XLOC_002749



Basic Information


Item Value
gene id XLOC_002749
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 22554349 ~ 22567208 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00006040
AAGACGTTCATGTAAGGCCAAGCCAAGCAAATGAATCTGTTAACCTCAAATCCCACCACCCTGCAGATCCCAACTGTTTTCCTTCAGTCCGAACGGAAGACATTTCTATCAGAGAGCTGTCAGACCCCTGCTGAGGCAAACGAGACATGGCGACCATTACCAAGACCACCCCGGAATAACAAAGGACAAAAATCCAATCGCAGCTTAATACCATTTACTGATGGAGGCAAATGTAACACGCATCTGTTTCTGACTATACACTACGCTGATTTTTCAAAGGCTTTTGAGCATGTCAAAATTTCTCTGTGATGTGATCACTAGTTGACGAGCTGAATGCATTTCTCCTGCCTCTACAGGAAAAAACAGCTTTGCTTGTCGAAGGAGCTGACAGTCTTTGTCTGTTTATAGTTCAAGCGAATGCACAAATATTGTGCGTTCTGTGCAGTGGTTATCAGGTCTGACAACGCTAAATTTTCCCTTGGGTTGGTGGATTTTGCAAACATATTTATTCATGGaaaagattattttttttgtctaaatttGAGTGAAATCAAACCTTCTTTTGCAGTGAAACTGAAACAGGCAATCAAGTGAAA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00006040 True 596 lncRNA 0.41 2 22554349 22567208

Neighbor


gene id symbol gene type direction distance location
XLOC_002748 NA coding downstream 19425 22530785 ~ 22534924 (-)
XLOC_002747 zgc:172339 coding downstream 48305 22501763 ~ 22506044 (-)
XLOC_002746 CT573337.1 coding downstream 56369 22494826 ~ 22497980 (-)
XLOC_002745 NA coding downstream 62891 22481158 ~ 22491458 (-)
XLOC_002744 BX005194.1 coding downstream 282446 22271789 ~ 22271903 (-)
XLOC_002750 NA coding upstream 37065 22604273 ~ 22607715 (-)
XLOC_002751 AL807389.3 coding upstream 185024 22752232 ~ 22752348 (-)
XLOC_002752 pcolcea coding upstream 222111 22789319 ~ 22803854 (-)
XLOC_002753 per1a coding upstream 242507 22809715 ~ 22831611 (-)
XLOC_002754 vamp2 coding upstream 271156 22838364 ~ 22845485 (-)
XLOC_002732 NA non-coding downstream 710486 21646154 ~ 21843863 (-)
XLOC_002731 NA non-coding downstream 904621 21627807 ~ 21649728 (-)
XLOC_002761 NA non-coding upstream 945914 23513122 ~ 23519215 (-)
XLOC_002762 NA non-coding upstream 950853 23518061 ~ 23520243 (-)
XLOC_002763 NA non-coding upstream 981768 23548976 ~ 23549882 (-)

Expression



Co-expression Network