amer1 (LOC106603317)


Basic Information

Item Value
gene id amer1
gene name LOC106603317
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 37939057 ~ 37943052 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021618365.2
GGACACACCCCGCTCTCACTACAACTACCAGAATTCAATGCGTACATTAACAAGAGGCTCAAGACTGTTTGTGTTGCACGACAGAATAAAGTGATTCGGATTTATTCTTTGTAATTCTGGCGTGTAGAAGCCCAACAAGATTGTTGCCATGGAGCACTGTGACGGAAATGAGCCAGCAAGTGATACAAAGCATTTGTCTGCTGGCTGTGAGCAGACGGCCATGGGTGACCAGGATTCACAGACTGAGGTGAAGCCTCCATCTGACATTTCTGACGCTGTACCCCTTGAGCATCAGCCATCAGGGAAACTGAGGAGGACTGCCTTAAGATTCTTTGGAGGACGCAAAAGCATCTGTGTTTTACCAAACTTCTTTGGGGGAAggaacaaaaatctaaacaagTGGTCCTCTAAGAAGGGAGTCAGCAAGAGTAAAACTCATGATGGACTTAGCAAAGCAGACTGGGAGGACAGTCTGGGAATTGGATATGTCCCAGCAGGATATTTTGAGTACCACAACCAGAAAGATACTACTGGAAAGGCTTGTAGGGAATTTGGTCACCCTACTGGTGATCAGAAGTCATTCTCTCTTCCCCGGCAGAAAAAGGGTTTGCGAGAACTTTTTAACAGCATCAGGCGTTGTAGAAAGAATAGAAATTGTGATTTTGAAAAAAATGAAATGGTTGAGAATTCTCATGTCTGCAACAAAGAGGTGCCTATTGCCCAGACTATCATTGACCAAAATGACATGGAGTGCCTGGGCAGTTTGTCTGAATCCAATGTGCCTGTTTTGGCAAACGTTGACGATTGTTTGACAATTGCTCCTGAATGTATTAATGTTGATGTCATAGTGTCTGAGAAAGACCTGGTGAAACAAGGGAGTCTGGATTCTCTGATAGGGGAACTGAAGAAAGGTGAGGATATGGTAGAGACACTCCATATAAACACAGAACCAGATTCTTTCCCGAAGACTAACATAGAGTCTATTGTGAACGTCCAGCTGCCTACTGGCTCATCTCAGATGAGCTTGATGTTTGGTGATGTGGCCTCTCTAAAGAGTTTTGACTCGCTCACTGGCTGTGGTGACATAATAGCTGATCAAGACGACGACAGTATTGCAGATTCTCAGGGCTCAGTCTCAGCGGAAAGGAGTCGAAATGCAGGCAAACGGAGTTCCTGTTATGTTACGTACCAGGGTGGAGGAGAAGAAATGGCCACCCCTGTTAAGGTGGACGGGGATTATCTCCACAACCTCTGGGAAAATGAGGTTGCAGAGGACGCTTGCTATACCCACAGCCACGAAGAAGACTTTCTAGAGCACAGTGAAAGTCCTAGGATGACACCTGAAGAGCCATCTAGCTCCTATACCATGGACATCAGCATCAACAGCAATGGTGCTCTTGGAGTTACAGAGACCACCCTTACATCTTCGGATGTGATGACCCCACAGAGTGAAAATCAAGTGTCAGTTCCTAACAGCGATGAGGGTTACTATGACTCTACCACCCCAGGACAAGATGAAGACGGACGTGACAAAGTTGACAGGATCAGGACCGATAGACTACCAAGGGACAGTTATAGTGGCGATGCACTGTATGAGCTTTTTGAGCCTGATGACAGTCTTATCAGTCCACCTTTTGAAAAAGCTAAGCTGCCCGTCTCTGATCCACTTGAGTTTTTAGACATGTCAGCTCAGTGTGGTGGTGAAGATGTAAATGCTGTGTTCGCTCCTGAAACGGGTCTAATTGAAGAGGACAGGCTAACTGGGAATAGGGAGAAAATGCTTGGCAACCCTAAATTGTCAGATGCCGTTTTTGGCACCTTTACCTCAACATGTCAATCACAAGAAATTGACTATGAGCAAAACAAGCCACAGTCCCCACGGTTAAGAGGAAATCATGATCTATCTAAAACAAAGAATGACTTGGAGGATGACCAGACAGTTTGCTTCTCCCAAGCTCTAGTGGACTTCACAAAACAATCACATGTTTATAGTAATTCAACTGAAAGCATGGGAGGCTCTGAGTCAAACTTTGCCCAAAACATGCAAGCCCTCCCAGCCATTGTCACATTTGATGTCGTGGACATGGATAACGAGGGGGAATGTGACCAGCAGATGGATATGGTAATGGAGGAGGAATACATCACGTCGCCTTATGAAGTGTTTGAAGAAAGCTACCTGCAAAAGGATGCGTTTGCTGAATGTGACTTACGTATGTTTGACCTCCTTGAACAGAGTCTCAATAATACTTGGGGAATTGCCAGCCTGCCACGTCACCTTAGCCTTACACAAGTCAATCGGTCGAGTCCACTGGCTCCTCTGCTGAGTCCTTTGGCCTTAAATAGGAGGAGTAGATCCCTGGACACGGAGAGCTTGGAGTTAGAGATGACTGACATGTATTTAGGGAGTGGGGCAGCACTAGCGTCTTGCCCTAGAACTGAAAGGGACTCGAAGAGAGTGTCCTCGCTTCACCGCAAAAATAATGGATACATTTCCACTTCAGAAAACCGGGATAATAGACAGATCATGTTTCCGTCATGGCAGCCAGAGACTGAGGGGACTGTAACGCACCCACAAGCAGATGGGAAAAGAACAGAGCAGACGTACAGTCTCTATCAAACTCAAAACAGACGAATGGTATCATTCAGTCAGCCTGTCAGTCGAGTCCCAAACTGTAAATCTCAACAGATCTCAGCTAGCAAAATGACTGACAGAGTATCCTGTAATTATGTCTCTCAGATTACAGGACCGTTACATAGGCCATCTCATCTTCCTTTGCAATCAGAATCCTGTCGGCCCCATGCCCCCTATGGGAGATCAGTTAAGGCATCAGATGGTGGTGGTGAGGCGCTTTTTTACACATCGACCGTTAGCTCTCATCCTTAAAATCAACATAATAACATGCCTCAACCTTGGTTGTGAGTCTGGCAGTTCTGTAAGCAGGGCTCTAAACTGTAAGCAGGGCTCTAAACTAACTTTAAAAATGTAGGAACACCAGAAATGTGATTTTTAAAATTGGTTAAGATACAGTATAGCCTAGCTACTTCTAAAGCACACGTTGTGCCCTAGAAACGAATATGAAACCCtgtaaacacttttttttattattaaaagcAAAAATGTT
>XM_021618364.2
TGGACCCCAGGACACACCCCGCTCTCACTACAACTACCAGAATTCAATGCGTACATTAACAAGAGGCTCAAGACTGTTTGTGTTGCACGACAGAATAAAGTGATTCGGATTTATTCTTTGTAATTCTGGCGTGTAGAAGCCCAACAAGAAAAATGGAAGCAAATGGTTTTGGAAGATTGATTGCCAGCAGTCTTTGCACCTGATGGTGATACCATCATGCTCATATCTGTTCACTTCACCTTCCTGTAGATTGTTGCCATGGAGCACTGTGACGGAAATGAGCCAGCAAGTGATACAAAGCATTTGTCTGCTGGCTGTGAGCAGACGGCCATGGGTGACCAGGATTCACAGACTGAGGTGAAGCCTCCATCTGACATTTCTGACGCTGTACCCCTTGAGCATCAGCCATCAGGGAAACTGAGGAGGACTGCCTTAAGATTCTTTGGAGGACGCAAAAGCATCTGTGTTTTACCAAACTTCTTTGGGGGAAggaacaaaaatctaaacaagTGGTCCTCTAAGAAGGGAGTCAGCAAGAGTAAAACTCATGATGGACTTAGCAAAGCAGACTGGGAGGACAGTCTGGGAATTGGATATGTCCCAGCAGGATATTTTGAGTACCACAACCAGAAAGATACTACTGGAAAGGCTTGTAGGGAATTTGGTCACCCTACTGGTGATCAGAAGTCATTCTCTCTTCCCCGGCAGAAAAAGGGTTTGCGAGAACTTTTTAACAGCATCAGGCGTTGTAGAAAGAATAGAAATTGTGATTTTGAAAAAAATGAAATGGTTGAGAATTCTCATGTCTGCAACAAAGAGGTGCCTATTGCCCAGACTATCATTGACCAAAATGACATGGAGTGCCTGGGCAGTTTGTCTGAATCCAATGTGCCTGTTTTGGCAAACGTTGACGATTGTTTGACAATTGCTCCTGAATGTATTAATGTTGATGTCATAGTGTCTGAGAAAGACCTGGTGAAACAAGGGAGTCTGGATTCTCTGATAGGGGAACTGAAGAAAGGTGAGGATATGGTAGAGACACTCCATATAAACACAGAACCAGATTCTTTCCCGAAGACTAACATAGAGTCTATTGTGAACGTCCAGCTGCCTACTGGCTCATCTCAGATGAGCTTGATGTTTGGTGATGTGGCCTCTCTAAAGAGTTTTGACTCGCTCACTGGCTGTGGTGACATAATAGCTGATCAAGACGACGACAGTATTGCAGATTCTCAGGGCTCAGTCTCAGCGGAAAGGAGTCGAAATGCAGGCAAACGGAGTTCCTGTTATGTTACGTACCAGGGTGGAGGAGAAGAAATGGCCACCCCTGTTAAGGTGGACGGGGATTATCTCCACAACCTCTGGGAAAATGAGGTTGCAGAGGACGCTTGCTATACCCACAGCCACGAAGAAGACTTTCTAGAGCACAGTGAAAGTCCTAGGATGACACCTGAAGAGCCATCTAGCTCCTATACCATGGACATCAGCATCAACAGCAATGGTGCTCTTGGAGTTACAGAGACCACCCTTACATCTTCGGATGTGATGACCCCACAGAGTGAAAATCAAGTGTCAGTTCCTAACAGCGATGAGGGTTACTATGACTCTACCACCCCAGGACAAGATGAAGACGGACGTGACAAAGTTGACAGGATCAGGACCGATAGACTACCAAGGGACAGTTATAGTGGCGATGCACTGTATGAGCTTTTTGAGCCTGATGACAGTCTTATCAGTCCACCTTTTGAAAAAGCTAAGCTGCCCGTCTCTGATCCACTTGAGTTTTTAGACATGTCAGCTCAGTGTGGTGGTGAAGATGTAAATGCTGTGTTCGCTCCTGAAACGGGTCTAATTGAAGAGGACAGGCTAACTGGGAATAGGGAGAAAATGCTTGGCAACCCTAAATTGTCAGATGCCGTTTTTGGCACCTTTACCTCAACATGTCAATCACAAGAAATTGACTATGAGCAAAACAAGCCACAGTCCCCACGGTTAAGAGGAAATCATGATCTATCTAAAACAAAGAATGACTTGGAGGATGACCAGACAGTTTGCTTCTCCCAAGCTCTAGTGGACTTCACAAAACAATCACATGTTTATAGTAATTCAACTGAAAGCATGGGAGGCTCTGAGTCAAACTTTGCCCAAAACATGCAAGCCCTCCCAGCCATTGTCACATTTGATGTCGTGGACATGGATAACGAGGGGGAATGTGACCAGCAGATGGATATGGTAATGGAGGAGGAATACATCACGTCGCCTTATGAAGTGTTTGAAGAAAGCTACCTGCAAAAGGATGCGTTTGCTGAATGTGACTTACGTATGTTTGACCTCCTTGAACAGAGTCTCAATAATACTTGGGGAATTGCCAGCCTGCCACGTCACCTTAGCCTTACACAAGTCAATCGGTCGAGTCCACTGGCTCCTCTGCTGAGTCCTTTGGCCTTAAATAGGAGGAGTAGATCCCTGGACACGGAGAGCTTGGAGTTAGAGATGACTGACATGTATTTAGGGAGTGGGGCAGCACTAGCGTCTTGCCCTAGAACTGAAAGGGACTCGAAGAGAGTGTCCTCGCTTCACCGCAAAAATAATGGATACATTTCCACTTCAGAAAACCGGGATAATAGACAGATCATGTTTCCGTCATGGCAGCCAGAGACTGAGGGGACTGTAACGCACCCACAAGCAGATGGGAAAAGAACAGAGCAGACGTACAGTCTCTATCAAACTCAAAACAGACGAATGGTATCATTCAGTCAGCCTGTCAGTCGAGTCCCAAACTGTAAATCTCAACAGATCTCAGCTAGCAAAATGACTGACAGAGTATCCTGTAATTATGTCTCTCAGATTACAGGACCGTTACATAGGCCATCTCATCTTCCTTTGCAATCAGAATCCTGTCGGCCCCATGCCCCCTATGGGAGATCAGTTAAGGCATCAGATGGTGGTGGTGAGGCGCTTTTTTACACATCGACCGTTAGCTCTCATCCTTAAAATCAACATAATAACATGCCTCAACCTTGGTTGTGAGTCTGGCAGTTCTGTAAGCAGGGCTCTAAACTGTAAGCAGGGCTCTAAACTAACTTTAAAAATGTAGGAACACCAGAAATGTGATTTTTAAAATTGGTTAAGATACAGTATAGCCTAGCTACTTCTAAAGCACACGTTGTGCCCTAGAAACGAATATGAAACCCtgtaaacacttttttttattattaaaagcAAAAATGTT

Function

NR:

description
APC membrane recruitment protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021618365.2 False 3122 mRNA 0.45 2 37939057 37943043
XM_021618364.2 True 3232 mRNA 0.45 2 37939057 37943052

Neighbor

gene id symbol gene type direction distance location
LOC110533826 LOC106603319 coding downstream 13005 37899074 ~ 37926052 (-)
LOC110533824 LOC106603320 coding downstream 71200 37843534 ~ 37867857 (-)
LOC110533823 LOC106603321 coding downstream 235018 37518096 ~ 37704039 (-)
LOC110533817 LOC105026967 coding downstream 536307 37399405 ~ 37402750 (-)
LOC110533816 LOC106603328 coding downstream 543236 37362189 ~ 37395821 (-)
asb12a LOC106603316 coding upstream 2427 37945479 ~ 37947880 (-)
mtmr8 LOC106603315 coding upstream 15355 37958407 ~ 37965806 (-)
arhgap20b LOC106603313 coding upstream 122754 38065806 ~ 38112816 (-)
LOC110533836 LOC106603311 coding upstream 184374 38127426 ~ 38135731 (-)
LOC110533838 LOC106603309 coding upstream 301964 38245016 ~ 38280006 (-)
G885454 NA non-coding downstream 118862 37819902 ~ 37820195 (-)
G885452 NA non-coding downstream 120934 37817890 ~ 37818123 (-)
G885451 NA non-coding downstream 122912 37815901 ~ 37816145 (-)
G885253 NA non-coding downstream 141041 37797680 ~ 37798016 (-)
G885245 NA non-coding downstream 147446 37791372 ~ 37791611 (-)
G885511 NA non-coding upstream 25759 37968811 ~ 37969025 (-)
G885515 NA non-coding upstream 29036 37972088 ~ 37972315 (-)
G885526 NA non-coding upstream 48180 37991232 ~ 37992645 (-)
G885532 NA non-coding upstream 57544 38000596 ~ 38000908 (-)
G885533 NA non-coding upstream 58089 38001141 ~ 38001341 (-)
G884736 NA other downstream 620193 37316917 ~ 37318864 (-)
scn4bb LOC106603364 other downstream 1273700 36652707 ~ 36665717 (-)
G883754 NA other downstream 1546530 36391103 ~ 36392527 (-)
G883753 NA other downstream 1548143 36389997 ~ 36390914 (-)
G885767 NA other upstream 295898 38238950 ~ 38240559 (-)
rpl36a LOC106568029 other upstream 1240646 39183698 ~ 39185578 (-)
G887329 NA other upstream 1274261 39217313 ~ 39217738 (-)
ksr1a LOC106603285 other upstream 1911914 39843126 ~ 39893728 (-)
LOC110533878 LOC106603271 other upstream 2553662 40496714 ~ 40547393 (-)

Expression


Co-expression Network