NA | non-coding | downstream | 204983 | 36996492 ~ 37038509 (-) |
| G884519 | NA | non-coding | downstream | 321126 | 36922166 ~ 36922366 (-) |
| G884398 | NA | non-coding | downstream | 463766 | 36756002 ~ 36779726 (-) |
| G884705 | NA | non-coding | upstream | 11603 | 37255887 ~ 37256086 (-) |
| G884719 | NA | non-coding | upstream | 48988 | 37293272 ~ 37293563 (-) |
| G884725 | NA | non-coding | upstream | 56488 | 37300772 ~ 37301123 (-) |
| G884728 | NA | non-coding | upstream | 61880 | 37306164 ~ 37306394 (-) |
| G884735 | NA | non-coding | upstream | 75515 | 37319799 ~ 37320543 (-) |
| scn4bb | LOC106603364 | other | downstream | 578135 | 36652707 ~ 36665717 (-) |
| G883754 | NA | other | downstream | 850965 | 36391103 ~ 36392527 (-) |
| G883753 | NA | other | downstream | 852578 | 36389997 ~ 36390914 (-) |
| G883128 | NA | other | downstream | 1362541 | 35880524 ~ 35880951 (-) |
| G882971 | rb1 | other | downstream | 1644407 | 35598317 ~ 35599085 (-) |
| G884736 | NA | other | upstream | 72633 | 37316917 ~ 37318864 (-) |
| G885767 | NA | other | upstream | 994666 | 38238950 ~ 38240559 (-) |
| rpl36a | LOC106568029 | other | upstream | 1939414 | 39183698 ~ 39185578 (-) |
| G887329 | NA | other | upstream | 1973029 | 39217313 ~ 39217738 (-) |
