LOC118937086


Basic Information

Item Value
gene id LOC118937086
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 43113142 ~ 43113351 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034481.1
CTGAAGTGATGAACTTGTTTATCCATTCGCTGAGTGCTGCTGGGCCCTGGCATTGCAGCCTCCTGTGTCTGTTCTTGACTCAGGGGGTTCAGCGGCCTGACTCTATGCTTTTGTCCCCAGTGTTCTACTGGGGTAACTGTTGGGGCAGGTGTGCTGATGCACGTGTCAAGGGCCCGGTCACAACTAAGACGAGCGTAAACTCCTGATCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034481.1 True 210 mRNA 0.54 1 43113142 43113351

Neighbor

gene id symbol gene type direction distance location
LOC110533947 LOC106603194 coding upstream 4350 43101457 ~ 43108792 (+)
LOC118966780 NA coding upstream 16664 43094808 ~ 43096478 (+)
trnas-gcu-7 NA coding upstream 27618 43085443 ~ 43085524 (+)
LOC118937073 NA coding upstream 28110 43084899 ~ 43085032 (+)
LOC110533942 NA coding upstream 86105 43014708 ~ 43028438 (+)
LOC118937076 NA coding downstream 220 43113571 ~ 43113650 (+)
LOC118937087 NA coding downstream 843 43114194 ~ 43114404 (+)
LOC118937079 NA coding downstream 1572 43114923 ~ 43115061 (+)
LOC118937075 NA coding downstream 2215 43115566 ~ 43115643 (+)
LOC110533952 LOC106603217 coding downstream 47743 43161094 ~ 43164195 (+)
G891171 NA non-coding upstream 43011 43063094 ~ 43070131 (+)
G891157 LOC106603199 non-coding upstream 76316 43033997 ~ 43036826 (+)
G891142 NA non-coding upstream 119529 42993042 ~ 42993613 (+)
G891093 NA non-coding upstream 186258 42926681 ~ 42926884 (+)
G891207 NA non-coding downstream 33587 43146938 ~ 43147169 (+)
G891209 NA non-coding downstream 34822 43148173 ~ 43150220 (+)
G891211 NA non-coding downstream 36028 43149379 ~ 43149739 (+)
G891235 LOC106563397 non-coding downstream 78340 43191691 ~ 43191946 (+)
G891133 NA other upstream 3466 42982682 ~ 43109676 (+)
G891188 NA other upstream 15525 43096720 ~ 43097617 (+)
G890228 NA other upstream 959364 42078215 ~ 42154093 (+)
G889906 LOC106603262 other upstream 1395850 41712327 ~ 41717292 (+)
LOC110533845 LOC106603305 other upstream 4301003 38755443 ~ 38815017 (+)
G891741 NA other downstream 420965 43534316 ~ 43600230 (+)
G891740 LOC106603170 other downstream 429115 43542466 ~ 43555517 (+)
G891847 NA other downstream 599194 43712545 ~ 43713082 (+)
LOC110533965 LOC106603163 other downstream 620206 43732222 ~ 43741030 (+)
G891856 NA other downstream 629566 43742917 ~ 43743490 (+)

Expression


Co-expression Network