mtmr8 (LOC106603315)


Basic Information

Item Value
gene id mtmr8
gene name LOC106603315
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 37958407 ~ 37965806 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021618368.2
ACACTACTAAGTAATGCATGGTAGGCATTTCTTTCCTGTGCAAATGGTCCTACTGTAGCACAAATGACACATGGCTACATGAATTTGAAAACTGCTACACTGTCAAATTTGACTAACTTTGTAACATTTCGCTTGAAACATGAAACTGCTAAAAGTTCAAAATATAGAGGAAGTTCCTTACAAATTAGGCGACCTTGAACGCACCATTTTATTGCTAGGCTGGCTTGCGCTAGGTAGGAAGGCAGAATTACAGAATGTGCAAAGTTTCTTCGGGAAATAGCAaccaaaaatttaaaaaaagtcgtttttaaaaaatgaatcttGTTTAGACCAGCACCCATTTCTTGGCATTGGACGATGGAGCACATTTTAACGCCAAAGGTGGAAGAAGTGAAATTGTTGGATCGATACACTGCAAAGAAGCCAGCCATTGGCACTCTCTATCTAACAGCAACCCATCTAATCTTTGTGGAGACCTCCTGTCACATTCGCAAGGAAACCTGGATGTTACACCATCTCATAGCCACAGTAGAGAAACTCCCTCTTACAGCCATGGGATGCCCACTTCACATTTCCTGCAAGAATTTCCATGTGGCTCACTTTGTGATTTCCAGTGAGAGGGACTGCCAAAATGTTCATCAGTCCCTGGTCAGACTCTCCCAACCAGGGAAAGTGGAAGAGTTGTATGCTTTTCTTTACAACCCAAAACAAGATGAAGATGAGAGAAGAAATGGTTGGGGCTTTATTGACTCAGCCATGGATTTCAAAAGAATGGGATTGCCCAATGAGTTTTGGGAAATGACAGACCTCAACAAGAACTATGAGCTTTGCAGCACATATCACTCAGAACTGGGCATTCCTAAAACCGCAAGCAAGGGCACAGTCTTTGGGAGTGCCAAATTCAGGAGCAGGGGGCGCattcctactctctcctactaccACAAGGAAAGTAATGCTGCCATTTGCCGCTGTAGCCAGCCCCTGTCCGGGTTAAGTGCTCGATGTGTAGAAGATGAGGAGATGCTACAGGCAATCAGCCGGGCTAATCCCAAAAGCACCTTCATGTATGTGGTGGATACCAGGCCTAAGTTGAATGCCATGGCCAATAGAGCAGCAGGAAAGGGATACGAGAATGAGGACAACTACTCAAACATCTGCTTTCAGTTTGTGGGCATTGAGAATATCCATGTCATGAGGAACAGTCTGCAGAAGCTTCTGGAAGTGTGTGCTATGAAGTCTCCAACAATGAGTGACTACTTGACGGGACTGGAGAATTCTGGTTGGCTGCGTCACATCAAGGCTGTGATGGATGCTGGAGTATTTCTGGCTAAGGCTGTGGCTGAGGATAAGGCTAGTGTGCTTGTACACTGCTCAGATGGCTGGGATCGCACAGCTCAGGTGTGTTCTTTGGCAAGCATCCTCTTGGACCCCTTCTATCGTACCATCAAGGGACTCATGGTTTTGATAGAAAAAGAATGGATATCTATGGGGCATAAATTCACACAAAGgtgTGGGCATGTGGATGGGGATCCCAAGGAGGTGTCCCCTGTATTCACCCAGTTCATTGAATGTCTTTGGAATCTCATGGAGCAGTACCCTTGTGGCTTTGAGTACAACGAGAAGTACCTTTTGGAAATCCACAACCATGTTTACTCCTGCCAGTTTGGAAATTTCATTGGCAACTgccaaagagagcgagaggagatgCGACTTTATGAGAGGACCTTCTCAGTTTGGCCATTTCTCTGGGAGAACCGCCATCAGTACAGAAATCCTCTGCACAAATGCTCATTAGGGAGGGAGGTTCTGAGGCCAAGCACATTGCCGTTGAATTTCAAGTTTTGGTGTGGCATGTATAATCATTTTGACAAGGGCATGCAGCCAAAGCAGTCCATTCTGGATCACCTGTTAACCATAACACAGAAAAAGGCAGAGGGTGAGAAGAAAATGACAGATCTCCAGATACAGTTGGCAGTCATGGATGGGGTTCTGGCAGATCAGGGCAGTCCAACAGGCACGCCACCTGAACAAACCTCTTTGTCTCCTGTATCGGTTAGCCACACAGCCGAAAATGCTAAACCACTCATGAATGGCGCTGCAGTGGAGGAGGCTGAAATAGAGTTGGTACCTACTGCAGGGAGCGAGAAGATGGAACCAGTAGCTATAGAAAATTGAGTTACTGCCACAAAGGGCACAGTTGTTTCCATGGAGATCAAAGATGTCAGAGGAGGGACAAAGTTCCTCTGAAATAACCACTGAAGCAGTTAAGCTTGTGGCCTGATTATCCAATCTGTTAGTTGACTGAGCAAATTACAGCCTTATTGATGAAACTAATTCTGATCCAATTCTTTAGCAGCCATAGAAgttgaacatttatttaacaatttATTTTACAACCTTTTTGGGGGGATAAATACAGtgtctttggaaagtattcagaccgcttgacttattccacagtttgttacgttacagccttattaacaGTTTTTACATATGTATTACTATGTTACGTatgtttactcagtactttgaaatcgctgccaaaggtgcttcaacagctacacgcttggtacacctgtatttggggagtttctcccattattctctgcagatcctctcaagctctgtcaggttgga
>XM_021618369.2
CACACTACTAAGTAATGCATGGTAGGCATTTCTTTCCTGTGCAAATGGTCCTACTGTAGCACAAATGACACATGGCTACATGAATTTGAAAACTGCTACACTGTCAAATTTGACTAACTTTGTAACATTTCGCTTGAAACATGAAACTGCTAAAAGTTCAAAATATAGAGGAAGTTCCTTACAAATTAGGCGACCTTGAACGCACCATTTTATTGCTAGGCTGGCTTGCGCTAGGTAGGAAGGCAGAATTACAGAATGTGCAAAGTTTCTTCGGGAAATAGCAaccaaaaatttaaaaaaagtcgtttttaaaaaatgaatcttGTTTAGACCAGCACCCATTTCTTGGCATTGGACGATGGAGCACATTTTAACGCCAAAGGTGGAAGAAGTGAAATTGTTGGATCGATACACTGCAAAGAAGCCAGCCATTGGCACTCTCTATCTAACAGCAACCCATCTAATCTTTGTGGAGACCTCCTGTCACATTCGCAAGGAAACCTGGATGTTACACCATCTCATAGCCACAGTAGAGAAACTCCCTCTTACAGCCATGGGATGCCCACTTCACATTTCCTGCAAGAATTTCCATGTGGCTCACTTTGTGATTTCCAGTGAGAGGGACTGCCAAAATGTTCATCAGTCCCTGGTCAGACTCTCCCAACCAGGGAAAGTGGAAGAGTTGTATGCTTTTCTTTACAACCCAAAACAAGATGAAGATGAGAGAAGAAATGGTTGGGGCTTTATTGACTCAGCCATGGATTTCAAAAGAATGGGATTGCCCAATGAGTTTTGGGAAATGACAGACCTCAACAAGAACTATGAGCTTTGCAGCACATATCACTCAGAACTGGGCATTCCTAAAACCGCAAGCAAGGGCACAGTCTTTGGGAGTGCCAAATTCAGGAGCAGGGGGCGCattcctactctctcctactaccACAAGGAAAGTAATGCTGCCATTTGCCGCTGTAGCCAGCCCCTGTCCGGGTTAAGTGCTCGATGTGTAGAAGATGAGGAGATGCTACAGGCAATCAGCCGGGCTAATCCCAAAAGCACCTTCATGTATGTGGTGGATACCAGGCCTAAGTTGAATGCCATGGCCAATAGAGCAGCAGGAAAGGGATACGAGAATGAGGACAACTACTCAAACATCTGCTTTCAGTTTGTGGGCATTGAGAATATCCATGTCATGAGGAACAGTCTGCAGAAGCTTCTGGAAGTGTGTGCTATGAAGTCTCCAACAATGAGTGACTACTTGACGGGACTGGAGAATTCTGGTTGGCTGCGTCACATCAAGGCTGTGATGGATGCTGGAGTATTTCTGGCTAAGGCTGTGGCTGAGGATAAGGCTAGTGTGCTTGTACACTGCTCAGATGGCTGGGATCGCACAGCTCAGGTGTGTTCTTTGGCAAGCATCCTCTTGGACCCCTTCTATCGTACCATCAAGGGACTCATGGTTTTGATAGAAAAAGAATGGATATCTATGGGGCATAAATTCACACAAAGgtgTGGGCATGTGGATGGGGATCCCAAGGAGGTGTCCCCTGTATTCACCCAGTTCATTGAATGTCTTTGGAATCTCATGGAGCAGTACCCTTGTGGCTTTGAGTACAACGAGAAGTACCTTTTGGAAATCCACAACCATGTTTACTCCTGCCAGTTTGGAAATTTCATTGGCAACTgccaaagagagcgagaggagatgCGACTTTATGAGAGGACCTTCTCAGTTTGGCCATTTCTCTGGGAGAACCGCCATCAGTACAGAAATCCTCTGCACAAATGCTCATTAGGGAGGGAGGTTCTGAGGCCAAGCACATTGCCGTTGAATTTCAAGTTTTGGTGTGGCATGTATAATCATTTTGACAAGGGCATGCAGCCAAAGCAGTCCATTCTGGATCACCTGTTAACCATAACACAGAAAAAGGCAGAGGGTGAGAAGAAAATGACAGATCTCCAGATATTGGCAGTCATGGATGGGGTTCTGGCAGATCAGGGCAGTCCAACAGGCACGCCACCTGAACAAACCTCTTTGTCTCCTGTATCGGTTAGCCACACAGCCGAAAATGCTAAACCACTCATGAATGGCGCTGCAGTGGAGGAGGCTGAAATAGAGTTGGTACCTACTGCAGGGAGCGAGAAGATGGAACCAGTAGCTATAGAAAATTGAGTTACTGCCACAAAGGGCACAGTTGTTTCCATGGAGATCAAAGATGTCAGAGGAGGGACAAAGTTCCTCTGAAATAACCACTGAAGCAGTTAAGCTTGTGGCCTGATTATCCAATCTGTTAGTTGACTGAGCAAATTACAGCCTTATTGATGAAACTAATTCTGATCCAATTCTTTAGCAGCCATAGAAgttgaacatttatttaacaatttATTTTACAACCTTTTTGGGGGGATAAATACAGtgtctttggaaagtattcagaccgcttgacttattccacagtttgttacgttacagccttattaacaGTTTTTACATATGTATTACTATGTTACGTatgtttactcagtactttgaaatcgctgccaaaggtgcttcaacagctacacgcttggtacacctgtatttggggagtttctcccattattctctgcagatcctctcaagctctgtcaggttgga

Function

NR:

description
myotubularin-related protein 8-like isoform X2

GO:

id name namespace
GO:0016311 dephosphorylation biological_process
GO:0005635 nuclear envelope cellular_component
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG:

id description
K18083 MTMR6_7_8; myotubularin-related protein 6/7/8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021618368.2 False 2640 mRNA 0.45 14 37958407 37965805
XM_021618369.2 True 2638 mRNA 0.45 14 37958407 37965806

Neighbor

gene id symbol gene type direction distance location
asb12a LOC106603316 coding downstream 10527 37945479 ~ 37947880 (-)
amer1 LOC106603317 coding downstream 15355 37939057 ~ 37943052 (-)
LOC110533826 LOC106603319 coding downstream 32355 37899074 ~ 37926052 (-)
LOC110533824 LOC106603320 coding downstream 90550 37843534 ~ 37867857 (-)
LOC110533823 LOC106603321 coding downstream 254368 37518096 ~ 37704039 (-)
arhgap20b LOC106603313 coding upstream 100000 38065806 ~ 38112816 (-)
LOC110533836 LOC106603311 coding upstream 161620 38127426 ~ 38135731 (-)
LOC110533838 LOC106603309 coding upstream 279210 38245016 ~ 38280006 (-)
LOC110533841 LOC106603307 coding upstream 370601 38336407 ~ 38434401 (-)
LOC110533842 LOC106603306 coding upstream 579246 38545052 ~ 38617748 (-)
G885454 NA non-coding downstream 138212 37819902 ~ 37820195 (-)
G885452 NA non-coding downstream 140284 37817890 ~ 37818123 (-)
G885451 NA non-coding downstream 142262 37815901 ~ 37816145 (-)
G885253 NA non-coding downstream 160391 37797680 ~ 37798016 (-)
G885245 NA non-coding downstream 166796 37791372 ~ 37791611 (-)
G885511 NA non-coding upstream 3005 37968811 ~ 37969025 (-)
G885515 NA non-coding upstream 6282 37972088 ~ 37972315 (-)
G885526 NA non-coding upstream 25426 37991232 ~ 37992645 (-)
G885532 NA non-coding upstream 34790 38000596 ~ 38000908 (-)
G885533 NA non-coding upstream 35335 38001141 ~ 38001341 (-)
G884736 NA other downstream 639543 37316917 ~ 37318864 (-)
scn4bb LOC106603364 other downstream 1293050 36652707 ~ 36665717 (-)
G883754 NA other downstream 1565880 36391103 ~ 36392527 (-)
G883753 NA other downstream 1567493 36389997 ~ 36390914 (-)
G885767 NA other upstream 273144 38238950 ~ 38240559 (-)
rpl36a LOC106568029 other upstream 1217892 39183698 ~ 39185578 (-)
G887329 NA other upstream 1251507 39217313 ~ 39217738 (-)
ksr1a LOC106603285 other upstream 1889160 39843126 ~ 39893728 (-)
LOC110533878 LOC106603271 other upstream 2530908 40496714 ~ 40547393 (-)

Expression


Co-expression Network