LOC110533989 (LOC106603141)


Basic Information

Item Value
gene id LOC110533989
gene name LOC106603141
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 44172874 ~ 44179377 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021618607.2
aaacaaaaaaatcccaTTCTAGCTCAGTGTATCTGCATTGAcccctcccttcatctctctcactccctttctcccaCTCATTCCACTTCTCCCTCTTaattcacctctctccctctcttttcttggCGTCAGTTTGATGGAGTATCTTTTCATTTCTTTGGTTCTCAGCAACAGCCTATCCCACACGCTTATGCACACTTACTATCCTAGTGTCTGGTGTCTAGTGTTTTGTGtctagtgtgtgagtgtgtgaaagaGACCCTGCCTATAGCTGCTGATACCCTGGATTTTTAAGATCGTTCATTTTGAGGCTCTGAGTTTGACGGCCACCCCCAGCAGCCACGGGTCCAGAGACTCCATCATCAGGCGCAgctggaagggggagaaagacaaGTAGCGAGAGAGCTGGGCTCCAGAGCGCACCAGCACTGGCAGCTGGGGGAAGAAGCGTTCTTCTCTGGGGCTGAACGAAGGTGCGAGCATGCGCTGCTCCACCCTCCTGTGTATCCTTGCGGGGGTGCTGCTGTACCTAGTGCTGGGGGCTGTGGTGTTCCAGGCTCTGGAGGCTCCTCGTGAGCAGGACCAGCACACGCAGCTGCAGGACACACGCAGATCGTTCCTGGAGAACTACACCTGCGTCAGCCCAGACATCCTGCAGGCTCTCATAGAGAAAGTGGCAGATGCCGTGGGAACTGGGGTGGATCCTAGCAGCAACTCCTCTACTTTCACCAGCCAATGGGACTTGGCTAGTGCCTTCTTCTTCTCTGggaccatcatcaccaccatcgGTTTTGGGAACATCTCCCCGAAGACGGAATGGGGGCAGCTGTTCTGTATCTTCTATGCCCTTGTGGGGATCCCTCTGTTTGGTATCCTGCTGGCTGGAGTTGGAGACCATCTGGGGACTGGGCTGAGGAAGGCCATCCTCAAAATAGAGTTCATCTTAGCGaaaTGGAAGGTCAGTCCTACTATTGTTCGTGTCATCTCAGCTGTCCTCTCCATCCTGTTGGGGGTAGCCATTTTTGTTGCTGTGCCAACGCTGGTGTTTCAGGAGGTGGAGAAATGGACTCTCCTGGAGGCTTCCTACTTTGTTGTCATCACTCTGACTACAGTGGGCTTTGGAGACTATGTTGCAGGTGATAGCGGAGATGGTGGGAAAGACCACTGGTACAAGCCTCTGGTGTGGTTCTGGATCCTGCTGGGCCTGGCCTACTTTGCCTCTATCCTGTCCATGATTGCAAACTGGCTTCGGGTCCTGTCCAAGAAGACCAGGGCTGAGatGGAGGAGCTCAGAGCCCGTACCACTGACTGGGGTCAGAACATCCAGAACATGTCCGTGGACTTCCGCATGCCAGACGACCCCTTCAAACGACGGAGGCGAAAGCATCGCCATGGTCCTCGCAGCCGGGGCCATGGGGCGGGTCATGTGTCTGGGACCAGGGCCcctggagagggggacagggtgACGGGGAATGGCCAGCTGAACAGCCAATCAGAGACTGGATCGTCCTCATACTCTTACTCCTCCAACGATTCCGAGTCGGGGTCAGGGTCTGAGACAGGGTCAGAGGCCACGCAGTCGGAGCGGGTAGTAGAGGGTAAAGAGAAGGATGTCGATAAGGAGAACGCCTTCCCAGAAGCCCTGTATTCCCAGCCTCTGGACTACTTTGGAGAGAATCTGGCATACATTGATGAGTCCTCAGACGCAGTGAGTGGGAAATTACATTTGGATCCCCTATTGGATTCAGCACAGCCCATCTCTGCACGCTCACGGAAGCCCAAGAGGAGACGGCCCAGAAGACCACCCCCAGAGAAGATCCCCAAAATCAGCCCTACCAAGCCTGAGAAGAAAGAGCCAAATGGAGACATACCCCCTGAAAATCCCCCGCCCCCTCCACCAAAGGATGGATGAACCAAATGCTCAAGCGTGAGTTTGTATGTCAGGTAAATGAACAGGAACTCTACTGGTAGCAGCCAAATTCTCCCCTTGGGAGAGCTTAATGATCTGACTAACCGGGGGGGGGGTTTATTTCCAGAGCATGTTGAAAGTGGATGGaagggaagaaaaagaagaagtgTTGTGAGAAGAACTGAACCTGATTGATATGTTTTATTCACTGCACTGTTTATGTTTTCTAAACATagtttgagtgtgtgtatgtcgTAATATGCCTGATTCTAATATGGACTAGGCCTTGATGTAATAGTAAAGTGACTTATTCAAATAATCCGAACAAAACTTAATCACCGTCACCACACTGACCTGACCTGAGGTTGCCTTGGTAGGGTTTTAATAATGTTTTAACGTGCCCCTCTCACCCATGTTTGTTTGAGCGCTCCCTACTGGGCAATCATGGAACTGCACAGCCCTGTTTCCTCTGGATAGAATCTGCAGTGAAGCACATCAACACAAAGGGTTTCTAACTCTGAATTAATCCCTATTGCTTTCGTCTTTACGGGAAAAAAACGCCTTACGACAATAACTCTACCATGATGAATTTGCCCTAAATATCTGGAGACCAAACTTTAGTAAACAAAGCTTTTGGTCTATAATAGGACAATTCAAGGCAGGAGTAAATCCTGTCTCTGCCAATAACCACTTCAGGTCTTGCATGACCTAGCCTAAGTATTACAGTACTGACTTTACTCATGCGTGCACTGTGTACAGCATATGCCATTGTATAAATTGTTCTGAGTATTATTCTTCAAATGTATTGCACAAAACTGTCATATAAAataaacctttaaaaaaaa
>XM_021618608.2
caaacaaaaaaatcccaTTCTAGCTCAGTGTATCTGCATTGAcccctcccttcatctctctcactccctttctcccaCTCATTCCACTTCTCCCTCTTaattcacctctctccctctcttttcttggCGTCAGTTTGATGGAGTATCTTTTCATTTCTTTGGTTCTCAGCAACAGCCTATCCCACACGCTTATGCACACTTACTATCCTAGTGTCTGGTGTCTAGTGTTTTGTGtctagtgtgtgagtgtgtgaaagaGACCCTGCCTATAGCTGCTGATACCCTGGATTTTTAAGATCGTTCATTTTGAGGCTCTGAGTTTGACGGCCACCCCCAGCAGCCACGGGTCCAGAGACTCCATCATCAGGCGCAgctggaagggggagaaagacaaGTAGCGAGAGAGCTGGGCTCCAGAGCGCACCAGCACTGGCAGCTGGGGGAAGAAGCGTTCTTCTCTGGGGCTGAACGAAGGTGCGAGCATGCGCTGCTCCACCCTCCTGTGTATCCTTGCGGGGGTGCTGCTGTACCTAGTGCTGGGGGCTGTGGTGTTCCAGGCTCTGGAGGCTCCTCGTGAGCAGGACCAGCACACGCAGCTGCAGGACACACGCAGATCGTTCCTGGAGAACTACACCTGCGTCAGCCCAGACATCCTGCAGGCTCTCATAGAGAAAGTGGCAGATGCCGTGGGAACTGGGGTGGATCCTAGCAGCAACTCCTCTACTTTCACCAGCCAATGGGACTTGGCTAGTGCCTTCTTCTTCTCTGggaccatcatcaccaccatcgGTTTTGGGAACATCTCCCCGAAGACGGAATGGGGGCAGCTGTTCTGTATCTTCTATGCCCTTGTGGGGATCCCTCTGTTTGGTATCCTGCTGGCTGGAGTTGGAGACCATCTGGGGACTGGGCTGAGGAAGGCCATCCTCAAAATAGAGTTCATCTTAGCGaaaTGGAAGGTCAGTCCTACTATTGTTCGTGTCATCTCAGCTGTCCTCTCCATCCTGTTGGGGGTAGCCATTTTTGTTGCTGTGCCAACGCTGGTGTTTCAGGAGGTGGAGAAATGGACTCTCCTGGAGGCTTCCTACTTTGTTGTCATCACTCTGACTACAGTGGGCTTTGGAGACTATGTTGCAGGTGATAGCGGAGATGGTGGGAAAGACCACTGGTACAAGCCTCTGGTGTGGTTCTGGATCCTGCTGGGCCTGGCCTACTTTGCCTCTATCCTGTCCATGATTGCAAACTGGCTTCGGGTCCTGTCCAAGAAGACCAGGGCTGAGatGGAGGAGCTCAGAGCCCGTACCACTGACTGGGGTCAGAACATCCAGAACATGTCCGTGGACTTCCGCATGCCAGACGACCCCTTCAAACGACGGAGGCGAAAGCATCGCCATGGTCCTCGCAGCCGGGGCCATGGGGCGGGTCATGTGTCTGGGACCAGGGCCcctggagagggggacagggtgACGGGGAATGGCCAGCTGAACAGCCAATCAGAGACTGGATCGTCCTCATACTCTTACTCCTCCAACGATTCCGAGTCGGGGTCAGGGTCTGAGACAGGGTCAGAGGCCACGCAGTCGGAGCGGGTAGTAGAGGGTAAAGAGAAGGATGTCGATAAGGAGAACGCCTTCCCAGAAGCCCTGTATTCCCAGCCTCTGGACTACTTTGGAGAGAATCTGGCATACATTGATGAGTCCTCAGACGCAGTGAGTGGGAAATTACATTTGGATCCCCTATTGGATTCAGCACAGCCCATCTCTGCACGCTCACGGAAGCCCAAGAGGAGACGGCCCAGAAGACCACCCCCAGAGAAGATCCCCAAAATCAGCCCTACCAAGCCTGAGAAGAAAGAGCCAAATGGAGACATACCCCCTGAAAATCCCCCGCCCCCTCCACCAAAGGATGGATGAACCAAATGCTCAAGCGTGAGTTTGTATGTCAGAGCATGTTGAAAGTGGATGGaagggaagaaaaagaagaagtgTTGTGAGAAGAACTGAACCTGATTGATATGTTTTATTCACTGCACTGTTTATGTTTTCTAAACATagtttgagtgtgtgtatgtcgTAATATGCCTGATTCTAATATGGACTAGGCCTTGATGTAATAGTAAAGTGACTTATTCAAATAATCCGAACAAAACTTAATCACCGTCACCACACTGACCTGACCTGAGGTTGCCTTGGTAGGGTTTTAATAATGTTTTAACGTGCCCCTCTCACCCATGTTTGTTTGAGCGCTCCCTACTGGGCAATCATGGAACTGCACAGCCCTGTTTCCTCTGGATAGAATCTGCAGTGAAGCACATCAACACAAAGGGTTTCTAACTCTGAATTAATCCCTATTGCTTTCGTCTTTACGGGAAAAAAACGCCTTACGACAATAACTCTACCATGATGAATTTGCCCTAAATATCTGGAGACCAAACTTTAGTAAACAAAGCTTTTGGTCTATAATAGGACAATTCAAGGCAGGAGTAAATCCTGTCTCTGCCAATAACCACTTCAGGTCTTGCATGACCTAGCCTAAGTATTACAGTACTGACTTTACTCATGCGTGCACTGTGTACAGCATATGCCATTGTATAAATTGTTCTGAGTATTATTCTTCAAATGTATTGCACAAAACTGTCATATAAAataaacctttaaaaaaaa
>XM_036990392.1
TGGATTCTTTGAAGGGGGTCTGCTGAGGGTAGCAGAGGGGGAGCTTGCTGCCCATTGCAGAGTCGGCAGTGTACCGCTAGCAGACCTCTTGTAAACTCCACGAAAGGAATTCATCCTGGCACTGTCAGACTGAGACACTGATACTGATAACTGCTCATGCACTTGGAGTCACAGAGctacactactacagtatattGCACAAGTAGGAATAAGTGTTACACTGTAAGTCTGAATTGTGGAAATGCTTACTACCACACTCACACGATGTGGACCACAATGTGGTAATCAGGCTCTGAGTTTGACGGCCACCCCCAGCAGCCACGGGTCCAGAGACTCCATCATCAGGCGCAgctggaagggggagaaagacaaGTAGCGAGAGAGCTGGGCTCCAGAGCGCACCAGCACTGGCAGCTGGGGGAAGAAGCGTTCTTCTCTGGGGCTGAACGAAGGTGCGAGCATGCGCTGCTCCACCCTCCTGTGTATCCTTGCGGGGGTGCTGCTGTACCTAGTGCTGGGGGCTGTGGTGTTCCAGGCTCTGGAGGCTCCTCGTGAGCAGGACCAGCACACGCAGCTGCAGGACACACGCAGATCGTTCCTGGAGAACTACACCTGCGTCAGCCCAGACATCCTGCAGGCTCTCATAGAGAAAGTGGCAGATGCCGTGGGAACTGGGGTGGATCCTAGCAGCAACTCCTCTACTTTCACCAGCCAATGGGACTTGGCTAGTGCCTTCTTCTTCTCTGggaccatcatcaccaccatcgGTTTTGGGAACATCTCCCCGAAGACGGAATGGGGGCAGCTGTTCTGTATCTTCTATGCCCTTGTGGGGATCCCTCTGTTTGGTATCCTGCTGGCTGGAGTTGGAGACCATCTGGGGACTGGGCTGAGGAAGGCCATCCTCAAAATAGAGTTCATCTTAGCGaaaTGGAAGGTCAGTCCTACTATTGTTCGTGTCATCTCAGCTGTCCTCTCCATCCTGTTGGGGGTAGCCATTTTTGTTGCTGTGCCAACGCTGGTGTTTCAGGAGGTGGAGAAATGGACTCTCCTGGAGGCTTCCTACTTTGTTGTCATCACTCTGACTACAGTGGGCTTTGGAGACTATGTTGCAGGTGATAGCGGAGATGGTGGGAAAGACCACTGGTACAAGCCTCTGGTGTGGTTCTGGATCCTGCTGGGCCTGGCCTACTTTGCCTCTATCCTGTCCATGATTGCAAACTGGCTTCGGGTCCTGTCCAAGAAGACCAGGGCTGAGatGGAGGAGCTCAGAGCCCGTACCACTGACTGGGGTCAGAACATCCAGAACATGTCCGTGGACTTCCGCATGCCAGACGACCCCTTCAAACGACGGAGGCGAAAGCATCGCCATGGTCCTCGCAGCCGGGGCCATGGGGCGGGTCATGTGTCTGGGACCAGGGCCcctggagagggggacagggtgACGGGGAATGGCCAGCTGAACAGCCAATCAGAGACTGGATCGTCCTCATACTCTTACTCCTCCAACGATTCCGAGTCGGGGTCAGGGTCTGAGACAGGGTCAGAGGCCACGCAGTCGGAGCGGGTAGTAGAGGGTAAAGAGAAGGATGTCGATAAGGAGAACGCCTTCCCAGAAGCCCTGTATTCCCAGCCTCTGGACTACTTTGGAGAGAATCTGGCATACATTGATGAGTCCTCAGACGCAGTGAGTGGGAAATTACATTTGGATCCCCTATTGGATTCAGCACAGCCCATCTCTGCACGCTCACGGAAGCCCAAGAGGAGACGGCCCAGAAGACCACCCCCAGAGAAGATCCCCAAAATCAGCCCTACCAAGCCTGAGAAGAAAGAGCCAAATGGAGACATACCCCCTGAAAATCCCCCGCCCCCTCCACCAAAGGATGGATGAACCAAATGCTCAAGCGTGAGTTTGTATGTCAGGTAAATGAACAGGAACTCTACTGGTAGCAGCCAAATTCTCCCCTTGGGAGAGCTTAATGATCTGACTAACCGGGGGGGGGGTTTATTTCCAGAGCATGTTGAAAGTGGATGGaagggaagaaaaagaagaagtgTTGTGAGAAGAACTGAACCTGATTGATATGTTTTATTCACTGCACTGTTTATGTTTTCTAAACATagtttgagtgtgtgtatgtcgTAATATGCCTGATTCTAATATGGACTAGGCCTTGATGTAATAGTAAAGTGACTTATTCAAATAATCCGAACAAAACTTAATCACCGTCACCACACTGACCTGACCTGAGGTTGCCTTGGTAGGGTTTTAATAATGTTTTAACGTGCCCCTCTCACCCATGTTTGTTTGAGCGCTCCCTACTGGGCAATCATGGAACTGCACAGCCCTGTTTCCTCTGGATAGAATCTGCAGTGAAGCACATCAACACAAAGGGTTTCTAACTCTGAATTAATCCCTATTGCTTTCGTCTTTACGGGAAAAAAACGCCTTACGACAATAACTCTACCATGATGAATTTGCCCTAAATATCTGGAGACCAAACTTTAGTAAACAAAGCTTTTGGTCTATAATAGGACAATTCAAGGCAGGAGTAAATCCTGTCTCTGCCAATAACCACTTCAGGTCTTGCATGACCTAGCCTAAGTATTACAGTACTGACTTTACTCATGCGTGCACTGTGTACAGCATATGCCATTGTATAAATTGTTCTGAGTATTATTCTTCAAATGTATTGCACAAAACTGTCATATAAAataaacctttaaaaaaaa

Function

NR:

description
potassium channel subfamily K member 4-like

GO: NA

KEGG:

id description
K04915 KCNK4, K2P4.1; potassium channel subfamily K member 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021618607.2 False 2754 mRNA 0.50 8 44172874 44178991
XM_021618608.2 False 2663 mRNA 0.50 9 44172874 44178992
XM_036990392.1 True 2733 mRNA 0.50 8 44172874 44179377

Neighbor

gene id symbol gene type direction distance location
LOC110533988 LOC105010947 coding downstream 7308 44142744 ~ 44165566 (-)
LOC110533987 LOC106603145 coding downstream 38221 44123978 ~ 44134653 (-)
LOC110533984 LOC106603148 coding downstream 87604 44079886 ~ 44085270 (-)
LOC110533979 LOC106603150 coding downstream 142883 43996131 ~ 44029991 (-)
zgc:77262 rbm4 coding downstream 183923 43985831 ~ 43988951 (-)
LOC110533117 stx5 coding upstream 19801 44199178 ~ 44209264 (-)
LOC110533991 pura2 coding upstream 33878 44213255 ~ 44218956 (-)
LOC110533990 LOC106603140 coding upstream 39670 44219047 ~ 44237878 (-)
LOC110533992 NA coding upstream 68887 44248264 ~ 44258913 (-)
tm7sf2 tm7sf2 coding upstream 108971 44288348 ~ 44294245 (-)
G893222 NA non-coding downstream 3117 44169544 ~ 44169757 (-)
G893202 NA non-coding downstream 33797 44138857 ~ 44139077 (-)
G893201 NA non-coding downstream 34351 44138311 ~ 44138523 (-)
G893175 NA non-coding downstream 90432 44082230 ~ 44082442 (-)
G893228 NA non-coding upstream 1637 44181014 ~ 44181216 (-)
G893229 NA non-coding upstream 1968 44181345 ~ 44181573 (-)
G893230 NA non-coding upstream 2228 44181605 ~ 44181935 (-)
G893120 NA non-coding upstream 17565 44196942 ~ 44197282 (-)
G893126 NA non-coding upstream 18144 44197521 ~ 44197890 (-)
G892965 NA other downstream 461905 43710485 ~ 43710969 (-)
LOC110533962 LOC106603031 other downstream 488954 43681449 ~ 43686604 (-)
LOC110533954 LOC106603192 other downstream 925239 43183815 ~ 43248006 (-)
LOC110533946 mpp1 other downstream 1102716 43057611 ~ 43070230 (-)
G890403 NA other downstream 2094927 42076741 ~ 42077947 (-)
LOC110534000 frmd8 other upstream 126842 44303605 ~ 44308978 (-)
G893541 NA other upstream 589073 44768450 ~ 44769072 (-)
LOC110534025 LOC106603111 other upstream 831952 45011329 ~ 45017446 (-)
LOC110534046 LOC107567170 other upstream 1567938 45747090 ~ 45751405 (-)

Expression


Co-expression Network