arhgap20b (LOC106603313)


Basic Information

Item Value
gene id arhgap20b
gene name LOC106603313
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 38065806 ~ 38112816 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021618374.2
GTCTGCCCCATCCTCAGTGTGCTGCACACTGGCTACTGTGTGAGGAGACTGGGATGGGATATCCTTATTTAGTCAGTGAGGTGGAAAGAGGGAGGCCCAGCTCAGAAAGCAGTGAGATTTGGGAAAGGGCAGGAAAAGGGTGCCTCTTACGGTACCACTCTAAAGGGCTCTCAGTACAAGCAAATTATTTTGTCAAACAAAGTGTGACTATGATTTTTTGCTACCTTTAAAAACGTTCCTCTGTAGTGAACGGCAGCATCGAAGTGCACCGGGACATTACACTGACTGCGTTTGTGACCTGCTGGGCTTAAAAAGATGACCCCTCAACAAAGCATTGGCTCCCACTCCAAAGTAAACTGCAATGAGTCAAGGATTCCAGAGAAGGAGAAGGGATGCCGTCCCAGTCCCATCACCAAGAGCAGCGCTGATCCAGAACCTAACATCCCAGAGTGCAGAGTTTGTGATGGAAGAGCACGTGCAGCTCAGCACTGGACTGCAGACCCAGGAGAGACACTTGTTCCTCTTCAGTGACACACTCATTATCGCTAAATCAAAGTCTTCCACAAGCCGCAAACGGAAGGTGAGAGTGAGGCTGTGTGAGATATGGTTGGCTTCCTGCATGGAAGAGGTTGCAGAGAGAAAACTGTGCTCAAAGAACTCCTTTGTCATTGGCTGGCCTACCACCAATTACGTGGTAACTCTCAGTTCATCAGAGTCAAAGGAGAAGTGGTTTTCCACTTTACAATGGCACATCACCAAATCCAAGGAAGTGGAATATCTCAGTAATCTCACCATGAAGGTTGTTCTCGTGGACATTGGAAATAGTGCAATGACGACTGTGAATGTGGACAATACATGTGATGTTGACAAAGTCATCAGGATCCTCACCCAACAATTTAAACTCACTGGCAGACCCACTGACTACCGCCTCTGGGTAGTCTCGGGGAGAGAGGAAGCCCTATATCCTCTTATCGGTCATGAGCATCCCTTCAGTATTATTCTGAACTCCTTGAGGGAAATGGACCGCCAAGCCTTGACAGTCACCAACAACATTCTGACTGTAGATGGGAGCCTCTACCTTGATCACCTTCTTAAAGACGCTTCCGGCCCTCGCTTCATCCTTAGGCTAAAGGCTGAGGGGGGAGGACATGGTCGAGCAGATTCCTTTCAGAAACACATAAAGAGAAAGAAGTCTCTGTTAGACTGGGCTCTGAGAAGAGGACATGGCAGCCAAGGAGGTGGATATCCTGAATCCCCCACAACTCCTCacaagctctttggtctttcattGTCCTCCATCTGTCATCATGGAAATCTACCCAGACCCATCATGGACATGCTGTATCTGTTGTATCATGAGGGCCCCACCACCACAGGGATCTTCCGGCGCTCAGCCAATGCTAAGACATGCCGGGAACTTAAGGAAAGACTGAACTCTGGCAACAGTGTTCAGCTGGAGGGGGAGTCTGTGTTTGTTGCTGCATCAGTCATCACTGACTTTCTGCGCAACATCCCTGGCAGTGTGCTAAATACTGGTCTGTATGAGAAGTGGATGGAGGTCATGGCGGCTGATGATATTGAAGACAAGATTGAGTTGATAAAAGGGCTATTGAGCCAGCTTCCAGAGGATAATGTTACCTTGCTCCGCTACCTGTTCGCCCTTCTCTATCACATCCAGGAGAGCTCGCAGGAGAACCAGATGAACGCTTTGAACCTGGCTCTCTGTATCGCTCCCAACATGCTGTGGCTGCCCGTGCCCAAAGGGCCAGAGGAGGAGAGTCAGTCCACTAAAAAGGTTGCAGCTCTCATCCAACTACTCATTGAAAACACCCCGGCCATTTTTGGTAAAGATGTTGAGTGCATTTTTACTGAGACAAATTGTGAACAAGGAACTGTAGACGATGTCATGGTGGAGTCTTACCAGCAGCTCTATGTGTCTGATGATTGGGACTGGGAGAAGCAAGGAGGACTTCACTCTCCTAACAGGGAACCTTTATTCCTGTCTCCAGGGAAACTGGTcttgaaagaggagaaagagatttTGGGCCTTCTGAATGAGGTTGACTCCTTGAAAAAGCAATATGTGAGTGAGGAAAGTGCTTATAGCTGTGGAAATCTAGACTTTATGTCTTCACTGTCCAGTGGGTCTATATGCTCCCTGATGGGGACCCAGAGTCTTCGGTCAGCCCGCTGCTCCTCAGAACCCAGTGTGTCTCTGGCTTCTCCCCAGTCAGGGTCCCAAAGCCAGATCCACACTCCTGTTGCCCGTCAGTCCAGCTGCGATGCGGCAGTGATGTGTGGCTGTGCAGAccactcccaacacacacacaaaccccacgCTAAGGGGCTACTAAAGGGGAACAGCAGCCCCAGGGTAGGTGGCAGCAGATCTAGGTATGCCTTCTGGAGGTCCCCTCAGGTAGCTTCTAGGTTCTGGCACCCTGCCCAGAGGCTGGCCATGTCCAACAGATCCAGTTTCTCCAGCCTGTCCTCCGCAGCCACCTCACCGTCTGCCTCCTCTCTGAGCTCCATAGACAGTGCCTTTTCCTTCTGCTCTGACTCTGTGTCCTCTCCCAACGAGCCCAGCTCCCTACCCTTCCTGTTCGGCACGTCGGCACGGTTACGCCCTCTCACCCCAGACACTCCGAAGAAATTCCCAAAAGACTGGAGCATGACATTCCCAGTGGCAGTGGCTCAGGCACCCGAGGTTTTGGACTTGTATAATAAGTATgatgagagagaagaagacaagGAGCATTACCGTTCTAATAGCATTCTGAATAGAGAAGACTACCAGTTGCGTACGCAAAGCCTCTATAGTTTAAAAGGTGAGAATAGTCAAAGCCCTGTCTCTCAACCAGATGACAGTGAGAATTTTATCTCTGATTGGAGTGGGGAGCAGGTGCATCAGAGCCAGAAGGATAAAGTGTTTGAGACATCAGAGTCAAAAGGCCAGACCAAAGAAATATCCATTACACACATACAGCTGAGAAAAACAAACAACCAGGCTGTCAACAAAGAAGAGGTGAAGAGGACAAAAATGACATTTTACACCTCCTCTAACAGAATGCTGGTGAAGAAACAGTCTGATCAATCTGTGGAAGAGTGTGGCGTCTCTCTGGTGTCTGACACAGGGAGAGAACATAAGGAAAACAAGGAACTTCTCGGTCAGAGTGTGCAGGTCCACATACCCCAGACAGTGTTCTATGGTCAAAACACTCCACTGGTCCTTCAGTCTGTGTCAATCAGAcaatctgtcaacaacaaggaGAAAGGAGCAAAGACTAAAACAGAGATTGACTGTGGTGAGGTGGTCCCTGAACAGTTGGGTGGAGGATGCACCCATCTCTCCCAGACATCATATAAAACCAATGCCAAAACTGCAAGCACAATCAGCCACACTGTAAGAATAAAACTGCCAGCAACTGTCAGAAACACTGTGAGAGAATACTTCAGCTCAGGTGACAACAAGAATGGCAACTCGGATGCAAAAGCAATTGAAAAAAAACGTGTAAGTAAACTCCAGTAGCAAAGTAAAATGGCTGAACCAACAGAAAATGCCACAAAGCTATCACATGGTGAGGAATCAATTGTCTGATTGTACAAATGCTCATCACTTGGTGTTTTATAGTGGGTTATCAGAATGTAGATAATCAAGGATTACTTTACCTCCCTCTGTGTGTAAATATCTATGTATTTCTTGCTAAATTCTATATTAAGAATGGTGCAGATTAAATGCAGGAATTAGGATTAGTGATGAATGCAGATAAATGTATGATGAATGTGTAATGAAAGTTAAGCAAGGAAGTAAGACCGTGTCAGATGGTAAAGACTAAATGGGTTAGTACTTGCAGTTCATTTTGTCAAACTAGTCAGCTTGATAAACAATTTCAACAGTCTGTGCAATGTCCTGTGGGTTGTTGCTTAGAGGAAATGAATGGTATTTATGCAAACCACTCAGACAGAGCACCTCCTCCAACTGAATGGGGATGCTTAATGCTTTTGTATAGCAAATGGCTGAAGCTATGAATAAGGACCAGACATCTTGCCTTCAATGTCATGTGTGTGTTTACTGGAGGGACTGTGACATGTTCAAGAAGATGATAGGGATAATATGTCagggaaaaaataaaaatgtgaggCAAATTAGGTATAACATGCACAATTTGTATACGAGCAAACACTTATACAAATATAGTTCAGATAACACACAAAATAgctgtaaaaaatgtaaatacatgaGATGGAATATTATCCAAACTGAGTTCCAAATACTGTCAAGCGATTGCATGGTGTTCACATTTTCCTGATTCTAACTTTTATCGTTAAAGAAGAATTACAACATGAATCgcaa
>XM_021618373.2
TGTCTGCCCCATCCTCAGTGTGCTGCACACTGGCTACTGTGTGAGGAGACTGGGATGGGATATCCTTATTTAGTCAGTGAGGTGGAAAGAGGGAGGCCCAGCTCAGAAAGCAGTGAGATTTGGGAAAGGGCAGGAAAAGGGTGCCTCTTACGGTACCACTCTAAAGGGCTCTCAGTACAAGCAAATTATTTTGTCAAACAAAGTGTGACTATGATTTTTTGCTACCTTTAAAAACGTTCCTCTGTAGTGAACGGCAGCATCGAAGTGCACCGGGACATTACACTGACTGCGTTTGTGACCTGCTGGGCTTAAAAAGATGACCCCTCAACAAAGCATTGGCTCCCACTCCAAAGTAAACTGCAATGAGTCAAGGATTCCAGAGAAGGAGAAGAAAATGAGGACATCACTTCAGCGAAGACATTCTGGCCAATCAGCCATCACAAAGGCATTCAGCAAACCAAAGGGCCACAGGAGGGATGCCGTCCCAGTCCCATCACCAAGAGCAGCGCTGATCCAGAACCTAACATCCCAGAGTGCAGAGTTTGTGATGGAAGAGCACGTGCAGCTCAGCACTGGACTGCAGACCCAGGAGAGACACTTGTTCCTCTTCAGTGACACACTCATTATCGCTAAATCAAAGTCTTCCACAAGCCGCAAACGGAAGGTGAGAGTGAGGCTGTGTGAGATATGGTTGGCTTCCTGCATGGAAGAGGTTGCAGAGAGAAAACTGTGCTCAAAGAACTCCTTTGTCATTGGCTGGCCTACCACCAATTACGTGGTAACTCTCAGTTCATCAGAGTCAAAGGAGAAGTGGTTTTCCACTTTACAATGGCACATCACCAAATCCAAGGAAGTGGAATATCTCAGTAATCTCACCATGAAGGTTGTTCTCGTGGACATTGGAAATAGTGCAATGACGACTGTGAATGTGGACAATACATGTGATGTTGACAAAGTCATCAGGATCCTCACCCAACAATTTAAACTCACTGGCAGACCCACTGACTACCGCCTCTGGGTAGTCTCGGGGAGAGAGGAAGCCCTATATCCTCTTATCGGTCATGAGCATCCCTTCAGTATTATTCTGAACTCCTTGAGGGAAATGGACCGCCAAGCCTTGACAGTCACCAACAACATTCTGACTGTAGATGGGAGCCTCTACCTTGATCACCTTCTTAAAGACGCTTCCGGCCCTCGCTTCATCCTTAGGCTAAAGGCTGAGGGGGGAGGACATGGTCGAGCAGATTCCTTTCAGAAACACATAAAGAGAAAGAAGTCTCTGTTAGACTGGGCTCTGAGAAGAGGACATGGCAGCCAAGGAGGTGGATATCCTGAATCCCCCACAACTCCTCacaagctctttggtctttcattGTCCTCCATCTGTCATCATGGAAATCTACCCAGACCCATCATGGACATGCTGTATCTGTTGTATCATGAGGGCCCCACCACCACAGGGATCTTCCGGCGCTCAGCCAATGCTAAGACATGCCGGGAACTTAAGGAAAGACTGAACTCTGGCAACAGTGTTCAGCTGGAGGGGGAGTCTGTGTTTGTTGCTGCATCAGTCATCACTGACTTTCTGCGCAACATCCCTGGCAGTGTGCTAAATACTGGTCTGTATGAGAAGTGGATGGAGGTCATGGCGGCTGATGATATTGAAGACAAGATTGAGTTGATAAAAGGGCTATTGAGCCAGCTTCCAGAGGATAATGTTACCTTGCTCCGCTACCTGTTCGCCCTTCTCTATCACATCCAGGAGAGCTCGCAGGAGAACCAGATGAACGCTTTGAACCTGGCTCTCTGTATCGCTCCCAACATGCTGTGGCTGCCCGTGCCCAAAGGGCCAGAGGAGGAGAGTCAGTCCACTAAAAAGGTTGCAGCTCTCATCCAACTACTCATTGAAAACACCCCGGCCATTTTTGGTAAAGATGTTGAGTGCATTTTTACTGAGACAAATTGTGAACAAGGAACTGTAGACGATGTCATGGTGGAGTCTTACCAGCAGCTCTATGTGTCTGATGATTGGGACTGGGAGAAGCAAGGAGGACTTCACTCTCCTAACAGGGAACCTTTATTCCTGTCTCCAGGGAAACTGGTcttgaaagaggagaaagagatttTGGGCCTTCTGAATGAGGTTGACTCCTTGAAAAAGCAATATGTGAGTGAGGAAAGTGCTTATAGCTGTGGAAATCTAGACTTTATGTCTTCACTGTCCAGTGGGTCTATATGCTCCCTGATGGGGACCCAGAGTCTTCGGTCAGCCCGCTGCTCCTCAGAACCCAGTGTGTCTCTGGCTTCTCCCCAGTCAGGGTCCCAAAGCCAGATCCACACTCCTGTTGCCCGTCAGTCCAGCTGCGATGCGGCAGTGATGTGTGGCTGTGCAGAccactcccaacacacacacaaaccccacgCTAAGGGGCTACTAAAGGGGAACAGCAGCCCCAGGGTAGGTGGCAGCAGATCTAGGTATGCCTTCTGGAGGTCCCCTCAGGTAGCTTCTAGGTTCTGGCACCCTGCCCAGAGGCTGGCCATGTCCAACAGATCCAGTTTCTCCAGCCTGTCCTCCGCAGCCACCTCACCGTCTGCCTCCTCTCTGAGCTCCATAGACAGTGCCTTTTCCTTCTGCTCTGACTCTGTGTCCTCTCCCAACGAGCCCAGCTCCCTACCCTTCCTGTTCGGCACGTCGGCACGGTTACGCCCTCTCACCCCAGACACTCCGAAGAAATTCCCAAAAGACTGGAGCATGACATTCCCAGTGGCAGTGGCTCAGGCACCCGAGGTTTTGGACTTGTATAATAAGTATgatgagagagaagaagacaagGAGCATTACCGTTCTAATAGCATTCTGAATAGAGAAGACTACCAGTTGCGTACGCAAAGCCTCTATAGTTTAAAAGGTGAGAATAGTCAAAGCCCTGTCTCTCAACCAGATGACAGTGAGAATTTTATCTCTGATTGGAGTGGGGAGCAGGTGCATCAGAGCCAGAAGGATAAAGTGTTTGAGACATCAGAGTCAAAAGGCCAGACCAAAGAAATATCCATTACACACATACAGCTGAGAAAAACAAACAACCAGGCTGTCAACAAAGAAGAGGTGAAGAGGACAAAAATGACATTTTACACCTCCTCTAACAGAATGCTGGTGAAGAAACAGTCTGATCAATCTGTGGAAGAGTGTGGCGTCTCTCTGGTGTCTGACACAGGGAGAGAACATAAGGAAAACAAGGAACTTCTCGGTCAGAGTGTGCAGGTCCACATACCCCAGACAGTGTTCTATGGTCAAAACACTCCACTGGTCCTTCAGTCTGTGTCAATCAGAcaatctgtcaacaacaaggaGAAAGGAGCAAAGACTAAAACAGAGATTGACTGTGGTGAGGTGGTCCCTGAACAGTTGGGTGGAGGATGCACCCATCTCTCCCAGACATCATATAAAACCAATGCCAAAACTGCAAGCACAATCAGCCACACTGTAAGAATAAAACTGCCAGCAACTGTCAGAAACACTGTGAGAGAATACTTCAGCTCAGGTGACAACAAGAATGGCAACTCGGATGCAAAAGCAATTGAAAAAAAACGTGTAAGTAAACTCCAGTAGCAAAGTAAAATGGCTGAACCAACAGAAAATGCCACAAAGCTATCACATGGTGAGGAATCAATTGTCTGATTGTACAAATGCTCATCACTTGGTGTTTTATAGTGGGTTATCAGAATGTAGATAATCAAGGATTACTTTACCTCCCTCTGTGTGTAAATATCTATGTATTTCTTGCTAAATTCTATATTAAGAATGGTGCAGATTAAATGCAGGAATTAGGATTAGTGATGAATGCAGATAAATGTATGATGAATGTGTAATGAAAGTTAAGCAAGGAAGTAAGACCGTGTCAGATGGTAAAGACTAAATGGGTTAGTACTTGCAGTTCATTTTGTCAAACTAGTCAGCTTGATAAACAATTTCAACAGTCTGTGCAATGTCCTGTGGGTTGTTGCTTAGAGGAAATGAATGGTATTTATGCAAACCACTCAGACAGAGCACCTCCTCCAACTGAATGGGGATGCTTAATGCTTTTGTATAGCAAATGGCTGAAGCTATGAATAAGGACCAGACATCTTGCCTTCAATGTCATGTGTGTGTTTACTGGAGGGACTGTGACATGTTCAAGAAGATGATAGGGATAATATGTCagggaaaaaataaaaatgtgaggCAAATTAGGTATAACATGCACAATTTGTATACGAGCAAACACTTATACAAATATAGTTCAGATAACACACAAAATAgctgtaaaaaatgtaaatacatgaGATGGAATATTATCCAAACTGAGTTCCAAATACTGTCAAGCGATTGCATGGTGTTCACATTTTCCTGATTCTAACTTTTATCGTTAAAGAAGAATTACAACATGAATCgcaa

Function

NR:

description
rho GTPase-activating protein 20-like isoform X1

GO: NA

KEGG:

id description
K20641 ARHGAP20; Rho GTPase-activating protein 20

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021618374.2 False 4354 mRNA 0.46 14 38065806 38112815
XM_021618373.2 True 4438 mRNA 0.46 15 38065806 38112816

Neighbor

gene id symbol gene type direction distance location
mtmr8 LOC106603315 coding downstream 100000 37958407 ~ 37965806 (-)
asb12a LOC106603316 coding downstream 117926 37945479 ~ 37947880 (-)
amer1 LOC106603317 coding downstream 122754 37939057 ~ 37943052 (-)
LOC110533826 LOC106603319 coding downstream 139754 37899074 ~ 37926052 (-)
LOC110533824 LOC106603320 coding downstream 197949 37843534 ~ 37867857 (-)
LOC110533836 LOC106603311 coding upstream 14610 38127426 ~ 38135731 (-)
LOC110533838 LOC106603309 coding upstream 132200 38245016 ~ 38280006 (-)
LOC110533841 LOC106603307 coding upstream 223591 38336407 ~ 38434401 (-)
LOC110533842 LOC106603306 coding upstream 432236 38545052 ~ 38617748 (-)
LOC110533851 LOC106603302 coding upstream 815653 38928469 ~ 38945732 (-)
G885509 NA non-coding downstream 1552 38062852 ~ 38064254 (-)
G885572 NA non-coding downstream 5341 38060184 ~ 38060465 (-)
G885569 NA non-coding downstream 8823 38056730 ~ 38056983 (-)
G885536 moes non-coding downstream 26138 38038109 ~ 38039668 (-)
G885533 NA non-coding downstream 64465 38001141 ~ 38001341 (-)
G885761 NA non-coding upstream 4386 38117202 ~ 38175357 (-)
G885827 NA non-coding upstream 122602 38235418 ~ 38235774 (-)
G885840 NA non-coding upstream 179976 38292792 ~ 38293032 (-)
G885869 NA non-coding upstream 242497 38355313 ~ 38355512 (-)
G885903 NA non-coding upstream 284676 38397492 ~ 38397953 (-)
LOC110533823 LOC106603321 other downstream 362020 37518096 ~ 37704039 (-)
G884736 NA other downstream 746942 37316917 ~ 37318864 (-)
scn4bb LOC106603364 other downstream 1400449 36652707 ~ 36665717 (-)
G883754 NA other downstream 1673279 36391103 ~ 36392527 (-)
G883753 NA other downstream 1674892 36389997 ~ 36390914 (-)
G885767 NA other upstream 126134 38238950 ~ 38240559 (-)
rpl36a LOC106568029 other upstream 1070882 39183698 ~ 39185578 (-)
G887329 NA other upstream 1104497 39217313 ~ 39217738 (-)
ksr1a LOC106603285 other upstream 1742150 39843126 ~ 39893728 (-)
LOC110533878 LOC106603271 other upstream 2383898 40496714 ~ 40547393 (-)

Expression


Co-expression Network