LOC110534008 (LOC106603125)


Basic Information

Item Value
gene id LOC110534008
gene name LOC106603125
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 44494158 ~ 44503554 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021618628.2
ACTACTTGCGCGCTTCTACATTGTACGTTCGCAGATGACCAAAATGGCGGATTCGTCGGTCGATGTTGTCGAGGGCTGTAGGCTCCCTGTTCTCCGAAAAAATCAGGAAAACGAAGATGAGTGGCCCTTGGCTGAAATTCTCAGTGTGAAAGAGATCCCTGGGAGAAAACTCTACTATGTCCACTATATTGACTTCAACAAGCGTCTGGATGAGTGGGTTACGCCGGACAGGCTTGACATGAAGAAGCTCCAGTTCCCTAAGAAGGAAGCTAAAACGCCCACTAAGAACGGGCTTCCGGGGTCGCGGCCCAGCTCCCCGGAGAGCGAAGTGGTAAGAGTGGCCGGAGCTGGCCCCCAACATACCCCCAGCAGGCCCCCACAGCCGCAAGCCCAGCAGAAGTCTATACCCACCAAAACTTCTCTACCAGACTTTCAAGTGTTGCAACAACAAGCTCAGAGGAAGAGTCTAGACCTCAACCTTCAAACTGCCACAGCTCCTTCCAGAGGCAAAACTCTCCCCACGCCGAAGAGGAAAGCAGAGTCTGTGTCCCTGGCAACACAAGTGTCCCCGGCAACCCCCGTGCCATCCTTGCCAGGTTTGGCTGAAGCCTCCCAGGCATCTGTTTACCCTGCTGTAAGGGACACCAACACCTTCAACCTCAAATCCAACGCCCGCGATGACCATGAGCAGCTTACCTCTCTCACTACGAATGGTACTGCCCGTCGCCCCATGCCCAATCAGCCAGGCAGGAAGAGGAAGCAGCCTCCCAACTGCGGGGGAACCGATGAGATAATAAAGGTTTTCCAGTATAACAACAGCCCTCGATGTGCCAATGTCTATCTGCAGCCAGGAGAGGACTCGCAGGACAGCTCTGATGGCATCCCCTCCACCCCTCGCATGACTGGCAGTCTGGTGTCGGACCGTAGCCATGACGACATTGTCACGCGTATGAAGAACATTGACTGCATTGAACTGGGCCGCCACAGGCTGAAGCCCTGGTACTTCTCGCCCTACCCACAGGAACTGACCACATTGCCTATTCTCTACCTCTGTGAGTTCTGCTTGAAGTACCTCAAGAGCCTCAAGTGTCTGCAGAGGCATCTGACCAAGTGTAATCTTCGGCATCCACCTGGCAATGAGATCTACCGCAAGGGCACCATCTCCTTTTTTGAAATAGATGGCAGAAAAAACAAAACATACTCTCAGAACCTGTGTTTACTGGCCAAGTGTTTCCTGGACCACAAGACGCTGTACTATGACACAGACCCCTTCCTCTTCTACGTCATGACAGAGTACGACTCCAAGGGCTTCCACATAGTGGGCTACTTCTCCAAGGAGAAAGAGTCAACGGAAGATTACAACGTGGCCTGTATCCTCACCTTACCTCCCTACCAGCGGAGAGGCTACGGCAAATTGCTCATTGAGTTCAGTTATGAGCTGTCTAAGGTAGAGGGGAAGACGGGCACACCAGagaagcctctgtctgacctgggGCTGCTCTCCTACCGCTCCTACTGGTCCCAGACCATCCTGGAGATACTCATGGACCTCAAGCCTGACAACGGGGAGCGGCCGCAGATCACCATCAATGACATCAGCGAGATCACCAGTGTGAAGAAAGAGGATGTCATATCTACACTTCAGTACCTTAACCTAATTAACTACTATAAGGGCCAGTATATCCTGACTCTTTCGGAGGACATAGTGGAGGGGCATGAGAGGGCAATGCAGAAGCGTCACCTGCGCATTGACTCCAAATGCCTTCACTTCACCCCCAAGGACTGGAGCAAGAGGGGCAAGTGGTAGGACCCTATCTGGTTCTcctggtctctctttctctcttaccgCATACTTTCCTGAAGCACTCCGGGTGAAGAGCACCACGCAGGTCTCCCCAGAGAGGATCAAAGATTTAAAAATGAACAAGAACTGTGTTTATATACAGCATCATTTTTTTGAATCATGTCCATCCTCCTATTGCCCTCACCAGATTCTCTGTCATTAGCAACAGTAGATCCATTTGCTTAGTCTCAGTAGTAGGATTTGTCATCTATTAATGTTGGATAGATGACTCCTACCGTCTGTTTCTTTGCCTTCCTGGCATTTGTTTTACTCCGCTTTCAACACTCTTGGACTAGTCAGTAATTAGTTAGTTATTTTTCACCTACATAAGCACATAATACTATTATTGTTTTGGATGTGATCTTGAATAATGACTGCACATATCCACAGTCTCATTGATCCTAAGCACTATGAGAATTACAGATCTAACCCCTAACTGCTTGTGACCAGTAGTAATTGTATATACTGtgatatactgttttataaaggATTTTTAAGGTGTGATGCATTTCTGTATGTTAAAAGAGATGTGCGGGGATGCTCAGTACAGAAAATAAGCCATGTTGAACTCTTACAAGAATGTATATTTGGATACCTCTACAGTTGtttgtcctttaaaaaaaatggaatgtaAACTAACACGTTTGGCACAATAGCGTGTCATTTAATTTAATGAGACTATTTactgtacatttgtgtgtgttcatttgtAACAAGTGATTCATACTTTGTTATTGTGGTCAATGGTTAGACAGCTATTCTATTTCCCTTCATATTTAAGTGTAAATTCTACATGGAGTCATCTTCTCTTTGTAAGTGGTTTAGAGTTAAGGAATGGGTGAATCAAATTGTTGAATTAGATGTTTGGCTATATATTGAAAAAGACTATAAATCTGACCAACAGATGGGATTTGATATAAGAGCCTTACAGAGAGATGGCTTTACACATCTAATAAACCAGGACACTTTTACTGTGTTTCATGGCTTTAATGAGTTCTCAAATGATAAAATCTGACTGAGTTGTCATCACTCACATGGAGAAATATGTTGTTTTTTAAAGTTTCGTCCATGTCATTCCCCTGAATGTCCTCATTTGACTGAAAAGGAAGTCAAAACAACATAGTTTAGGAACTGAATCAAAGATCTATTCCTGGGCTGTTTATACATTCTTAGGCAGCAGACACGTACATTTATATGGAAGTAAAATGTATCTAGTGTGCTCTGCTGTCTTTGTATACAAAGAAAAGAAGCTTAGTCTCTTACCTCTTTCCATACTTGTCACTTTAGGTAAATTTGAGTTACTCAATTTCATAGAATGAACTCCTCTCGTCTGTGGTTTACTGGAGCTTTACAGGCAGGTAACGTGAAGGGGAGTCAGTTCGGTCTTATGCCTATTGGTTGCATTTAGCCTCGTCCACGTGCTATGTGGGAGCCTTTTGAAATTGTAGGACCGACCTAACTTCTTCATTGACTGCATGTCGTCCTCATATAAGCTcagaaaaaaaataaacgtcctctcactgtc
>XM_021618629.2
ACTACTTGCGCGCTTCTACATTGTACGTTCGCAGATGACCAAAATGGCGGATTCGTCGGTCGATGTTGTCGAGGGCTGTAGGCTCCCTGTTCTCCGAAAAAATCAGGAAAACGAAGATGAGTGGCCCTTGGCTGAAATTCTCAGTGTGAAAGAGATCCCTGGGAGAAAACTCTACTATGTCCACTATATTGACTTCAACAAGCGTCTGGATGAGTGGGTTACGCCGGACAGGCTTGACATGAAGAAGCTCCAGTTCCCTAAGAAGGAAGCTAAAACGCCCACTAAGAACGGGCTTCCGGGGTCGCGGCCCAGCTCCCCGGAGAGCGAAGTGGTAAGAGTGGCCGGAGCTGGCCCCCAACATACCCCCAGCAGGCCCCCACAGCCGCAAGCCCAGCAGAAGTCTATACCCACCAAAACTTCTCTACCAGACTTTCAAGTGTTGCAACAACAAGCTCAGAGGAAGAGTCTAGACCTCAACCTTCAAACTGCCACAGCTCCTTCCAGAGGCAAAACTCTCCCCACGCCGAAGAGGAAAGCAGAGTCTGTGTCCCTGGCAACACAAGTGTCCCCGGCAACCCCCGTGCCATCCTTGCCAGGTTTGGCTGAAGCCTCCCAGGCATCTGTTTACCCTGCTGTAAGGGACACCAACACCTTCAACCTCAAATCCAACGCCCGCGATGACCATGAGCAGCTTACCTCTCTCACTACGAATGGTACTGCCCGTCGCCCCATGCCCAATCAGCCAGGCAGGAAGAGGAAGCAGCCTCCCAACTGCGGGGGAACCGATGAGGACTCGCAGGACAGCTCTGATGGCATCCCCTCCACCCCTCGCATGACTGGCAGTCTGGTGTCGGACCGTAGCCATGACGACATTGTCACGCGTATGAAGAACATTGACTGCATTGAACTGGGCCGCCACAGGCTGAAGCCCTGGTACTTCTCGCCCTACCCACAGGAACTGACCACATTGCCTATTCTCTACCTCTGTGAGTTCTGCTTGAAGTACCTCAAGAGCCTCAAGTGTCTGCAGAGGCATCTGACCAAGTGTAATCTTCGGCATCCACCTGGCAATGAGATCTACCGCAAGGGCACCATCTCCTTTTTTGAAATAGATGGCAGAAAAAACAAAACATACTCTCAGAACCTGTGTTTACTGGCCAAGTGTTTCCTGGACCACAAGACGCTGTACTATGACACAGACCCCTTCCTCTTCTACGTCATGACAGAGTACGACTCCAAGGGCTTCCACATAGTGGGCTACTTCTCCAAGGAGAAAGAGTCAACGGAAGATTACAACGTGGCCTGTATCCTCACCTTACCTCCCTACCAGCGGAGAGGCTACGGCAAATTGCTCATTGAGTTCAGTTATGAGCTGTCTAAGGTAGAGGGGAAGACGGGCACACCAGagaagcctctgtctgacctgggGCTGCTCTCCTACCGCTCCTACTGGTCCCAGACCATCCTGGAGATACTCATGGACCTCAAGCCTGACAACGGGGAGCGGCCGCAGATCACCATCAATGACATCAGCGAGATCACCAGTGTGAAGAAAGAGGATGTCATATCTACACTTCAGTACCTTAACCTAATTAACTACTATAAGGGCCAGTATATCCTGACTCTTTCGGAGGACATAGTGGAGGGGCATGAGAGGGCAATGCAGAAGCGTCACCTGCGCATTGACTCCAAATGCCTTCACTTCACCCCCAAGGACTGGAGCAAGAGGGGCAAGTGGTAGGACCCTATCTGGTTCTcctggtctctctttctctcttaccgCATACTTTCCTGAAGCACTCCGGGTGAAGAGCACCACGCAGGTCTCCCCAGAGAGGATCAAAGATTTAAAAATGAACAAGAACTGTGTTTATATACAGCATCATTTTTTTGAATCATGTCCATCCTCCTATTGCCCTCACCAGATTCTCTGTCATTAGCAACAGTAGATCCATTTGCTTAGTCTCAGTAGTAGGATTTGTCATCTATTAATGTTGGATAGATGACTCCTACCGTCTGTTTCTTTGCCTTCCTGGCATTTGTTTTACTCCGCTTTCAACACTCTTGGACTAGTCAGTAATTAGTTAGTTATTTTTCACCTACATAAGCACATAATACTATTATTGTTTTGGATGTGATCTTGAATAATGACTGCACATATCCACAGTCTCATTGATCCTAAGCACTATGAGAATTACAGATCTAACCCCTAACTGCTTGTGACCAGTAGTAATTGTATATACTGtgatatactgttttataaaggATTTTTAAGGTGTGATGCATTTCTGTATGTTAAAAGAGATGTGCGGGGATGCTCAGTACAGAAAATAAGCCATGTTGAACTCTTACAAGAATGTATATTTGGATACCTCTACAGTTGtttgtcctttaaaaaaaatggaatgtaAACTAACACGTTTGGCACAATAGCGTGTCATTTAATTTAATGAGACTATTTactgtacatttgtgtgtgttcatttgtAACAAGTGATTCATACTTTGTTATTGTGGTCAATGGTTAGACAGCTATTCTATTTCCCTTCATATTTAAGTGTAAATTCTACATGGAGTCATCTTCTCTTTGTAAGTGGTTTAGAGTTAAGGAATGGGTGAATCAAATTGTTGAATTAGATGTTTGGCTATATATTGAAAAAGACTATAAATCTGACCAACAGATGGGATTTGATATAAGAGCCTTACAGAGAGATGGCTTTACACATCTAATAAACCAGGACACTTTTACTGTGTTTCATGGCTTTAATGAGTTCTCAAATGATAAAATCTGACTGAGTTGTCATCACTCACATGGAGAAATATGTTGTTTTTTAAAGTTTCGTCCATGTCATTCCCCTGAATGTCCTCATTTGACTGAAAAGGAAGTCAAAACAACATAGTTTAGGAACTGAATCAAAGATCTATTCCTGGGCTGTTTATACATTCTTAGGCAGCAGACACGTACATTTATATGGAAGTAAAATGTATCTAGTGTGCTCTGCTGTCTTTGTATACAAAGAAAAGAAGCTTAGTCTCTTACCTCTTTCCATACTTGTCACTTTAGGTAAATTTGAGTTACTCAATTTCATAGAATGAACTCCTCTCGTCTGTGGTTTACTGGAGCTTTACAGGCAGGTAACGTGAAGGGGAGTCAGTTCGGTCTTATGCCTATTGGTTGCATTTAGCCTCGTCCACGTGCTATGTGGGAGCCTTTTGAAATTGTAGGACCGACCTAACTTCTTCATTGACTGCATGTCGTCCTCATATAAGCTcagaaaaaaaataaacgtcctctcactgtc

Function

NR:

description
histone acetyltransferase KAT5-like isoform X2

GO: NA

KEGG:

id description
K11304 TIP60, KAT5, ESA1; histone acetyltransferase HTATIP

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021618628.2 False 3368 mRNA 0.46 15 44494158 44503554
XM_021618629.2 True 3302 mRNA 0.46 14 44494158 44503554

Neighbor

gene id symbol gene type direction distance location
LOC110533118 LOC106563456 coding upstream 15014 44477086 ~ 44479144 (+)
LOC110534009 NA coding upstream 16883 44467605 ~ 44477275 (+)
LOC110534007 LOC106603127 coding upstream 28778 44449124 ~ 44465380 (+)
LOC110534006 LOC106603126 coding upstream 54683 44401775 ~ 44439475 (+)
LOC118966782 NA coding upstream 64733 44429066 ~ 44429425 (+)
LOC110534011 LOC106603123 coding downstream 23108 44526662 ~ 44573870 (+)
LOC110534013 LOC106603121 coding downstream 71377 44574931 ~ 44601953 (+)
LOC110534014 LOC106603122 coding downstream 110290 44613844 ~ 44622676 (+)
LOC110534018 LOC106603117 coding downstream 261677 44765231 ~ 44767832 (+)
LOC110534023 LOC106603103 coding downstream 489732 44993286 ~ 45003089 (+)
G892245 NA non-coding upstream 4209 44489650 ~ 44489949 (+)
G892208 NA non-coding upstream 6301 44487081 ~ 44487857 (+)
G892185 NA non-coding upstream 96063 44397866 ~ 44398095 (+)
G892157 NA non-coding upstream 189579 44301794 ~ 44304579 (+)
G892132 NA non-coding upstream 223528 44270427 ~ 44270630 (+)
G892187 NA non-coding downstream 98957 44602511 ~ 44603878 (+)
G892279 NA non-coding downstream 105383 44608937 ~ 44609138 (+)
G892281 NA non-coding downstream 106504 44610058 ~ 44610311 (+)
G892283 NA non-coding downstream 112571 44616125 ~ 44616340 (+)
G892284 NA non-coding downstream 114170 44617724 ~ 44617966 (+)
LOC110533983 LOC106603147 other upstream 412748 44077660 ~ 44081410 (+)
G891951 LOC106603153 other upstream 553601 43938412 ~ 43940557 (+)
G891856 NA other upstream 750668 43742917 ~ 43743490 (+)
LOC110533965 LOC106603163 other upstream 753128 43732222 ~ 43741030 (+)
G891847 NA other upstream 781076 43712545 ~ 43713082 (+)
G892191 NA other downstream 152004 44655558 ~ 44659491 (+)
G892499 LOC106603104 other downstream 505280 45008834 ~ 45010849 (+)
LOC110534033 LOC106603099 other downstream 1050683 45553481 ~ 45592329 (+)
LOC110534042 LOC106603097 other downstream 1118703 45622164 ~ 45654911 (+)
LOC110534056 LOC106603182 other downstream 1397491 45898515 ~ 45901940 (+)

Expression


Co-expression Network