Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110534920 |
| gene name | LOC106603297 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 39120154 ~ 39121838 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: melatonin receptor type 1C-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110534920 | True | 733 | mRNA | 0.50 | 2 | 39120154 | 39121838 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533857 | LOC106603298 | coding | downstream | 24078 | 39024243 ~ 39096076 (-) |
| radx | cssa04hxorf57 | coding | downstream | 104034 | 39006334 ~ 39016120 (-) |
| LOC110533855 | LOC106603300 | coding | downstream | 119423 | 38984255 ~ 39000731 (-) |
| LOC110533854 | LOC106603301 | coding | downstream | 148092 | 38952608 ~ 38972062 (-) |
| LOC110533851 | LOC106603302 | coding | downstream | 174422 | 38928469 ~ 38945732 (-) |
| rpl36a | LOC106568029 | coding | upstream | 61921 | 39183698 ~ 39185578 (-) |
| LOC110533862 | NA | coding | upstream | 76127 | 39197965 ~ 39199921 (-) |
| LOC110533864 | LOC106603292 | coding | upstream | 188348 | 39310186 ~ 39634685 (-) |
| LOC110533865 | LOC106603290 | coding | upstream | 520150 | 39641988 ~ 39671377 (-) |
| LOC110533866 | LOC106603288 | coding | upstream | 549735 | 39671573 ~ 39748431 (-) |
| G886839 | NA | non-coding | downstream | 98154 | 39005186 ~ 39022000 (-) |
| G886799 | cxb1 | non-coding | downstream | 200219 | 38917578 ~ 38919935 (-) |
| G886744 | NA | non-coding | downstream | 211392 | 38906460 ~ 38908762 (-) |
| G886764 | NA | non-coding | downstream | 239385 | 38858769 ~ 38880769 (-) |
| G886729 | LOC106567779 | non-coding | downstream | 305166 | 38811888 ~ 38814988 (-) |
| G886892 | NA | non-coding | upstream | 7277 | 39129115 ~ 39129417 (-) |
| G886895 | NA | non-coding | upstream | 15896 | 39137734 ~ 39138012 (-) |
| G886929 | NA | non-coding | upstream | 65286 | 39187124 ~ 39187343 (-) |
| G886887 | NA | non-coding | upstream | 72257 | 39194095 ~ 39194480 (-) |
| G886936 | NA | non-coding | upstream | 72793 | 39194631 ~ 39194846 (-) |
| G885767 | NA | other | downstream | 879595 | 38238950 ~ 38240559 (-) |
| LOC110533823 | LOC106603321 | other | downstream | 1416368 | 37518096 ~ 37704039 (-) |
| G884736 | NA | other | downstream | 1801290 | 37316917 ~ 37318864 (-) |
| scn4bb | LOC106603364 | other | downstream | 2454797 | 36652707 ~ 36665717 (-) |
| G883754 | NA | other | downstream | 2727627 | 36391103 ~ 36392527 (-) |
| G887329 | NA | other | upstream | 95475 | 39217313 ~ 39217738 (-) |
| ksr1a | LOC106603285 | other | upstream | 733128 | 39843126 ~ 39893728 (-) |
| LOC110533878 | LOC106603271 | other | upstream | 1374876 | 40496714 ~ 40547393 (-) |
| G890360 | LOC106603260 | other | upstream | 2860863 | 41982701 ~ 41984417 (-) |
