LOC118937087


Basic Information

Item Value
gene id LOC118937087
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 43114194 ~ 43114404 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034482.1
GTGAGATGATGAATGTGTTTATCCATTCTCTGAGTGCTTGCTAGGGTCCTGCTTTCTCTGTGGTGCGCATGTCTGTTTTAGCCATGAGTGTCTGCTGTGTCCCGGGATCCACTCTGCCACCTCAGTGTTCTACTGGGGCAGCTCATGCTGGAGCCAGGGGCAGGACTGGAGGGCCCTGCGATAACAAAGACGAGTTGACACACCTGATCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034482.1 True 211 mRNA 0.54 1 43114194 43114404

Neighbor

gene id symbol gene type direction distance location
LOC118937076 NA coding upstream 544 43113571 ~ 43113650 (+)
LOC118937086 NA coding upstream 843 43113142 ~ 43113351 (+)
LOC110533947 LOC106603194 coding upstream 5402 43101457 ~ 43108792 (+)
LOC118966780 NA coding upstream 17716 43094808 ~ 43096478 (+)
trnas-gcu-7 NA coding upstream 28670 43085443 ~ 43085524 (+)
LOC118937079 NA coding downstream 519 43114923 ~ 43115061 (+)
LOC118937075 NA coding downstream 1162 43115566 ~ 43115643 (+)
LOC110533952 LOC106603217 coding downstream 46690 43161094 ~ 43164195 (+)
LOC110533955 LOC106603171 coding downstream 192379 43306783 ~ 43461015 (+)
LOC110533958 LOC106603168 coding downstream 451831 43566235 ~ 43613250 (+)
G891171 NA non-coding upstream 44063 43063094 ~ 43070131 (+)
G891157 LOC106603199 non-coding upstream 77368 43033997 ~ 43036826 (+)
LOC110533942 NA non-coding upstream 85756 43014708 ~ 43028438 (+)
G891142 NA non-coding upstream 120581 42993042 ~ 42993613 (+)
G891093 NA non-coding upstream 187310 42926681 ~ 42926884 (+)
G891207 NA non-coding downstream 32534 43146938 ~ 43147169 (+)
G891209 NA non-coding downstream 33769 43148173 ~ 43150220 (+)
G891211 NA non-coding downstream 34975 43149379 ~ 43149739 (+)
G891235 LOC106563397 non-coding downstream 77287 43191691 ~ 43191946 (+)
G891133 NA other upstream 4518 42982682 ~ 43109676 (+)
G891188 NA other upstream 16577 43096720 ~ 43097617 (+)
G890228 NA other upstream 960416 42078215 ~ 42154093 (+)
G889906 LOC106603262 other upstream 1396902 41712327 ~ 41717292 (+)
LOC110533845 LOC106603305 other upstream 4302055 38755443 ~ 38815017 (+)
G891741 NA other downstream 419912 43534316 ~ 43600230 (+)
G891740 LOC106603170 other downstream 428062 43542466 ~ 43555517 (+)
G891847 NA other downstream 598141 43712545 ~ 43713082 (+)
LOC110533965 LOC106603163 other downstream 619153 43732222 ~ 43741030 (+)
G891856 NA other downstream 628513 43742917 ~ 43743490 (+)

Expression


Co-expression Network