LOC110533862


Basic Information

Item Value
gene id LOC110533862
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 39197965 ~ 39199921 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034354.1
ataaaatttgatttgatttgcattcAACTAatgtagataaacaacaacatatcacagtcaaagcAAGTAAGAAGTTTTTGAGAATGTTGTTGATGTTCGTCCGGctacttgcaaatgtattttcgtattttaaaatacatgtatttgaaTTAAATACAATACTTTGGTCTTTAGGATATTTTGTAGTTGTATTTTGTCATTTATGCTCGTCCTTGTCTGTGTCCTATTTCCTGTCTAAGGGGAGGATGTTCTGGCAGGTGTCTGGTCCTGGTGGATGTGTTGACCAGCAACACCTCAGTGCCCTGCTCCAGGAGCTCATCCAGGTCCCACGGCAGCCAGGAGAGGTGCCCGCCTTCGGAGGGAGCAACGTGGAGCCCAGCGTGGCCAGCTGCTTTCGCATGGCTCCTGGGAAAACCTCCATCCACTTCCTGGAGTGGATGAGCCTGGAGCTCCAGTCCGTGGTGTGGCTGTCTGTGCTGCAGCGAGTGGTCCAGGCAGAGAACGCCTAACACCAGGCCAAGTGCTCCACCTGGAAACAGTTTCCCATCAAGAGCTTTAGTCCACAGATGCTGAGATACGATTGTCTCATGTCCCATCTGAGACCACCAAAGTGGGGGATGTACATCCACACAATTCCTAGCCAACGCGTCTCCG

Function

NR:

description
dystrophin-related protein 2-like

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034354.1 True 654 mRNA 0.48 3 39197965 39199921

Neighbor

gene id symbol gene type direction distance location
rpl36a LOC106568029 coding downstream 12387 39183698 ~ 39185578 (-)
LOC110534920 LOC106603297 coding downstream 76127 39120154 ~ 39121838 (-)
LOC110533857 LOC106603298 coding downstream 101889 39024243 ~ 39096076 (-)
radx cssa04hxorf57 coding downstream 181845 39006334 ~ 39016120 (-)
LOC110533855 LOC106603300 coding downstream 197234 38984255 ~ 39000731 (-)
LOC110533864 LOC106603292 coding upstream 110265 39310186 ~ 39634685 (-)
LOC110533865 LOC106603290 coding upstream 442067 39641988 ~ 39671377 (-)
LOC110533866 LOC106603288 coding upstream 471652 39671573 ~ 39748431 (-)
LOC110533869 LOC106603287 coding upstream 571369 39771290 ~ 39775768 (-)
LOC110533108 LOC106603286 coding upstream 589956 39789877 ~ 39808636 (-)
G886940 NA non-coding downstream 408 39197198 ~ 39197557 (-)
G886938 NA non-coding downstream 2040 39195726 ~ 39195925 (-)
G886936 NA non-coding downstream 3119 39194631 ~ 39194846 (-)
G886887 NA non-coding downstream 3485 39194095 ~ 39194480 (-)
G886929 NA non-coding downstream 10622 39187124 ~ 39187343 (-)
G886946 NA non-coding upstream 1110 39201031 ~ 39201263 (-)
G886947 NA non-coding upstream 1535 39201456 ~ 39201736 (-)
G886950 LOC100194703 non-coding upstream 3387 39203308 ~ 39203563 (-)
G887324 NA non-coding upstream 9433 39209354 ~ 39209775 (-)
G887328 NA non-coding upstream 15988 39215909 ~ 39216176 (-)
G885767 NA other downstream 957406 38238950 ~ 38240559 (-)
LOC110533823 LOC106603321 other downstream 1494179 37518096 ~ 37704039 (-)
G884736 NA other downstream 1879101 37316917 ~ 37318864 (-)
scn4bb LOC106603364 other downstream 2532608 36652707 ~ 36665717 (-)
G887329 NA other upstream 17392 39217313 ~ 39217738 (-)
ksr1a LOC106603285 other upstream 655045 39843126 ~ 39893728 (-)
LOC110533878 LOC106603271 other upstream 1296793 40496714 ~ 40547393 (-)
G890360 LOC106603260 other upstream 2782780 41982701 ~ 41984417 (-)
G890385 LOC100136012 other upstream 2787790 41987711 ~ 41989801 (-)

Expression


Co-expression Network