mrpl49 (mrpl49)


Basic Information

Item Value
gene id mrpl49
gene name mrpl49
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 44283818 ~ 44285540 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036990393.1
AAAAGGACGTATTTAACTGCGCATACCTATGACGTTGTATTCTCTGATCCCGCCCACGTGTGGTGGTCAAAAGAAACATGTCGCTCCCCTTCATACACAGATCCGCAATGTTGTGCAGAAGATTTAGGGCAAGTTTAAATCTTTGCGATCACACGACAAGGATTCCAAATACTACGATAGGGTTACGAACATTGTGTAGCTCAGTTGGAGAAGCAAATACTGGGATATTACAATCTACAGAAGAATACAAATTTGTGGAACGACTGATCCCACCTTCACGAGTGCCCATTCCCCCTAAACATGACGGCCCTTCCCCATCTGGCTGGACTCCTCCATCAGAGGTACCTCCTGCTTTGCCGTACATGATCCGTCGCTCCCGAATGCACAATGTTCCTGTCTACACAGACCTCACCCATGGCAGCCGCAAGACAACCCTTGTACGCAAGGTTGAAGGGGACATCTGGGCTCTTGAGAAGGATGTTAAGGAGTACCTGCAACAGCTTACTGGCAAAGACCTGCCAACACAGGTCAATGAGGTGACCATGACACTTCGGGTCAAAGGTCACTTTGATACAGAGCTGAAGGAGTGGCTGGTGGAGAAAGGATTCTAACTGGACCGCTGGCGAGGGGGTAAACTGTTGCAGAACAGTTGTCAGAGAAGAAGAGTGCATACTTTTCTACATGAAACCCAACCATTTGAAATGAACCCTGTATTGAAATAGAATAGATAATAAAGAGACAGTTGTTTATTTATGTAGATGTGCTCCATGTCAATTATATTTGTATGGAACACTTTACGCTCAgctgcgtTTTATTGCAATAAAATATCACCATTACCTGT

Function

symbol description
mrpl49 Orthologous to human MRPL49 (mitochondrial ribosomal protein L49).

NR:

description
39S ribosomal protein L49, mitochondrial-like

GO: NA

KEGG:

id description
K17430 MRPL49, NOF1; large subunit ribosomal protein L49

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036990393.1 True 841 mRNA 0.45 5 44283818 44285540

Neighbor

gene id symbol gene type direction distance location
LOC110533994 cnih2 coding upstream 14841 44259513 ~ 44268977 (+)
LOC110533985 LOC106603139 coding upstream 160048 44108333 ~ 44123770 (+)
bscl2 LOC106563482 coding upstream 182962 44097260 ~ 44100856 (+)
LOC110533983 LOC106603147 coding upstream 203622 44077660 ~ 44081410 (+)
LOC110533982 LOC106603146 coding upstream 206706 44067882 ~ 44077112 (+)
LOC110533999 NA coding downstream 1996 44287536 ~ 44288301 (+)
LOC110534002 LOC106603131 coding downstream 34699 44320239 ~ 44325686 (+)
LOC118966633 LOC106603129 coding downstream 44644 44330184 ~ 44340628 (+)
LOC110534003 LOC106603128 coding downstream 60574 44346114 ~ 44349641 (+)
LOC110534004 LOC106563461 coding downstream 65112 44350652 ~ 44377640 (+)
G892132 NA non-coding upstream 13188 44270427 ~ 44270630 (+)
G892073 NA non-coding upstream 29834 44253483 ~ 44253984 (+)
G892128 NA non-coding upstream 36677 44246595 ~ 44247141 (+)
G892125 NA non-coding upstream 42231 44240697 ~ 44241587 (+)
G892114 NA non-coding upstream 43150 44228825 ~ 44240668 (+)
G892157 NA non-coding downstream 16254 44301794 ~ 44304579 (+)
G892185 NA non-coding downstream 112326 44397866 ~ 44398095 (+)
G892208 NA non-coding downstream 201541 44487081 ~ 44487857 (+)
G892245 NA non-coding downstream 204110 44489650 ~ 44489949 (+)
G892187 NA non-coding downstream 316971 44602511 ~ 44603878 (+)
G891951 LOC106603153 other upstream 343261 43938412 ~ 43940557 (+)
G891856 NA other upstream 540328 43742917 ~ 43743490 (+)
LOC110533965 LOC106603163 other upstream 542788 43732222 ~ 43741030 (+)
G891847 NA other upstream 570736 43712545 ~ 43713082 (+)
G892191 NA other downstream 370018 44655558 ~ 44659491 (+)
G892499 LOC106603104 other downstream 723294 45008834 ~ 45010849 (+)
LOC110534033 LOC106603099 other downstream 1268697 45553481 ~ 45592329 (+)
LOC110534042 LOC106603097 other downstream 1336717 45622164 ~ 45654911 (+)
LOC110534056 LOC106603182 other downstream 1615505 45898515 ~ 45901940 (+)

Expression


Co-expression Network