Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110533999 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 44287536 ~ 44288301 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: zinc finger HIT domain-containing protein 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110533999 | True | 766 | mRNA | 0.52 | 1 | 44287536 | 44288301 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mrpl49 | mrpl49 | coding | upstream | 1996 | 44283818 ~ 44285540 (+) |
| LOC110533994 | cnih2 | coding | upstream | 18559 | 44259513 ~ 44268977 (+) |
| LOC110533985 | LOC106603139 | coding | upstream | 163766 | 44108333 ~ 44123770 (+) |
| bscl2 | LOC106563482 | coding | upstream | 186680 | 44097260 ~ 44100856 (+) |
| LOC110533983 | LOC106603147 | coding | upstream | 207340 | 44077660 ~ 44081410 (+) |
| LOC110534002 | LOC106603131 | coding | downstream | 31938 | 44320239 ~ 44325686 (+) |
| LOC118966633 | LOC106603129 | coding | downstream | 41883 | 44330184 ~ 44340628 (+) |
| LOC110534003 | LOC106603128 | coding | downstream | 57813 | 44346114 ~ 44349641 (+) |
| LOC110534004 | LOC106563461 | coding | downstream | 62351 | 44350652 ~ 44377640 (+) |
| LOC110534006 | LOC106603126 | coding | downstream | 113474 | 44401775 ~ 44439475 (+) |
| G892132 | NA | non-coding | upstream | 16906 | 44270427 ~ 44270630 (+) |
| G892073 | NA | non-coding | upstream | 33552 | 44253483 ~ 44253984 (+) |
| G892128 | NA | non-coding | upstream | 40395 | 44246595 ~ 44247141 (+) |
| G892125 | NA | non-coding | upstream | 45949 | 44240697 ~ 44241587 (+) |
| G892114 | NA | non-coding | upstream | 46868 | 44228825 ~ 44240668 (+) |
| G892157 | NA | non-coding | downstream | 13493 | 44301794 ~ 44304579 (+) |
| G892185 | NA | non-coding | downstream | 109565 | 44397866 ~ 44398095 (+) |
| G892208 | NA | non-coding | downstream | 198780 | 44487081 ~ 44487857 (+) |
| G892245 | NA | non-coding | downstream | 201349 | 44489650 ~ 44489949 (+) |
| G892187 | NA | non-coding | downstream | 314210 | 44602511 ~ 44603878 (+) |
| G891951 | LOC106603153 | other | upstream | 346979 | 43938412 ~ 43940557 (+) |
| G891856 | NA | other | upstream | 544046 | 43742917 ~ 43743490 (+) |
| LOC110533965 | LOC106603163 | other | upstream | 546506 | 43732222 ~ 43741030 (+) |
| G891847 | NA | other | upstream | 574454 | 43712545 ~ 43713082 (+) |
| G892191 | NA | other | downstream | 367257 | 44655558 ~ 44659491 (+) |
| G892499 | LOC106603104 | other | downstream | 720533 | 45008834 ~ 45010849 (+) |
| LOC110534033 | LOC106603099 | other | downstream | 1265936 | 45553481 ~ 45592329 (+) |
| LOC110534042 | LOC106603097 | other | downstream | 1333956 | 45622164 ~ 45654911 (+) |
| LOC110534056 | LOC106603182 | other | downstream | 1612744 | 45898515 ~ 45901940 (+) |
