LOC110533984 (LOC106603148)


Basic Information

Item Value
gene id LOC110533984
gene name LOC106603148
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 44079886 ~ 44085270 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021618598.2
TCCACTCACTGCAGAGGGGGTTCTTATGCATGTACTAGGAGTCTGATGTTCATTATAACAGAATTTCAGGGCACAGGACTGTTTACCAGAACGGTGTAGCATACATGAGGGGTGGGGTTCAGTTACACTAAAATCCCTAACACgggcagatagagggagagagagagggagggagagagagagagaagtggagggagagCACCAGAAGAGGAATACAACAAGGGATGAAAGGCGACACCCCAGTGAACAGCACCATGAGTGTTGGCCAAGCCAGGAAGCTGGTGGAGCAATTGAAGATTGAAGCCAGTTTTTGCAGGATCAAGGTATCAAAGGCGGCTGCAGACCTGATGGCATACTGTGATAACCACGCGATTGAGGACCCCCTCATCACCCCTGTGCCCACCTCAGAGAACCCATTCAGGGAGAAGAAGCTCTTCTGTGCACTCCTTTGAGACAAGCCACAGGATGTTGTGAAATACAATGTCCAGACAAAAATGCAAACAATGCGTAACCATTAACATGAGTCATGATAGCCTTTCATAACAAATACACATCTAAAACACACCAAGAACGCTAACAATCTTGAACCTGAAGAAAAACATACAAGTGGATATACTGTAAATATTATGCAACATGAAATAGCTCATTTCTGAAATCAACTCAATAGGCAAGATGGATGATGGAGGGGTGACAACACAAATTGGAATTATTTGTAACTTTTAATACACACTTCATGGTAAATATCCATTGCCTGCCCTAATCAGCCTTTGTTAAATAGTTTGTGTGCGACAGACAGTCCTGGATGTCACTTTTTTAATCTTTGTTGCAGAAATGTAGGTGCCACTGGATCAGTAATTGaatcttcatttaactaggcaagtcagttaagaacaaattcttatttacaatgacagcctaggaatagtgggttaactgccttgttcaggggcagaacgacggatttttaccttggggatttgatctagcaaccaaaaggctaggctacctgccgcccagtaAGAGGGTATTAAGAGGACAAGGCAATACACACTGACCCAAATAATTCCACTGGTGTGTACAAGTGGTAAGCTGCCTTAACACAGGATCAGTGATCTAAAAAGAGAGGTTCCCAATAAATGATCaatgatgtttatttatttaactaggcaagttaagaacaaattcttatttacaatggcggcctacaacggccaaacccggacgacgctgggcgaattgtgtgccgccctatgggactcccaatcacagccggttgtgatacagcctggataaaTGATAAGTGGTTTAATTTGTCAAGTGGGAGCCTAATAATAAATAAGTTATGCCTTTATGACAATATCATTAACTAAGAGGTACATTTCGAGACCAAGTCTTTAAGGTTGCTTAGGAATATTATCACTCTTAAGATCAATGTTACAATGTAGACCTTCACTGTTTATATTTCTTAAAAATAAAGAGCTCTGAATAAAAGGAGACGTCGGTAATCAAAGATTAAAATAAACACTGTCACCAAAAACAAGTTtgcatttcatttgtgattttatttcccccccaaaaatggcaaaaacaaaacaaacccaGAATTGTCCAGATCTTGCAGTTGGTTTTGTTCATTTcaaaagaaaaatataaaaacgaATATGCTTTCACAGTCAAAACACAAAAACATGAACCAGTATTTCAGAAAAACCATCATTCAGCAATTAAACGCGCATGCCTAGAAATTACTTCCTGGAACAACAGTGCTCCTTTTCGTGGGTTTACTTTAGGCTTTCATTTTGTGTGTGAAAATTAGGTGATTTGTGGTAGATAACTTAAGTAGAtcgtggat

Function

NR:

description
guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-3-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005834 heterotrimeric G-protein complex cellular_component
GO:0004871 obsolete signal transducer activity molecular_function

KEGG:

id description
K04540 GNG3; guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021618598.2 True 1852 mRNA 0.40 3 44079886 44085270

Neighbor

gene id symbol gene type direction distance location
LOC110533979 LOC106603150 coding downstream 49895 43996131 ~ 44029991 (-)
zgc:77262 rbm4 coding downstream 90935 43985831 ~ 43988951 (-)
LOC118966632 NA coding downstream 97504 43979834 ~ 43982382 (-)
LOC110533974 LOC106603153 coding downstream 113037 43909902 ~ 43966849 (-)
LOC110533973 LOC106603156 coding downstream 181698 43894085 ~ 43898188 (-)
LOC110533987 LOC106603145 coding upstream 38708 44123978 ~ 44134653 (-)
LOC110533988 LOC105010947 coding upstream 57474 44142744 ~ 44165566 (-)
LOC110533989 LOC106603141 coding upstream 87604 44172874 ~ 44179377 (-)
LOC110533117 stx5 coding upstream 113908 44199178 ~ 44209264 (-)
LOC110533991 pura2 coding upstream 127985 44213255 ~ 44218956 (-)
G893171 NA non-coding downstream 15140 44064447 ~ 44064746 (-)
G893071 NA non-coding downstream 102760 43884603 ~ 43977126 (-)
G893009 NA non-coding downstream 186060 43893045 ~ 43893826 (-)
LOC110533972 LOC106603159 non-coding downstream 234190 43838374 ~ 43846088 (-)
G892991 NA non-coding downstream 297803 43781694 ~ 43782083 (-)
G893201 NA non-coding upstream 53041 44138311 ~ 44138523 (-)
G893202 NA non-coding upstream 53587 44138857 ~ 44139077 (-)
G893222 NA non-coding upstream 84274 44169544 ~ 44169757 (-)
G893228 NA non-coding upstream 95744 44181014 ~ 44181216 (-)
G892965 NA other downstream 368917 43710485 ~ 43710969 (-)
LOC110533962 LOC106603031 other downstream 395966 43681449 ~ 43686604 (-)
LOC110533954 LOC106603192 other downstream 832251 43183815 ~ 43248006 (-)
LOC110533946 mpp1 other downstream 1009728 43057611 ~ 43070230 (-)
G890403 NA other downstream 2001939 42076741 ~ 42077947 (-)
LOC110534000 frmd8 other upstream 220949 44303605 ~ 44308978 (-)
G893541 NA other upstream 683180 44768450 ~ 44769072 (-)
LOC110534025 LOC106603111 other upstream 926059 45011329 ~ 45017446 (-)
LOC110534046 LOC107567170 other upstream 1662045 45747090 ~ 45751405 (-)

Expression


Co-expression Network