LOC118966782


Basic Information

Item Value
gene id LOC118966782
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 44429066 ~ 44429425 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036990396.1
agcagagacagtagtaacagcagcagcagagacagtagtaacagcagcagcagcgacagtggtagcaacagcagcagcagcaacagtagtaacagcagcagcagtgacagtagtaacagcagagacagtagtaacagcagcagcagcgacagtagtaacagcagcagcagcaacagtagtaacagcagcagcagagacagtagtaacagcagagacagtagtaacagcagcagcagcgacagtagtaacagcagcagcgacagtagtaacagcagcagcagagacagtagtaacagcagcagcagtgacagtagtaacagcagcagcgacagtagtaacagcagcagcagcaacagtagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036990396.1 True 360 mRNA 0.51 1 44429066 44429425

Neighbor

gene id symbol gene type direction distance location
LOC110534004 LOC106563461 coding upstream 51426 44350652 ~ 44377640 (+)
LOC110534003 LOC106603128 coding upstream 79425 44346114 ~ 44349641 (+)
LOC118966633 LOC106603129 coding upstream 88438 44330184 ~ 44340628 (+)
LOC110534002 LOC106603131 coding upstream 103380 44320239 ~ 44325686 (+)
LOC110533999 NA coding upstream 140765 44287536 ~ 44288301 (+)
LOC110534007 LOC106603127 coding downstream 19699 44449124 ~ 44465380 (+)
LOC110534009 NA coding downstream 38180 44467605 ~ 44477275 (+)
LOC110533118 LOC106563456 coding downstream 47661 44477086 ~ 44479144 (+)
LOC110534008 LOC106603125 coding downstream 64733 44494158 ~ 44503554 (+)
LOC110534011 LOC106603123 coding downstream 97237 44526662 ~ 44573870 (+)
G892185 NA non-coding upstream 30971 44397866 ~ 44398095 (+)
G892157 NA non-coding upstream 124487 44301794 ~ 44304579 (+)
G892132 NA non-coding upstream 158436 44270427 ~ 44270630 (+)
G892073 NA non-coding upstream 175082 44253483 ~ 44253984 (+)
G892128 NA non-coding upstream 181925 44246595 ~ 44247141 (+)
G892208 NA non-coding downstream 57656 44487081 ~ 44487857 (+)
G892245 NA non-coding downstream 60225 44489650 ~ 44489949 (+)
G892187 NA non-coding downstream 173086 44602511 ~ 44603878 (+)
G892279 NA non-coding downstream 179512 44608937 ~ 44609138 (+)
G892281 NA non-coding downstream 180633 44610058 ~ 44610311 (+)
LOC110533983 LOC106603147 other upstream 347656 44077660 ~ 44081410 (+)
G891951 LOC106603153 other upstream 488509 43938412 ~ 43940557 (+)
G891856 NA other upstream 685576 43742917 ~ 43743490 (+)
LOC110533965 LOC106603163 other upstream 688036 43732222 ~ 43741030 (+)
G891847 NA other upstream 715984 43712545 ~ 43713082 (+)
G892191 NA other downstream 226133 44655558 ~ 44659491 (+)
G892499 LOC106603104 other downstream 579409 45008834 ~ 45010849 (+)
LOC110534033 LOC106603099 other downstream 1124812 45553481 ~ 45592329 (+)
LOC110534042 LOC106603097 other downstream 1192832 45622164 ~ 45654911 (+)
LOC110534056 LOC106603182 other downstream 1471620 45898515 ~ 45901940 (+)

Expression


Co-expression Network